RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 ANGEL2Q5VTE6 544 aaKnown RBP12.97□□□□□ -0.33
R3HDM2-210ENST00000547019 PRAMEF18Q5VWM3 479 aa12.97□□□□□ -0.33
R3HDM2-210ENST00000547019 PPP1R42Q7Z4L9 355 aa12.97□□□□□ -0.33
R3HDM2-210ENST00000547019 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
R3HDM2-210ENST00000547019 ZNF428Q96B54 188 aa12.97□□□□□ -0.33
R3HDM2-210ENST00000547019 THUMPD2Q9BTF0 503 aaKnown RBP12.97□□□□□ -0.33
R3HDM2-210ENST00000547019 TMX4Q9H1E5 349 aaPredicted RBP12.97□□□□□ -0.33
R3HDM2-210ENST00000547019 POLLQ9UGP5 575 aa12.97□□□□□ -0.33
R3HDM2-210ENST00000547019 UBE2Q2LH0YL09 131 aa12.96□□□□□ -0.33
R3HDM2-210ENST00000547019 RIMBP2O15034 1052 aa12.96□□□□□ -0.33
R3HDM2-210ENST00000547019 FKTNO75072 461 aa12.96□□□□□ -0.33
R3HDM2-210ENST00000547019 EN2P19622 333 aaPredicted RBP12.96□□□□□ -0.33
R3HDM2-210ENST00000547019 RPS12P25398 132 aaKnown RBP12.96□□□□□ -0.33
R3HDM2-210ENST00000547019 TM4SF4P48230 202 aa12.96□□□□□ -0.33
R3HDM2-210ENST00000547019 CAP1Q01518 475 aa12.96□□□□□ -0.33
R3HDM2-210ENST00000547019 DOK7Q18PE1 504 aa12.96□□□□□ -0.33
R3HDM2-210ENST00000547019 WASHC4Q2M389 1173 aa12.96□□□□□ -0.33
R3HDM2-210ENST00000547019 PARP10Q53GL7 1025 aa12.96□□□□□ -0.33
R3HDM2-210ENST00000547019 UTP14AQ9BVJ6 771 aaKnown RBP12.96□□□□□ -0.33
R3HDM2-210ENST00000547019 ZNF609O15014 1411 aa12.96□□□□□ -0.34
R3HDM2-210ENST00000547019 ZSWIM8A7E2V4 1837 aa12.95□□□□□ -0.34
R3HDM2-210ENST00000547019 DLL1O00548 723 aa12.95□□□□□ -0.34
R3HDM2-210ENST00000547019 PROSER3Q2NL68 480 aa12.95□□□□□ -0.34
R3HDM2-210ENST00000547019 OTOP1Q7RTM1 612 aa12.95□□□□□ -0.34
R3HDM2-210ENST00000547019 CFHR5Q9BXR6 569 aa12.95□□□□□ -0.34
R3HDM2-210ENST00000547019 ANXA1P04083 346 aa12.94□□□□□ -0.34
R3HDM2-210ENST00000547019 VIL1P09327 827 aaKnown RBP12.94□□□□□ -0.34
R3HDM2-210ENST00000547019 EIF4A1P60842 406 aaKnown RBP12.94□□□□□ -0.34
R3HDM2-210ENST00000547019 FKBP1BP68106 108 aa12.94□□□□□ -0.34
R3HDM2-210ENST00000547019 GPSM2P81274 684 aa12.94□□□□□ -0.34
R3HDM2-210ENST00000547019 SCARF1Q14162 830 aa12.94□□□□□ -0.34
R3HDM2-210ENST00000547019 PDIA6Q15084 440 aa12.94□□□□□ -0.34
R3HDM2-210ENST00000547019 TAF7Q15545 349 aaPredicted RBP12.94□□□□□ -0.34
R3HDM2-210ENST00000547019 RTF1Q92541 710 aaKnown RBP12.94□□□□□ -0.34
R3HDM2-210ENST00000547019 CELF1Q92879 486 aaKnown RBP12.94□□□□□ -0.34
R3HDM2-210ENST00000547019 NEFMP07197 916 aa12.93□□□□□ -0.34
R3HDM2-210ENST00000547019 ZNF280AP59817 542 aaPredicted RBP12.93□□□□□ -0.34
R3HDM2-210ENST00000547019 WDR43Q15061 677 aaKnown RBP eCLIP12.93□□□□□ -0.34
R3HDM2-210ENST00000547019 DDX46Q7L014 1031 aaKnown RBP12.93□□□□□ -0.34
R3HDM2-210ENST00000547019 NLRP10Q86W26 655 aa12.93□□□□□ -0.34
R3HDM2-210ENST00000547019 TRIM17Q9Y577 477 aa12.93□□□□□ -0.34
R3HDM2-210ENST00000547019 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
R3HDM2-210ENST00000547019 NSFL1CQ9UNZ2 370 aaKnown RBP12.92□□□□□ -0.34
R3HDM2-210ENST00000547019 OTOFQ9HC10 1997 aa12.92□□□□□ -0.34
R3HDM2-210ENST00000547019 SPEF2Q9C093 1822 aa12.92□□□□□ -0.34
R3HDM2-210ENST00000547019 MAPK8IP3Q9UPT6 1336 aa12.91□□□□□ -0.34
R3HDM2-210ENST00000547019 CUL9Q8IWT3 2517 aa12.91□□□□□ -0.34
R3HDM2-210ENST00000547019 LAMA3Q16787 3333 aa12.91□□□□□ -0.34
R3HDM2-210ENST00000547019 GMLQ99445 158 aa12.91□□□□□ -0.34
R3HDM2-210ENST00000547019 PITPNM2Q9BZ72 1349 aa12.9□□□□□ -0.34
R3HDM2-210ENST00000547019 C6orf229H3BNL8 230 aa12.9□□□□□ -0.34
R3HDM2-210ENST00000547019 TBC1D16Q8TBP0 767 aa12.9□□□□□ -0.34
R3HDM2-210ENST00000547019 ARMC5Q96C12 935 aa12.9□□□□□ -0.34
R3HDM2-210ENST00000547019 FZD1Q9UP38 647 aa12.9□□□□□ -0.34
R3HDM2-210ENST00000547019 H0YGN5 161 aa12.89□□□□□ -0.35
R3HDM2-210ENST00000547019 HTATSF1O43719 755 aaKnown RBP12.89□□□□□ -0.35
R3HDM2-210ENST00000547019 PTPN12Q05209 780 aaKnown RBP12.89□□□□□ -0.35
R3HDM2-210ENST00000547019 INTS3Q68E01 1043 aaKnown RBP12.89□□□□□ -0.35
R3HDM2-210ENST00000547019 PNNQ9H307 717 aaKnown RBP12.89□□□□□ -0.35
R3HDM2-210ENST00000547019 MYOZ2Q9NPC6 264 aa12.89□□□□□ -0.35
R3HDM2-210ENST00000547019 PTPN22Q9Y2R2 807 aa12.89□□□□□ -0.35
R3HDM2-210ENST00000547019 SSC5DA1L4H1 1573 aa12.89□□□□□ -0.35
R3HDM2-210ENST00000547019 ERBB4Q15303 1308 aa12.88□□□□□ -0.35
R3HDM2-210ENST00000547019 SH3TC1Q8TE82 1336 aa12.88□□□□□ -0.35
R3HDM2-210ENST00000547019 ECM29Q5VYK3 1845 aa12.88□□□□□ -0.35
R3HDM2-210ENST00000547019 IGF2BP3O00425 579 aaKnown RBP eCLIP12.88□□□□□ -0.35
R3HDM2-210ENST00000547019 SREBF2Q12772 1141 aa12.88□□□□□ -0.35
R3HDM2-210ENST00000547019 NBPF9Q3BBW0 867 aa12.88□□□□□ -0.35
R3HDM2-210ENST00000547019 RSBN1LQ6PCB5 846 aaPredicted RBP12.88□□□□□ -0.35
R3HDM2-210ENST00000547019 TMC4Q7Z404 712 aa12.88□□□□□ -0.35
R3HDM2-210ENST00000547019 CD99L2Q8TCZ2 262 aa12.88□□□□□ -0.35
R3HDM2-210ENST00000547019 MRS2Q9HD23 443 aa12.88□□□□□ -0.35
R3HDM2-210ENST00000547019 TRMT112Q9UI30 125 aaKnown RBP12.88□□□□□ -0.35
R3HDM2-210ENST00000547019 CCDC184Q52MB2 194 aa12.87□□□□□ -0.35
R3HDM2-210ENST00000547019 SPRYD7Q5W111 196 aa12.87□□□□□ -0.35
R3HDM2-210ENST00000547019 UNC80Q8N2C7 3258 aa12.87□□□□□ -0.35
R3HDM2-210ENST00000547019 PRKG1Q13976 671 aa12.86□□□□□ -0.35
R3HDM2-210ENST00000547019 TTLL12Q14166 644 aaPredicted RBP12.86□□□□□ -0.35
R3HDM2-210ENST00000547019 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
R3HDM2-210ENST00000547019 IFNL1Q8IU54 200 aa12.86□□□□□ -0.35
R3HDM2-210ENST00000547019 SLC17A8Q8NDX2 589 aa12.86□□□□□ -0.35
R3HDM2-210ENST00000547019 AGBL3Q8NEM8 1001 aa12.86□□□□□ -0.35
R3HDM2-210ENST00000547019 ZNF333Q96JL9 665 aa12.86□□□□□ -0.35
R3HDM2-210ENST00000547019 PLEKHF1Q96S99 279 aa12.86□□□□□ -0.35
R3HDM2-210ENST00000547019 MXD3Q9BW11 206 aa12.86□□□□□ -0.35
R3HDM2-210ENST00000547019 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
R3HDM2-210ENST00000547019 CCDC146Q8IYE0 955 aa12.85□□□□□ -0.35
R3HDM2-210ENST00000547019 XAGE3Q8WTP9 111 aa12.85□□□□□ -0.35
R3HDM2-210ENST00000547019 EYA3Q99504 573 aa12.85□□□□□ -0.35
R3HDM2-210ENST00000547019 WTIPA6NIX2 430 aaPredicted RBP12.84□□□□□ -0.35
R3HDM2-210ENST00000547019 WNT10BO00744 389 aa12.84□□□□□ -0.35
R3HDM2-210ENST00000547019 UFL1O94874 794 aa12.84□□□□□ -0.35
R3HDM2-210ENST00000547019 USP17L8P0C7I0 530 aa12.84□□□□□ -0.35
R3HDM2-210ENST00000547019 EIF2S2P20042 333 aaKnown RBP12.84□□□□□ -0.35
R3HDM2-210ENST00000547019 AIMP1Q12904 312 aaKnown RBP12.84□□□□□ -0.35
R3HDM2-210ENST00000547019 TCIRG1Q13488 830 aa12.84□□□□□ -0.35
R3HDM2-210ENST00000547019 SF3B3Q15393 1217 aaKnown RBP12.84□□□□□ -0.35
R3HDM2-210ENST00000547019 NFE2L2Q16236 605 aa12.84□□□□□ -0.35
R3HDM2-210ENST00000547019 LDLRAD1Q5T700 205 aa12.84□□□□□ -0.35
R3HDM2-210ENST00000547019 COPS6Q7L5N1 327 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms