RNA–Protein interactions for RNA: ENST00000546592.1

GPN3-204, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 638 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-204ENST00000546592 XDHP47989 1333 aa24.05■■□□□ 1.44
GPN3-204ENST00000546592 SNED1Q8TER0 1413 aa24.04■■□□□ 1.44
GPN3-204ENST00000546592 LMNB1P20700 586 aa24.04■■□□□ 1.44
GPN3-204ENST00000546592 RFX5P48382 616 aaPredicted RBP24.04■■□□□ 1.44
GPN3-204ENST00000546592 ATP8B2P98198 1209 aa24.04■■□□□ 1.44
GPN3-204ENST00000546592 SLC51AQ86UW1 340 aa24.04■■□□□ 1.44
GPN3-204ENST00000546592 PODXL2Q9NZ53 605 aa24.04■■□□□ 1.44
GPN3-204ENST00000546592 PTPN12Q05209 780 aaKnown RBP24.03■■□□□ 1.44
GPN3-204ENST00000546592 CRBNQ96SW2 442 aa24.03■■□□□ 1.44
GPN3-204ENST00000546592 RTFDC1Q9BY42 306 aaPredicted RBP24.03■■□□□ 1.44
GPN3-204ENST00000546592 GGA1Q9UJY5 639 aa24.03■■□□□ 1.44
GPN3-204ENST00000546592 FBXO3Q9UK99 471 aa24.03■■□□□ 1.44
GPN3-204ENST00000546592 SPEF2Q9C093 1822 aa24.03■■□□□ 1.44
GPN3-204ENST00000546592 C6orf229H3BNL8 230 aa24.02■■□□□ 1.44
GPN3-204ENST00000546592 ATP2B4P23634 1241 aa24.02■■□□□ 1.44
GPN3-204ENST00000546592 CHRNDQ07001 517 aa24.02■■□□□ 1.44
GPN3-204ENST00000546592 CEP85Q6P2H3 762 aa24.02■■□□□ 1.44
GPN3-204ENST00000546592 KLHDC4Q8TBB5 520 aa24.02■■□□□ 1.44
GPN3-204ENST00000546592 VPS33BQ9H267 617 aa24.02■■□□□ 1.44
GPN3-204ENST00000546592 ZNF277Q9NRM2 450 aaPredicted RBP24.02■■□□□ 1.44
GPN3-204ENST00000546592 PNMA6EA0A0J9YXQ4 647 aa24.01■■□□□ 1.43
GPN3-204ENST00000546592 EYA2O00167 538 aa24.01■■□□□ 1.43
GPN3-204ENST00000546592 RPAP2Q8IXW5 612 aaPredicted RBP24.01■■□□□ 1.43
GPN3-204ENST00000546592 EYA3Q99504 573 aa24.01■■□□□ 1.43
GPN3-204ENST00000546592 COPRSQ9NQ92 184 aa24.01■■□□□ 1.43
GPN3-204ENST00000546592 RNF181Q9P0P0 153 aa24.01■■□□□ 1.43
GPN3-204ENST00000546592 MROH5Q6ZUA9 1318 aa24.01■■□□□ 1.43
GPN3-204ENST00000546592 CIAO1O76071 339 aa24■■□□□ 1.43
GPN3-204ENST00000546592 UFL1O94874 794 aa24■■□□□ 1.43
GPN3-204ENST00000546592 IARSP41252 1262 aaKnown RBP24■■□□□ 1.43
GPN3-204ENST00000546592 C9orf131Q5VYM1 1079 aa24■■□□□ 1.43
GPN3-204ENST00000546592 TBC1D16Q8TBP0 767 aa24■■□□□ 1.43
GPN3-204ENST00000546592 SSH3Q8TE77 659 aa24■■□□□ 1.43
GPN3-204ENST00000546592 PUS3Q9BZE2 481 aaKnown RBP24■■□□□ 1.43
GPN3-204ENST00000546592 LEMD3Q9Y2U8 911 aa24■■□□□ 1.43
GPN3-204ENST00000546592 RIPOR2Q9Y4F9 1068 aa24■■□□□ 1.43
GPN3-204ENST00000546592 GOLGB1Q14789 3259 aaKnown RBP23.99■■□□□ 1.43
GPN3-204ENST00000546592 KCNJ4P48050 445 aa23.99■■□□□ 1.43
GPN3-204ENST00000546592 LRRC24Q50LG9 513 aa23.99■■□□□ 1.43
GPN3-204ENST00000546592 METTL24Q5JXM2 366 aa23.99■■□□□ 1.43
GPN3-204ENST00000546592 SIL1Q9H173 461 aa23.99■■□□□ 1.43
GPN3-204ENST00000546592 PPIP5K2O43314 1243 aa23.98■■□□□ 1.43
GPN3-204ENST00000546592 HMMRO75330 724 aa23.98■■□□□ 1.43
GPN3-204ENST00000546592 AAMPQ13685 434 aa23.98■■□□□ 1.43
GPN3-204ENST00000546592 POLA2Q14181 598 aa23.98■■□□□ 1.43
GPN3-204ENST00000546592 WASHC4Q2M389 1173 aa23.98■■□□□ 1.43
GPN3-204ENST00000546592 POLLQ9UGP5 575 aa23.98■■□□□ 1.43
GPN3-204ENST00000546592 PA2G4Q9UQ80 394 aaKnown RBP23.98■■□□□ 1.43
GPN3-204ENST00000546592 LARGE2Q8N3Y3 721 aa23.97■■□□□ 1.43
GPN3-204ENST00000546592 HELBQ8NG08 1087 aaPredicted RBP23.97■■□□□ 1.43
GPN3-204ENST00000546592 ZC3H12CQ9C0D7 883 aaKnown RBP23.97■■□□□ 1.43
GPN3-204ENST00000546592 ZNF804BA4D1E1 1349 aa23.96■■□□□ 1.43
GPN3-204ENST00000546592 IL15P40933 162 aaPredicted RBP23.96■■□□□ 1.43
GPN3-204ENST00000546592 PRELPP51888 382 aa23.96■■□□□ 1.43
GPN3-204ENST00000546592 G3BP1Q13283 466 aaKnown RBP eCLIP23.96■■□□□ 1.43
GPN3-204ENST00000546592 JDP2Q8WYK2 163 aa23.96■■□□□ 1.43
GPN3-204ENST00000546592 DUOX1Q9NRD9 1551 aa23.95■■□□□ 1.43
GPN3-204ENST00000546592 CHD4Q14839 1912 aa23.95■■□□□ 1.42
GPN3-204ENST00000546592 TAF5LO75529 589 aa23.95■■□□□ 1.42
GPN3-204ENST00000546592 KIAA2012Q0VF49 1180 aa23.95■■□□□ 1.42
GPN3-204ENST00000546592 AOC3Q16853 763 aa23.95■■□□□ 1.42
GPN3-204ENST00000546592 LTBP1Q14766 1721 aa23.95■■□□□ 1.42
GPN3-204ENST00000546592 SBF1O95248 1867 aa23.94■■□□□ 1.42
GPN3-204ENST00000546592 ATG9AQ7Z3C6 839 aa23.94■■□□□ 1.42
GPN3-204ENST00000546592 CEP126Q9P2H0 1117 aa23.94■■□□□ 1.42
GPN3-204ENST00000546592 ZC3H4Q9UPT8 1303 aaKnown RBP23.93■■□□□ 1.42
GPN3-204ENST00000546592 G3V3G9 751 aa23.93■■□□□ 1.42
GPN3-204ENST00000546592 RIMBP2O15034 1052 aa23.93■■□□□ 1.42
GPN3-204ENST00000546592 SURF6O75683 361 aaKnown RBP23.93■■□□□ 1.42
GPN3-204ENST00000546592 PDE8BO95263 885 aa23.93■■□□□ 1.42
GPN3-204ENST00000546592 UBE4AQ14139 1066 aa23.93■■□□□ 1.42
GPN3-204ENST00000546592 DCAF8Q5TAQ9 597 aa23.93■■□□□ 1.42
GPN3-204ENST00000546592 NIM1KQ8IY84 436 aa23.93■■□□□ 1.42
GPN3-204ENST00000546592 OS9Q13438 667 aaPredicted RBP23.92■■□□□ 1.42
GPN3-204ENST00000546592 GPR101Q96P66 508 aaPredicted RBP23.92■■□□□ 1.42
GPN3-204ENST00000546592 NOP58Q9Y2X3 529 aaKnown RBP23.92■■□□□ 1.42
GPN3-204ENST00000546592 MED23Q9ULK4 1368 aa23.91■■□□□ 1.42
GPN3-204ENST00000546592 HSP90AB4PQ58FF6 505 aa23.91■■□□□ 1.42
GPN3-204ENST00000546592 VGLL2Q8N8G2 317 aa23.91■■□□□ 1.42
GPN3-204ENST00000546592 EXOC6Q8TAG9 804 aa23.91■■□□□ 1.42
GPN3-204ENST00000546592 CCDC88AQ3V6T2 1871 aa23.91■■□□□ 1.42
GPN3-204ENST00000546592 PUM3Q15397 648 aaKnown RBP23.9■■□□□ 1.42
GPN3-204ENST00000546592 SIRT2Q8IXJ6 389 aa23.9■■□□□ 1.42
GPN3-204ENST00000546592 WTIPA6NIX2 430 aaPredicted RBP23.89■■□□□ 1.41
GPN3-204ENST00000546592 IRX6P78412 446 aaPredicted RBP23.89■■□□□ 1.41
GPN3-204ENST00000546592 DICER1Q9UPY3 1922 aaKnown RBP23.88■■□□□ 1.41
GPN3-204ENST00000546592 SNAP23O00161 211 aa23.88■■□□□ 1.41
GPN3-204ENST00000546592 IFIT1P09914 478 aaKnown RBP23.88■■□□□ 1.41
GPN3-204ENST00000546592 EIF6P56537 245 aaKnown RBP23.88■■□□□ 1.41
GPN3-204ENST00000546592 C15orf52Q6ZUT6 534 aaKnown RBP23.88■■□□□ 1.41
GPN3-204ENST00000546592 ZNRF3Q9ULT6 936 aa23.88■■□□□ 1.41
GPN3-204ENST00000546592 AKAP2Q9Y2D5 859 aa23.88■■□□□ 1.41
GPN3-204ENST00000546592 A0A1B0GUL6 1792 aa23.88■■□□□ 1.41
GPN3-204ENST00000546592 SLC5A1P13866 664 aa23.87■■□□□ 1.41
GPN3-204ENST00000546592 YY1P25490 414 aa23.87■■□□□ 1.41
GPN3-204ENST00000546592 DOK7Q18PE1 504 aa23.87■■□□□ 1.41
GPN3-204ENST00000546592 ERC1Q8IUD2 1116 aa23.87■■□□□ 1.41
GPN3-204ENST00000546592 LPIN2Q92539 896 aa23.87■■□□□ 1.41
GPN3-204ENST00000546592 PCDHB15Q9Y5E8 787 aa23.87■■□□□ 1.41
GPN3-204ENST00000546592 FZD9O00144 591 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms