RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 CYP4F22Q6NT55 531 aa24.04■■□□□ 1.44
CHERP-204ENST00000546538 SAMD7Q7Z3H4 446 aa24.04■■□□□ 1.44
CHERP-204ENST00000546538 DDX58O95786 925 aaKnown RBP24.03■■□□□ 1.44
CHERP-204ENST00000546538 CWF19L2Q2TBE0 894 aaKnown RBP24.03■■□□□ 1.44
CHERP-204ENST00000546538 TWISTNBQ3B726 338 aaPredicted RBP24.03■■□□□ 1.44
CHERP-204ENST00000546538 CCDC152Q4G0S7 254 aa24.03■■□□□ 1.44
CHERP-204ENST00000546538 ZC3H15Q8WU90 426 aaKnown RBP24.03■■□□□ 1.44
CHERP-204ENST00000546538 DPF2Q92785 391 aa24.03■■□□□ 1.44
CHERP-204ENST00000546538 CAPNS2Q96L46 248 aa24.03■■□□□ 1.44
CHERP-204ENST00000546538 CELF2O95319 508 aaKnown RBP24.02■■□□□ 1.44
CHERP-204ENST00000546538 UFL1O94874 794 aa24.01■■□□□ 1.43
CHERP-204ENST00000546538 SAPCD2Q86UD0 394 aa24.01■■□□□ 1.43
CHERP-204ENST00000546538 PRDM10Q9NQV6 1147 aa24.01■■□□□ 1.43
CHERP-204ENST00000546538 IL16Q14005 1332 aa24.01■■□□□ 1.43
CHERP-204ENST00000546538 MYH3P11055 1940 aa24.01■■□□□ 1.43
CHERP-204ENST00000546538 NEURL1BA8MQ27 555 aa24.01■■□□□ 1.43
CHERP-204ENST00000546538 HSPA8P11142 646 aaKnown RBP24.01■■□□□ 1.43
CHERP-204ENST00000546538 CTCFP49711 727 aaPredicted RBP24.01■■□□□ 1.43
CHERP-204ENST00000546538 LBX1P52954 281 aa24.01■■□□□ 1.43
CHERP-204ENST00000546538 CTSWP56202 376 aa24.01■■□□□ 1.43
CHERP-204ENST00000546538 TBC1D10BQ4KMP7 808 aaPredicted RBP24.01■■□□□ 1.43
CHERP-204ENST00000546538 TTLL11Q8NHH1 800 aa24.01■■□□□ 1.43
CHERP-204ENST00000546538 EYA3Q99504 573 aa24.01■■□□□ 1.43
CHERP-204ENST00000546538 MRS2Q9HD23 443 aa24.01■■□□□ 1.43
CHERP-204ENST00000546538 FANCIQ9NVI1 1328 aa24■■□□□ 1.43
CHERP-204ENST00000546538 SPEF2Q9C093 1822 aa24■■□□□ 1.43
CHERP-204ENST00000546538 POLR2AP24928 1970 aaKnown RBP24■■□□□ 1.43
CHERP-204ENST00000546538 H7C1D1 291 aa24■■□□□ 1.43
CHERP-204ENST00000546538 GREM2Q9H772 168 aa24■■□□□ 1.43
CHERP-204ENST00000546538 PSME4Q14997 1843 aa23.99■■□□□ 1.43
CHERP-204ENST00000546538 AOC2O75106 756 aa23.99■■□□□ 1.43
CHERP-204ENST00000546538 SLC4A2P04920 1241 aa23.99■■□□□ 1.43
CHERP-204ENST00000546538 VIL1P09327 827 aaKnown RBP23.99■■□□□ 1.43
CHERP-204ENST00000546538 HSP90B1P14625 803 aaKnown RBP23.99■■□□□ 1.43
CHERP-204ENST00000546538 NCBP3Q53F19 620 aaKnown RBP23.99■■□□□ 1.43
CHERP-204ENST00000546538 AIDAQ96BJ3 306 aa23.99■■□□□ 1.43
CHERP-204ENST00000546538 ANKIB1Q9P2G1 1089 aa23.99■■□□□ 1.43
CHERP-204ENST00000546538 GGA1Q9UJY5 639 aa23.99■■□□□ 1.43
CHERP-204ENST00000546538 GRM1Q13255 1194 aa23.98■■□□□ 1.43
CHERP-204ENST00000546538 CDC37L1Q7L3B6 337 aa23.98■■□□□ 1.43
CHERP-204ENST00000546538 USP48Q86UV5 1035 aa23.98■■□□□ 1.43
CHERP-204ENST00000546538 STK31Q9BXU1 1019 aa23.98■■□□□ 1.43
CHERP-204ENST00000546538 ZC3H12CQ9C0D7 883 aaKnown RBP23.98■■□□□ 1.43
CHERP-204ENST00000546538 ZNF646O15015 1829 aaPredicted RBP23.97■■□□□ 1.43
CHERP-204ENST00000546538 H7C1W4 665 aa23.97■■□□□ 1.43
CHERP-204ENST00000546538 RPS12P25398 132 aaKnown RBP23.97■■□□□ 1.43
CHERP-204ENST00000546538 PAXIP1Q6ZW49 1069 aaPredicted RBP23.97■■□□□ 1.43
CHERP-204ENST00000546538 ANKRD18AQ8IVF6 992 aa23.97■■□□□ 1.43
CHERP-204ENST00000546538 CHMP4AQ9BY43 222 aa23.97■■□□□ 1.43
CHERP-204ENST00000546538 SPINK5Q9NQ38 1064 aaPredicted RBP23.97■■□□□ 1.43
CHERP-204ENST00000546538 ASTN2O75129 1339 aaPredicted RBP23.97■■□□□ 1.43
CHERP-204ENST00000546538 CASP7P55210 303 aa23.96■■□□□ 1.43
CHERP-204ENST00000546538 MAP2K1Q02750 393 aaPredicted RBP23.96■■□□□ 1.43
CHERP-204ENST00000546538 ZNF408Q9H9D4 720 aa23.96■■□□□ 1.43
CHERP-204ENST00000546538 SALL2Q9Y467 1007 aaPredicted RBP23.96■■□□□ 1.43
CHERP-204ENST00000546538 XDHP47989 1333 aa23.96■■□□□ 1.43
CHERP-204ENST00000546538 ZNF609O15014 1411 aa23.96■■□□□ 1.43
CHERP-204ENST00000546538 FLIIQ13045 1269 aa23.95■■□□□ 1.42
CHERP-204ENST00000546538 UBE3BQ7Z3V4 1068 aa23.95■■□□□ 1.42
CHERP-204ENST00000546538 VAMP4O75379 141 aa23.94■■□□□ 1.42
CHERP-204ENST00000546538 ECE1P42892 770 aa23.94■■□□□ 1.42
CHERP-204ENST00000546538 RBM26Q5T8P6 1007 aaKnown RBP23.94■■□□□ 1.42
CHERP-204ENST00000546538 MINPP1Q9UNW1 487 aa23.94■■□□□ 1.42
CHERP-204ENST00000546538 ADM5C9JUS6 153 aa23.93■■□□□ 1.42
CHERP-204ENST00000546538 GMLQ99445 158 aa23.93■■□□□ 1.42
CHERP-204ENST00000546538 ZNF316A6NFI3 1004 aaPredicted RBP23.93■■□□□ 1.42
CHERP-204ENST00000546538 NEXNQ0ZGT2 675 aa23.93■■□□□ 1.42
CHERP-204ENST00000546538 GCKRQ14397 625 aa23.93■■□□□ 1.42
CHERP-204ENST00000546538 HHIPL1Q96JK4 782 aa23.93■■□□□ 1.42
CHERP-204ENST00000546538 ZIC5Q96T25 663 aa23.93■■□□□ 1.42
CHERP-204ENST00000546538 BSDC1Q9NW68 430 aaPredicted RBP23.93■■□□□ 1.42
CHERP-204ENST00000546538 ZNF280AP59817 542 aaPredicted RBP23.92■■□□□ 1.42
CHERP-204ENST00000546538 EXOSC9Q06265 439 aaKnown RBP23.92■■□□□ 1.42
CHERP-204ENST00000546538 KIF4BQ2VIQ3 1234 aa23.92■■□□□ 1.42
CHERP-204ENST00000546538 RSBN1LQ6PCB5 846 aaPredicted RBP23.92■■□□□ 1.42
CHERP-204ENST00000546538 KRT26Q7Z3Y9 468 aa23.92■■□□□ 1.42
CHERP-204ENST00000546538 CDC5LQ99459 802 aaKnown RBP23.92■■□□□ 1.42
CHERP-204ENST00000546538 CACNA1FO60840 1977 aa23.91■■□□□ 1.42
CHERP-204ENST00000546538 ATP2B4P23634 1241 aa23.91■■□□□ 1.42
CHERP-204ENST00000546538 WDR63Q8IWG1 891 aa23.91■■□□□ 1.42
CHERP-204ENST00000546538 PLA2G12BQ9BX93 195 aa23.91■■□□□ 1.42
CHERP-204ENST00000546538 ANP32CO43423 234 aa23.9■■□□□ 1.42
CHERP-204ENST00000546538 MAP2K2P36507 400 aa23.9■■□□□ 1.42
CHERP-204ENST00000546538 TXNRD3Q86VQ6 643 aa23.9■■□□□ 1.42
CHERP-204ENST00000546538 DNAAF4Q8WXU2 420 aa23.9■■□□□ 1.42
CHERP-204ENST00000546538 TSKSQ9UJT2 592 aa23.9■■□□□ 1.42
CHERP-204ENST00000546538 MED23Q9ULK4 1368 aa23.89■■□□□ 1.42
CHERP-204ENST00000546538 FKBP5Q13451 457 aaPredicted RBP23.89■■□□□ 1.41
CHERP-204ENST00000546538 FAM161AQ3B820 660 aa23.89■■□□□ 1.41
CHERP-204ENST00000546538 GGA3Q9NZ52 723 aa23.89■■□□□ 1.41
CHERP-204ENST00000546538 CSF1RP07333 972 aa23.88■■□□□ 1.41
CHERP-204ENST00000546538 KLRK1P26718 216 aa23.88■■□□□ 1.41
CHERP-204ENST00000546538 ZEB1P37275 1124 aaPredicted RBP23.88■■□□□ 1.41
CHERP-204ENST00000546538 AGBL3Q8NEM8 1001 aa23.88■■□□□ 1.41
CHERP-204ENST00000546538 MXD3Q9BW11 206 aa23.88■■□□□ 1.41
CHERP-204ENST00000546538 F6X3S4 739 aa23.87■■□□□ 1.41
CHERP-204ENST00000546538 CCT4P50991 539 aaKnown RBP23.87■■□□□ 1.41
CHERP-204ENST00000546538 LINS1Q8NG48 757 aa23.87■■□□□ 1.41
CHERP-204ENST00000546538 FAM155AB1AL88 458 aaPredicted RBP23.86■■□□□ 1.41
CHERP-204ENST00000546538 G3V3G9 751 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms