RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 DPP8Q6V1X1 898 aaPredicted RBP25.6■■□□□ 1.69
HMGA2-211ENST00000545998 RTFDC1Q9BY42 306 aaPredicted RBP25.6■■□□□ 1.69
HMGA2-211ENST00000545998 C1orf115Q9H7X2 142 aa25.6■■□□□ 1.69
HMGA2-211ENST00000545998 A0A1B0GUL6 1792 aa25.59■■□□□ 1.69
HMGA2-211ENST00000545998 LMNB1P20700 586 aa25.59■■□□□ 1.69
HMGA2-211ENST00000545998 PODXL2Q9NZ53 605 aa25.59■■□□□ 1.69
HMGA2-211ENST00000545998 NSFL1CQ9UNZ2 370 aaKnown RBP25.59■■□□□ 1.69
HMGA2-211ENST00000545998 LDHAL6AQ6ZMR3 332 aa25.58■■□□□ 1.69
HMGA2-211ENST00000545998 ZBTB40Q9NUA8 1239 aa25.58■■□□□ 1.69
HMGA2-211ENST00000545998 KLHDC4Q8TBB5 520 aa25.57■■□□□ 1.68
HMGA2-211ENST00000545998 ZNF277Q9NRM2 450 aaPredicted RBP25.57■■□□□ 1.68
HMGA2-211ENST00000545998 SUPT16HQ9Y5B9 1047 aaKnown RBP25.57■■□□□ 1.68
HMGA2-211ENST00000545998 PTPN12Q05209 780 aaKnown RBP25.56■■□□□ 1.68
HMGA2-211ENST00000545998 C9orf131Q5VYM1 1079 aa25.56■■□□□ 1.68
HMGA2-211ENST00000545998 CHMP4BQ9H444 224 aaKnown RBP25.56■■□□□ 1.68
HMGA2-211ENST00000545998 ANKIB1Q9P2G1 1089 aa25.56■■□□□ 1.68
HMGA2-211ENST00000545998 XDHP47989 1333 aa25.56■■□□□ 1.68
HMGA2-211ENST00000545998 SRGAP3O43295 1099 aa25.56■■□□□ 1.68
HMGA2-211ENST00000545998 SUPT20HQ8NEM7 779 aa25.56■■□□□ 1.68
HMGA2-211ENST00000545998 PUS3Q9BZE2 481 aaKnown RBP25.56■■□□□ 1.68
HMGA2-211ENST00000545998 RNF181Q9P0P0 153 aa25.56■■□□□ 1.68
HMGA2-211ENST00000545998 POLLQ9UGP5 575 aa25.56■■□□□ 1.68
HMGA2-211ENST00000545998 CNNM1Q9NRU3 951 aa25.55■■□□□ 1.68
HMGA2-211ENST00000545998 PNMA6EA0A0J9YXQ4 647 aa25.54■■□□□ 1.68
HMGA2-211ENST00000545998 IARSP41252 1262 aaKnown RBP25.54■■□□□ 1.68
HMGA2-211ENST00000545998 CHRNDQ07001 517 aa25.54■■□□□ 1.68
HMGA2-211ENST00000545998 TBC1D16Q8TBP0 767 aa25.54■■□□□ 1.68
HMGA2-211ENST00000545998 RIPOR2Q9Y4F9 1068 aa25.54■■□□□ 1.68
HMGA2-211ENST00000545998 ATP8B2P98198 1209 aa25.53■■□□□ 1.68
HMGA2-211ENST00000545998 LRRC24Q50LG9 513 aa25.53■■□□□ 1.68
HMGA2-211ENST00000545998 ANKRD2Q9GZV1 360 aa25.53■■□□□ 1.68
HMGA2-211ENST00000545998 VPS33BQ9H267 617 aa25.53■■□□□ 1.68
HMGA2-211ENST00000545998 TIAM2Q8IVF5 1701 aa25.53■■□□□ 1.68
HMGA2-211ENST00000545998 GGA1Q9UJY5 639 aa25.52■■□□□ 1.68
HMGA2-211ENST00000545998 CEP85Q6P2H3 762 aa25.52■■□□□ 1.68
HMGA2-211ENST00000545998 COPRSQ9NQ92 184 aa25.52■■□□□ 1.68
HMGA2-211ENST00000545998 COL4A5P29400 1685 aa25.51■■□□□ 1.67
HMGA2-211ENST00000545998 WTIPA6NIX2 430 aaPredicted RBP25.51■■□□□ 1.67
HMGA2-211ENST00000545998 C6orf229H3BNL8 230 aa25.51■■□□□ 1.67
HMGA2-211ENST00000545998 UFL1O94874 794 aa25.51■■□□□ 1.67
HMGA2-211ENST00000545998 ATP2B4P23634 1241 aa25.51■■□□□ 1.67
HMGA2-211ENST00000545998 POLA2Q14181 598 aa25.51■■□□□ 1.67
HMGA2-211ENST00000545998 PA2G4Q9UQ80 394 aaKnown RBP25.51■■□□□ 1.67
HMGA2-211ENST00000545998 EYA2O00167 538 aa25.5■■□□□ 1.67
HMGA2-211ENST00000545998 AOC3Q16853 763 aa25.5■■□□□ 1.67
HMGA2-211ENST00000545998 HELBQ8NG08 1087 aaPredicted RBP25.5■■□□□ 1.67
HMGA2-211ENST00000545998 SSH3Q8TE77 659 aa25.5■■□□□ 1.67
HMGA2-211ENST00000545998 CRBNQ96SW2 442 aa25.5■■□□□ 1.67
HMGA2-211ENST00000545998 FBXO3Q9UK99 471 aa25.5■■□□□ 1.67
HMGA2-211ENST00000545998 MROH5Q6ZUA9 1318 aa25.5■■□□□ 1.67
HMGA2-211ENST00000545998 PPIP5K2O43314 1243 aa25.49■■□□□ 1.67
HMGA2-211ENST00000545998 KIAA2012Q0VF49 1180 aa25.49■■□□□ 1.67
HMGA2-211ENST00000545998 ATG9AQ7Z3C6 839 aa25.49■■□□□ 1.67
HMGA2-211ENST00000545998 GPR101Q96P66 508 aaPredicted RBP25.49■■□□□ 1.67
HMGA2-211ENST00000545998 LEMD3Q9Y2U8 911 aa25.49■■□□□ 1.67
HMGA2-211ENST00000545998 TAF5LO75529 589 aa25.48■■□□□ 1.67
HMGA2-211ENST00000545998 CIAO1O76071 339 aa25.48■■□□□ 1.67
HMGA2-211ENST00000545998 WASHC4Q2M389 1173 aa25.48■■□□□ 1.67
HMGA2-211ENST00000545998 EYA3Q99504 573 aa25.48■■□□□ 1.67
HMGA2-211ENST00000545998 SIL1Q9H173 461 aa25.48■■□□□ 1.67
HMGA2-211ENST00000545998 LARGE2Q8N3Y3 721 aa25.48■■□□□ 1.67
HMGA2-211ENST00000545998 ZC3H4Q9UPT8 1303 aaKnown RBP25.47■■□□□ 1.67
HMGA2-211ENST00000545998 ZNF804BA4D1E1 1349 aa25.46■■□□□ 1.67
HMGA2-211ENST00000545998 METTL24Q5JXM2 366 aa25.46■■□□□ 1.67
HMGA2-211ENST00000545998 RPAP2Q8IXW5 612 aaPredicted RBP25.46■■□□□ 1.67
HMGA2-211ENST00000545998 VGLL2Q8N8G2 317 aa25.46■■□□□ 1.67
HMGA2-211ENST00000545998 SNAP23O00161 211 aa25.45■■□□□ 1.66
HMGA2-211ENST00000545998 RIMBP2O15034 1052 aa25.45■■□□□ 1.66
HMGA2-211ENST00000545998 MED23Q9ULK4 1368 aa25.45■■□□□ 1.66
HMGA2-211ENST00000545998 YY1P25490 414 aa25.44■■□□□ 1.66
HMGA2-211ENST00000545998 IL15P40933 162 aaPredicted RBP25.44■■□□□ 1.66
HMGA2-211ENST00000545998 KCNJ4P48050 445 aa25.44■■□□□ 1.66
HMGA2-211ENST00000545998 SIRT2Q8IXJ6 389 aa25.44■■□□□ 1.66
HMGA2-211ENST00000545998 JDP2Q8WYK2 163 aa25.44■■□□□ 1.66
HMGA2-211ENST00000545998 ZC3H12CQ9C0D7 883 aaKnown RBP25.44■■□□□ 1.66
HMGA2-211ENST00000545998 PDE8BO95263 885 aa25.44■■□□□ 1.66
HMGA2-211ENST00000545998 FZD9O00144 591 aa25.43■■□□□ 1.66
HMGA2-211ENST00000545998 NIM1KQ8IY84 436 aa25.43■■□□□ 1.66
HMGA2-211ENST00000545998 IRS2Q9Y4H2 1338 aa25.43■■□□□ 1.66
HMGA2-211ENST00000545998 KLRK1P26718 216 aa25.42■■□□□ 1.66
HMGA2-211ENST00000545998 UBE4AQ14139 1066 aa25.42■■□□□ 1.66
HMGA2-211ENST00000545998 TXNRD3Q86VQ6 643 aa25.41■■□□□ 1.66
HMGA2-211ENST00000545998 C15orf52Q6ZUT6 534 aaKnown RBP25.4■■□□□ 1.66
HMGA2-211ENST00000545998 ZNRF3Q9ULT6 936 aa25.4■■□□□ 1.66
HMGA2-211ENST00000545998 NOP58Q9Y2X3 529 aaKnown RBP25.4■■□□□ 1.66
HMGA2-211ENST00000545998 G3BP1Q13283 466 aaKnown RBP eCLIP25.39■■□□□ 1.66
HMGA2-211ENST00000545998 DOK7Q18PE1 504 aa25.39■■□□□ 1.66
HMGA2-211ENST00000545998 DBNDD1Q9H9R9 158 aa25.39■■□□□ 1.66
HMGA2-211ENST00000545998 CEP126Q9P2H0 1117 aa25.39■■□□□ 1.66
HMGA2-211ENST00000545998 HMMRO75330 724 aa25.39■■□□□ 1.65
HMGA2-211ENST00000545998 SURF6O75683 361 aaKnown RBP25.39■■□□□ 1.65
HMGA2-211ENST00000545998 FGFR2P21802 821 aa25.39■■□□□ 1.65
HMGA2-211ENST00000545998 PUM3Q15397 648 aaKnown RBP25.39■■□□□ 1.65
HMGA2-211ENST00000545998 SCN9AQ15858 1988 aa25.38■■□□□ 1.65
HMGA2-211ENST00000545998 ZNF541Q9H0D2 1346 aa25.38■■□□□ 1.65
HMGA2-211ENST00000545998 YDJCA8MPS7 323 aa25.38■■□□□ 1.65
HMGA2-211ENST00000545998 ECE2O60344 883 aa25.38■■□□□ 1.65
HMGA2-211ENST00000545998 EXOC6Q8TAG9 804 aa25.37■■□□□ 1.65
HMGA2-211ENST00000545998 PCDHB15Q9Y5E8 787 aa25.37■■□□□ 1.65
HMGA2-211ENST00000545998 TFCP2Q12800 502 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms