RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 GPR162Q16538 588 aa10.48□□□□□ -0.73
MTHFD1-202ENST00000545908 BABAM1Q9NWV8 329 aa10.48□□□□□ -0.73
MTHFD1-202ENST00000545908 PLEKHG3A1L390 1219 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 A1BGP04217 495 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 HEATR3Q7Z4Q2 680 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 FLAD1Q8NFF5 587 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 PICK1Q9NRD5 415 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 POTEJP0CG39 1038 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 LARGE2Q8N3Y3 721 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 SPC24Q8NBT2 197 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 HSP90AA2PQ14568 343 aaPredicted RBP10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 LIMCH1Q9UPQ0 1083 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 NOM1Q5C9Z4 860 aaKnown RBP10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 TBC1D9Q6ZT07 1266 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 TRMT1LQ7Z2T5 733 aaKnown RBP10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 CCDC24Q8N4L8 307 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 MCM9Q9NXL9 1143 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 IQGAP3Q86VI3 1631 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 ZNF771Q7L3S4 317 aaPredicted RBP10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 SMTNL1A8MU46 457 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 NIM1KQ8IY84 436 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 CCDC191Q8NCU4 936 aa10.47□□□□□ -0.73
MTHFD1-202ENST00000545908 TRIM37O94972 964 aa10.46□□□□□ -0.73
MTHFD1-202ENST00000545908 HIBADHP31937 336 aaKnown RBP10.46□□□□□ -0.73
MTHFD1-202ENST00000545908 TRAF1Q13077 416 aa10.46□□□□□ -0.73
MTHFD1-202ENST00000545908 PUM3Q15397 648 aaKnown RBP10.46□□□□□ -0.73
MTHFD1-202ENST00000545908 CDC42BPBQ9Y5S2 1711 aa10.46□□□□□ -0.73
MTHFD1-202ENST00000545908 RNF113AO15541 343 aaKnown RBP10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 CA8P35219 290 aa10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 ANKRD44Q8N8A2 993 aa10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 MYOM2P54296 1465 aa10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 CAMSAP1Q5T5Y3 1602 aa10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 SYNMO15061 1565 aa10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 RTL9Q8NET4 1388 aa10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 EAPPQ56P03 285 aaPredicted RBP10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 DNAJC10Q8IXB1 793 aa10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 CKAP2LQ8IYA6 745 aa10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 DNAJC5Q9H3Z4 198 aa10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 TMOD4Q9NZQ9 345 aa10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 BCCIPQ9P287 314 aaKnown RBP eCLIP10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 SH3TC1Q8TE82 1336 aa10.46□□□□□ -0.74
MTHFD1-202ENST00000545908 VAMP4O75379 141 aa10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 GJB2P29033 226 aa10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 FERMT3Q86UX7 667 aa10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 MAST3O60307 1309 aa10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 NMIQ13287 307 aaPredicted RBP10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 RTN1Q16799 776 aa10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 DRC1Q96MC2 740 aa10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 ZNF397Q8NF99 534 aaPredicted RBP10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 PHKG2P15735 406 aa10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 CAMK4Q16566 473 aa10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 TMTC2Q8N394 836 aa10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 KIAA0232Q92628 1395 aa10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 EIF5P55010 431 aaKnown RBP10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 MAPK8IP2Q13387 824 aaPredicted RBP10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 ATP7BP35670 1465 aa10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 CLASP1Q7Z460 1538 aa10.45□□□□□ -0.74
MTHFD1-202ENST00000545908 SMARCC2Q8TAQ2 1214 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 BCS1LQ9Y276 419 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 B4DLN1 442 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 MRPL12P52815 198 aaKnown RBP10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 HDAC1Q13547 482 aaPredicted RBP10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 KRT27Q7Z3Y8 459 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 RRP36Q96EU6 259 aaKnown RBP10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 TCP11L1Q9NUJ3 509 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 KLF18A0A0U1RQI7 1052 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 ZBTB43O43298 467 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 FGFR1OPO95684 399 aaKnown RBP10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 IGHDP01880 384 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 BIN2Q9UBW5 565 aaPredicted RBP10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 PTPRTO14522 1441 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 SSR1P43307 286 aaKnown RBP10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 FAM196AQ6ZSG2 479 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 TEX11Q8IYF3 940 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 AMPD3Q01432 767 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 BICD1Q96G01 975 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 ABCA9Q8IUA7 1624 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 RAB3GAP1Q15042 981 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 CEP85Q6P2H3 762 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 ARHGAP27Q6ZUM4 889 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 C2CD5Q86YS7 1000 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 TTC41PQ6P2S7 1318 aa10.44□□□□□ -0.74
MTHFD1-202ENST00000545908 GNAQP50148 359 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 CDR1P51861 262 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 NAPAP54920 295 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 SYCP3Q8IZU3 236 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 ORC3Q9UBD5 711 aaPredicted RBP10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 CLTCL1P53675 1640 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 STXBP4Q6ZWJ1 553 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 ROBO2Q9HCK4 1378 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 SDSP20132 328 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 CCDC148Q8NFR7 591 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 PPIP5K2O43314 1243 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 CALM1P0DP23 149 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 CALM2P0DP24 149 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 CALM3P0DP25 149 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 MRE11P49959 708 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 PDE1AP54750 535 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 BMP2KLQ5H9B9 411 aa10.43□□□□□ -0.74
MTHFD1-202ENST00000545908 FKBP15Q5T1M5 1219 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms