RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 COL13A1Q5TAT6 717 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-224ENST00000545688 EDEM1Q92611 657 aa9.56□□□□□ -0.88
SNHG1-224ENST00000545688 C9orf172C9J069 976 aa9.55□□□□□ -0.88
SNHG1-224ENST00000545688 NOM1Q5C9Z4 860 aaKnown RBP9.55□□□□□ -0.88
SNHG1-224ENST00000545688 TTC39BQ5VTQ0 682 aaPredicted RBP9.55□□□□□ -0.88
SNHG1-224ENST00000545688 GDF6Q6KF10 455 aaPredicted RBP9.55□□□□□ -0.88
SNHG1-224ENST00000545688 ARID3AQ99856 593 aa9.55□□□□□ -0.88
SNHG1-224ENST00000545688 RBSNQ9H1K0 784 aa9.55□□□□□ -0.88
SNHG1-224ENST00000545688 ABI2Q9NYB9 513 aaPredicted RBP9.55□□□□□ -0.88
SNHG1-224ENST00000545688 SUPT5HO00267 1087 aaKnown RBP9.54□□□□□ -0.88
SNHG1-224ENST00000545688 EIF1AXP47813 144 aaKnown RBP9.54□□□□□ -0.88
SNHG1-224ENST00000545688 DNM1Q05193 864 aaKnown RBP9.54□□□□□ -0.88
SNHG1-224ENST00000545688 HYAL2Q12891 473 aa9.54□□□□□ -0.88
SNHG1-224ENST00000545688 ADGRE1Q14246 886 aa9.54□□□□□ -0.88
SNHG1-224ENST00000545688 MBTPS1Q14703 1052 aa9.54□□□□□ -0.88
SNHG1-224ENST00000545688 DTWD1Q8N5C7 304 aa9.54□□□□□ -0.88
SNHG1-224ENST00000545688 LENG1Q96BZ8 264 aaPredicted RBP9.54□□□□□ -0.88
SNHG1-224ENST00000545688 ELP3Q9H9T3 547 aa9.54□□□□□ -0.88
SNHG1-224ENST00000545688 TMEM63CQ9P1W3 806 aa9.54□□□□□ -0.88
SNHG1-224ENST00000545688 LOC100996750A0A140TA64 210 aa9.53□□□□□ -0.88
SNHG1-224ENST00000545688 CYP2E1P05181 493 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-224ENST00000545688 PDE12Q6L8Q7 609 aaKnown RBP9.53□□□□□ -0.88
SNHG1-224ENST00000545688 FBXO11Q86XK2 927 aa9.53□□□□□ -0.88
SNHG1-224ENST00000545688 KRTAP4-6Q9BYQ5 205 aa9.53□□□□□ -0.88
SNHG1-224ENST00000545688 TPSG1Q9NRR2 321 aa9.53□□□□□ -0.88
SNHG1-224ENST00000545688 TRIM33Q9UPN9 1127 aa9.53□□□□□ -0.88
SNHG1-224ENST00000545688 DEAF1O75398 565 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-224ENST00000545688 PDGFAP04085 211 aa9.52□□□□□ -0.89
SNHG1-224ENST00000545688 ATP11AP98196 1134 aa9.52□□□□□ -0.89
SNHG1-224ENST00000545688 ZNF438Q7Z4V0 828 aa9.52□□□□□ -0.89
SNHG1-224ENST00000545688 IL22RA1Q8N6P7 574 aa9.52□□□□□ -0.89
SNHG1-224ENST00000545688 GGNBP2Q9H3C7 697 aa9.52□□□□□ -0.89
SNHG1-224ENST00000545688 A6NHS1 94 aa9.51□□□□□ -0.89
SNHG1-224ENST00000545688 NRG1Q02297 640 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-224ENST00000545688 ERICH6Q7L0X2 663 aa9.51□□□□□ -0.89
SNHG1-224ENST00000545688 USP21Q9UK80 565 aa9.51□□□□□ -0.89
SNHG1-224ENST00000545688 USTQ9Y2C2 406 aa9.51□□□□□ -0.89
SNHG1-224ENST00000545688 KIF4AO95239 1232 aa9.5□□□□□ -0.89
SNHG1-224ENST00000545688 RPLP1P05386 114 aaKnown RBP9.5□□□□□ -0.89
SNHG1-224ENST00000545688 MZF1P28698 734 aaPredicted RBP9.5□□□□□ -0.89
SNHG1-224ENST00000545688 RSPO4Q2I0M5 234 aaPredicted RBP9.5□□□□□ -0.89
SNHG1-224ENST00000545688 SPACA7Q96KW9 195 aa9.5□□□□□ -0.89
SNHG1-224ENST00000545688 CNTN3Q9P232 1028 aa9.5□□□□□ -0.89
SNHG1-224ENST00000545688 KANSL3Q9P2N6 904 aa9.5□□□□□ -0.89
SNHG1-224ENST00000545688 MTMR7Q9Y216 660 aa9.5□□□□□ -0.89
SNHG1-224ENST00000545688 ABL1P00519 1130 aa9.49□□□□□ -0.89
SNHG1-224ENST00000545688 PCSK2P16519 638 aa9.49□□□□□ -0.89
SNHG1-224ENST00000545688 NPR3P17342 541 aa9.49□□□□□ -0.89
SNHG1-224ENST00000545688 ZNF211Q13398 564 aaPredicted RBP9.49□□□□□ -0.89
SNHG1-224ENST00000545688 C8orf34Q49A92 452 aa9.49□□□□□ -0.89
SNHG1-224ENST00000545688 ALKBH2Q6NS38 261 aa9.49□□□□□ -0.89
SNHG1-224ENST00000545688 TXNRD3Q86VQ6 643 aa9.49□□□□□ -0.89
SNHG1-224ENST00000545688 RASSF4Q9H2L5 321 aa9.49□□□□□ -0.89
SNHG1-224ENST00000545688 SEMA6BQ9H3T3 888 aa9.49□□□□□ -0.89
SNHG1-224ENST00000545688 ANO2Q9NQ90 1003 aa9.49□□□□□ -0.89
SNHG1-224ENST00000545688 POLIQ9UNA4 740 aa9.49□□□□□ -0.89
SNHG1-224ENST00000545688 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.49□□□□□ -0.89
SNHG1-224ENST00000545688 ITGB7P26010 798 aa9.48□□□□□ -0.89
SNHG1-224ENST00000545688 NKAPLQ5M9Q1 402 aa9.48□□□□□ -0.89
SNHG1-224ENST00000545688 CEP135Q66GS9 1140 aa9.48□□□□□ -0.89
SNHG1-224ENST00000545688 XKR5Q6UX68 686 aa9.48□□□□□ -0.89
SNHG1-224ENST00000545688 TIMELESSQ9UNS1 1208 aa9.48□□□□□ -0.89
SNHG1-224ENST00000545688 DLL1O00548 723 aa9.47□□□□□ -0.89
SNHG1-224ENST00000545688 FAM13AO94988 1023 aa9.47□□□□□ -0.89
SNHG1-224ENST00000545688 FKBP4Q02790 459 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNHG1-224ENST00000545688 SF3B2Q13435 895 aaKnown RBP9.47□□□□□ -0.89
SNHG1-224ENST00000545688 AAMPQ13685 434 aa9.47□□□□□ -0.89
SNHG1-224ENST00000545688 ADAMTSL4Q6UY14 1074 aa9.47□□□□□ -0.89
SNHG1-224ENST00000545688 NCAPG2Q86XI2 1143 aa9.47□□□□□ -0.89
SNHG1-224ENST00000545688 CEP120Q8N960 986 aa9.47□□□□□ -0.89
SNHG1-224ENST00000545688 C1orf127Q8N9H9 656 aa9.47□□□□□ -0.89
SNHG1-224ENST00000545688 SMNDC1O75940 238 aaKnown RBP eCLIP9.46□□□□□ -0.93e-14■■■■■ 31.4
SNHG1-224ENST00000545688 SETDB1Q15047 1291 aa9.46□□□□□ -0.9
SNHG1-224ENST00000545688 IGF2-ASQ6U949 168 aa9.46□□□□□ -0.9
SNHG1-224ENST00000545688 TTC16Q8NEE8 873 aa9.46□□□□□ -0.9
SNHG1-224ENST00000545688 LACRTQ9GZZ8 138 aa9.46□□□□□ -0.9
SNHG1-224ENST00000545688 FZD6O60353 706 aa9.45□□□□□ -0.9
SNHG1-224ENST00000545688 CACTIN-AS1Q8N1I8 211 aa9.45□□□□□ -0.9
SNHG1-224ENST00000545688 PBX4Q9BYU1 374 aa9.45□□□□□ -0.9
SNHG1-224ENST00000545688 DYRK3O43781 588 aa9.44□□□□□ -0.9
SNHG1-224ENST00000545688 ACPPP15309 386 aa9.44□□□□□ -0.9
SNHG1-224ENST00000545688 CES1P23141 567 aa9.44□□□□□ -0.9
SNHG1-224ENST00000545688 B4GALNT3Q6L9W6 998 aa9.44□□□□□ -0.9
SNHG1-224ENST00000545688 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
SNHG1-224ENST00000545688 CHRDQ9H2X0 955 aa9.44□□□□□ -0.9
SNHG1-224ENST00000545688 SALL4Q9UJQ4 1053 aa9.44□□□□□ -0.9
SNHG1-224ENST00000545688 PPME1Q9Y570 386 aa9.44□□□□□ -0.9
SNHG1-224ENST00000545688 LINC01387J3KSC0 135 aa9.43□□□□□ -0.9
SNHG1-224ENST00000545688 NOS3P29474 1203 aa9.43□□□□□ -0.9
SNHG1-224ENST00000545688 IREB2P48200 963 aaKnown RBP9.43□□□□□ -0.9
SNHG1-224ENST00000545688 TXNDC11Q6PKC3 985 aa9.43□□□□□ -0.9
SNHG1-224ENST00000545688 RETREG2Q8NC44 543 aa9.43□□□□□ -0.9
SNHG1-224ENST00000545688 SSBP4Q9BWG4 385 aaPredicted RBP9.43□□□□□ -0.9
SNHG1-224ENST00000545688 MUC3BQ9H195 1237 aa9.43□□□□□ -0.9
SNHG1-224ENST00000545688 SRA1Q9HD15 236 aaKnown RBP9.43□□□□□ -0.9
SNHG1-224ENST00000545688 CCDC87Q9NVE4 849 aa9.43□□□□□ -0.9
SNHG1-224ENST00000545688 CDC27P30260 824 aa9.42□□□□□ -0.9
SNHG1-224ENST00000545688 SERPINB4P48594 390 aa9.42□□□□□ -0.9
SNHG1-224ENST00000545688 MAP4K3Q8IVH8 894 aa9.42□□□□□ -0.9
SNHG1-224ENST00000545688 CDC25BP30305 580 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms