RNA–Protein interactions for RNA: ENST00000545467.5

LDHA-224, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-224ENST00000545467 PHACTR3Q96KR7 559 aa9.94□□□□□ -0.82
LDHA-224ENST00000545467 UPF2Q9HAU5 1272 aaKnown RBP9.94□□□□□ -0.82
LDHA-224ENST00000545467 GBA2Q9HCG7 927 aaPredicted RBP9.94□□□□□ -0.82
LDHA-224ENST00000545467 NOB1Q9ULX3 412 aaKnown RBP9.94□□□□□ -0.82
LDHA-224ENST00000545467 TNNQ9UQP3 1299 aa9.94□□□□□ -0.82
LDHA-224ENST00000545467 RNMTO43148 476 aaKnown RBP9.93□□□□□ -0.82
LDHA-224ENST00000545467 VAMP4O75379 141 aa9.93□□□□□ -0.82
LDHA-224ENST00000545467 GMPSP49915 693 aaPredicted RBP9.93□□□□□ -0.82
LDHA-224ENST00000545467 TWISTNBQ3B726 338 aaPredicted RBP9.93□□□□□ -0.82
LDHA-224ENST00000545467 NOM1Q5C9Z4 860 aaKnown RBP9.93□□□□□ -0.82
LDHA-224ENST00000545467 INTS3Q68E01 1043 aaKnown RBP9.93□□□□□ -0.82
LDHA-224ENST00000545467 SKAP1Q86WV1 359 aa9.93□□□□□ -0.82
LDHA-224ENST00000545467 AEBP1Q8IUX7 1158 aa9.93□□□□□ -0.82
LDHA-224ENST00000545467 SMC5Q8IY18 1101 aa9.93□□□□□ -0.82
LDHA-224ENST00000545467 TMEM57Q8N5G2 664 aa9.93□□□□□ -0.82
LDHA-224ENST00000545467 MRPL50Q8N5N7 158 aaKnown RBP9.93□□□□□ -0.82
LDHA-224ENST00000545467 GAS2L2Q8NHY3 880 aa9.93□□□□□ -0.82
LDHA-224ENST00000545467 ZNF296Q8WUU4 475 aaPredicted RBP9.93□□□□□ -0.82
LDHA-224ENST00000545467 VPS33BQ9H267 617 aa9.93□□□□□ -0.82
LDHA-224ENST00000545467 MBIPQ9NS73 344 aa9.93□□□□□ -0.82
LDHA-224ENST00000545467 DAXXQ9UER7 740 aaPredicted RBP9.93□□□□□ -0.82
LDHA-224ENST00000545467 MRC1P22897 1456 aa9.92□□□□□ -0.82
LDHA-224ENST00000545467 CXCL9Q07325 125 aa9.92□□□□□ -0.82
LDHA-224ENST00000545467 SULT6B1Q6IMI4 303 aa9.92□□□□□ -0.82
LDHA-224ENST00000545467 ZBTB40Q9NUA8 1239 aa9.92□□□□□ -0.82
LDHA-224ENST00000545467 ZNRF3Q9ULT6 936 aa9.92□□□□□ -0.82
LDHA-224ENST00000545467 LAS1LQ9Y4W2 734 aaKnown RBP9.92□□□□□ -0.82
LDHA-224ENST00000545467 PPIP5K2O43314 1243 aa9.91□□□□□ -0.82
LDHA-224ENST00000545467 HTATSF1O43719 755 aaKnown RBP9.91□□□□□ -0.82
LDHA-224ENST00000545467 CRY2Q49AN0 593 aa9.91□□□□□ -0.82
LDHA-224ENST00000545467 DZIP3Q86Y13 1208 aaKnown RBP9.91□□□□□ -0.82
LDHA-224ENST00000545467 TTC5Q8N0Z6 440 aa9.91□□□□□ -0.82
LDHA-224ENST00000545467 TRPM4Q8TD43 1214 aa9.91□□□□□ -0.82
LDHA-224ENST00000545467 ZNF652Q9Y2D9 606 aa9.91□□□□□ -0.82
LDHA-224ENST00000545467 PTPRCP08575 1304 aa9.9□□□□□ -0.82
LDHA-224ENST00000545467 POTEFA5A3E0 1075 aa9.9□□□□□ -0.82
LDHA-224ENST00000545467 H7C1D1 291 aa9.9□□□□□ -0.82
LDHA-224ENST00000545467 RGL2O15211 777 aa9.9□□□□□ -0.82
LDHA-224ENST00000545467 EIF5BO60841 1220 aaKnown RBP9.9□□□□□ -0.82
LDHA-224ENST00000545467 MNX1P50219 401 aaPredicted RBP9.9□□□□□ -0.82
LDHA-224ENST00000545467 KRT26Q7Z3Y9 468 aa9.9□□□□□ -0.82
LDHA-224ENST00000545467 PITPNM2Q9BZ72 1349 aa9.89□□□□□ -0.83
LDHA-224ENST00000545467 SIPA1L3O60292 1781 aaPredicted RBP9.89□□□□□ -0.83
LDHA-224ENST00000545467 GPR25O00155 361 aa9.89□□□□□ -0.83
LDHA-224ENST00000545467 CHL1O00533 1208 aa9.89□□□□□ -0.83
LDHA-224ENST00000545467 TBC1D8O95759 1140 aa9.89□□□□□ -0.83
LDHA-224ENST00000545467 A1BGP04217 495 aa9.89□□□□□ -0.83
LDHA-224ENST00000545467 HOXA10P31260 410 aaPredicted RBP9.89□□□□□ -0.83
LDHA-224ENST00000545467 BECN1Q14457 450 aa9.89□□□□□ -0.83
LDHA-224ENST00000545467 TNIP1Q15025 636 aa9.89□□□□□ -0.83
LDHA-224ENST00000545467 ZNF496Q96IT1 587 aaPredicted RBP9.89□□□□□ -0.83
LDHA-224ENST00000545467 THUMPD2Q9BTF0 503 aaKnown RBP9.89□□□□□ -0.83
LDHA-224ENST00000545467 CNOT7Q9UIV1 285 aaKnown RBP9.89□□□□□ -0.83
LDHA-224ENST00000545467 NIP7Q9Y221 180 aaKnown RBP eCLIP9.89□□□□□ -0.83
LDHA-224ENST00000545467 HEG1Q9ULI3 1381 aa9.88□□□□□ -0.83
LDHA-224ENST00000545467 POLR2AP24928 1970 aaKnown RBP9.88□□□□□ -0.83
LDHA-224ENST00000545467 GTF2E1P29083 439 aaPredicted RBP9.88□□□□□ -0.83
LDHA-224ENST00000545467 AOC3Q16853 763 aa9.88□□□□□ -0.83
LDHA-224ENST00000545467 DLK2Q6UY11 383 aa9.88□□□□□ -0.83
LDHA-224ENST00000545467 RTF1Q92541 710 aaKnown RBP9.88□□□□□ -0.83
LDHA-224ENST00000545467 OTUD5Q96G74 571 aa9.88□□□□□ -0.83
LDHA-224ENST00000545467 FOXD4L1Q9NU39 408 aa9.88□□□□□ -0.83
LDHA-224ENST00000545467 BABAM1Q9NWV8 329 aa9.88□□□□□ -0.83
LDHA-224ENST00000545467 COL6A3P12111 3177 aa9.88□□□□□ -0.83
LDHA-224ENST00000545467 UBR2Q8IWV8 1755 aa9.88□□□□□ -0.83
LDHA-224ENST00000545467 FKTNO75072 461 aa9.87□□□□□ -0.83
LDHA-224ENST00000545467 NUCB1Q02818 461 aa9.87□□□□□ -0.83
LDHA-224ENST00000545467 ZNF790Q6PG37 636 aa9.87□□□□□ -0.83
LDHA-224ENST00000545467 RASAL3Q86YV0 1011 aa9.87□□□□□ -0.83
LDHA-224ENST00000545467 TSPYL6Q8N831 410 aa9.87□□□□□ -0.83
LDHA-224ENST00000545467 SUPT20HQ8NEM7 779 aa9.87□□□□□ -0.83
LDHA-224ENST00000545467 TMX4Q9H1E5 349 aaPredicted RBP9.87□□□□□ -0.83
LDHA-224ENST00000545467 ZBTB7BO15156 539 aaPredicted RBP9.86□□□□□ -0.83
LDHA-224ENST00000545467 MICALL2Q8IY33 904 aa9.86□□□□□ -0.83
LDHA-224ENST00000545467 C8orf58Q8NAV2 365 aa9.86□□□□□ -0.83
LDHA-224ENST00000545467 RPGRQ92834 1020 aaKnown RBP9.86□□□□□ -0.83
LDHA-224ENST00000545467 DCPSQ96C86 337 aaKnown RBP9.86□□□□□ -0.83
LDHA-224ENST00000545467 TBC1D32Q96NH3 1257 aa9.86□□□□□ -0.83
LDHA-224ENST00000545467 CRAMP1Q96RY5 1269 aa9.86□□□□□ -0.83
LDHA-224ENST00000545467 FAM177BA6PVY3 158 aa9.85□□□□□ -0.83
LDHA-224ENST00000545467 PPEF1O14829 653 aaPredicted RBP9.85□□□□□ -0.83
LDHA-224ENST00000545467 RAD17O75943 681 aa9.85□□□□□ -0.83
LDHA-224ENST00000545467 EN2P19622 333 aaPredicted RBP9.85□□□□□ -0.83
LDHA-224ENST00000545467 TM4SF4P48230 202 aa9.85□□□□□ -0.83
LDHA-224ENST00000545467 FKBP1BP68106 108 aa9.85□□□□□ -0.83
LDHA-224ENST00000545467 DPF2Q92785 391 aa9.85□□□□□ -0.83
LDHA-224ENST00000545467 RBM17Q96I25 401 aaKnown RBP9.85□□□□□ -0.83
LDHA-224ENST00000545467 FMNL2Q96PY5 1086 aa9.85□□□□□ -0.83
LDHA-224ENST00000545467 CFHR5Q9BXR6 569 aa9.85□□□□□ -0.83
LDHA-224ENST00000545467 RTFDC1Q9BY42 306 aaPredicted RBP9.85□□□□□ -0.83
LDHA-224ENST00000545467 CHMP4AQ9BY43 222 aa9.85□□□□□ -0.83
LDHA-224ENST00000545467 NYXQ9GZU5 481 aa9.85□□□□□ -0.83
LDHA-224ENST00000545467 HTTP42858 3142 aa9.84□□□□□ -0.83
LDHA-224ENST00000545467 SHTN1A0MZ66 631 aa9.84□□□□□ -0.83
LDHA-224ENST00000545467 ADM5C9JUS6 153 aa9.84□□□□□ -0.83
LDHA-224ENST00000545467 H0YGN5 161 aa9.84□□□□□ -0.83
LDHA-224ENST00000545467 EVX2Q03828 476 aa9.84□□□□□ -0.83
LDHA-224ENST00000545467 BMP2KLQ5H9B9 411 aa9.84□□□□□ -0.83
LDHA-224ENST00000545467 SAMD7Q7Z3H4 446 aa9.84□□□□□ -0.83
LDHA-224ENST00000545467 CHD1LQ86WJ1 897 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms