RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 TCHHQ07283 1943 aa22.37■■□□□ 1.17
MSLN-202ENST00000545450 ATP6V1AP38606 617 aa22.37■■□□□ 1.17
MSLN-202ENST00000545450 FOXO4P98177 505 aa22.37■■□□□ 1.17
MSLN-202ENST00000545450 HLFQ16534 295 aa22.37■■□□□ 1.17
MSLN-202ENST00000545450 G3BP1Q13283 466 aaKnown RBP eCLIP22.36■■□□□ 1.17
MSLN-202ENST00000545450 SMC3Q9UQE7 1217 aa22.36■■□□□ 1.17
MSLN-202ENST00000545450 COL5A3P25940 1745 aaPredicted RBP22.36■■□□□ 1.17
MSLN-202ENST00000545450 ITPK1Q13572 414 aa22.36■■□□□ 1.17
MSLN-202ENST00000545450 GIGYF2Q6Y7W6 1299 aaKnown RBP22.36■■□□□ 1.17
MSLN-202ENST00000545450 C17orf53Q8N3J3 647 aaPredicted RBP22.36■■□□□ 1.17
MSLN-202ENST00000545450 MAP4K4O95819 1239 aaPredicted RBP22.35■■□□□ 1.17
MSLN-202ENST00000545450 IL6STP40189 918 aaPredicted RBP22.35■■□□□ 1.17
MSLN-202ENST00000545450 PTPN12Q05209 780 aaKnown RBP22.35■■□□□ 1.17
MSLN-202ENST00000545450 LMBR1LQ6UX01 489 aa22.35■■□□□ 1.17
MSLN-202ENST00000545450 CLASRPQ8N2M8 674 aaKnown RBP22.35■■□□□ 1.17
MSLN-202ENST00000545450 COPRSQ9NQ92 184 aa22.35■■□□□ 1.17
MSLN-202ENST00000545450 AFF2P51816 1311 aa22.35■■□□□ 1.17
MSLN-202ENST00000545450 TRIM28Q13263 835 aaKnown RBP22.35■■□□□ 1.17
MSLN-202ENST00000545450 INTS5Q6P9B9 1019 aaKnown RBP22.35■■□□□ 1.17
MSLN-202ENST00000545450 ARID3AQ99856 593 aa22.35■■□□□ 1.17
MSLN-202ENST00000545450 FIBPO43427 364 aa22.34■■□□□ 1.17
MSLN-202ENST00000545450 CNTROBQ8N137 903 aa22.34■■□□□ 1.17
MSLN-202ENST00000545450 USP42Q9H9J4 1324 aaKnown RBP22.34■■□□□ 1.17
MSLN-202ENST00000545450 CRKLP46109 303 aaKnown RBP22.33■■□□□ 1.17
MSLN-202ENST00000545450 GIMAP6Q6P9H5 292 aa22.33■■□□□ 1.17
MSLN-202ENST00000545450 TSC1Q92574 1164 aa22.33■■□□□ 1.17
MSLN-202ENST00000545450 ZNF831Q5JPB2 1677 aa22.33■■□□□ 1.17
MSLN-202ENST00000545450 LARP6Q9BRS8 491 aaKnown RBP22.33■■□□□ 1.16
MSLN-202ENST00000545450 CCDC87Q9NVE4 849 aa22.33■■□□□ 1.16
MSLN-202ENST00000545450 KIF3AQ9Y496 699 aa22.33■■□□□ 1.16
MSLN-202ENST00000545450 BTAF1O14981 1849 aa22.33■■□□□ 1.16
MSLN-202ENST00000545450 AP5Z1O43299 807 aa22.32■■□□□ 1.16
MSLN-202ENST00000545450 PTF1AQ7RTS3 328 aa22.32■■□□□ 1.16
MSLN-202ENST00000545450 KIAA1524Q8TCG1 905 aa22.32■■□□□ 1.16
MSLN-202ENST00000545450 GJD4Q96KN9 370 aaPredicted RBP22.32■■□□□ 1.16
MSLN-202ENST00000545450 TPM3P06753 285 aa22.32■■□□□ 1.16
MSLN-202ENST00000545450 EIF5P55010 431 aaKnown RBP22.32■■□□□ 1.16
MSLN-202ENST00000545450 DZIP3Q86Y13 1208 aaKnown RBP22.32■■□□□ 1.16
MSLN-202ENST00000545450 SMARCC1Q92922 1105 aaPredicted RBP22.32■■□□□ 1.16
MSLN-202ENST00000545450 TBC1D2BQ9UPU7 963 aa22.32■■□□□ 1.16
MSLN-202ENST00000545450 MTMR6Q9Y217 621 aa22.32■■□□□ 1.16
MSLN-202ENST00000545450 AACSQ86V21 672 aa22.31■■□□□ 1.16
MSLN-202ENST00000545450 EAF2Q96CJ1 260 aaPredicted RBP22.31■■□□□ 1.16
MSLN-202ENST00000545450 NHSQ6T4R5 1651 aa22.31■■□□□ 1.16
MSLN-202ENST00000545450 LARGE1O95461 756 aa22.31■■□□□ 1.16
MSLN-202ENST00000545450 GPTP24298 496 aa22.31■■□□□ 1.16
MSLN-202ENST00000545450 DNM1Q05193 864 aaKnown RBP22.31■■□□□ 1.16
MSLN-202ENST00000545450 CHMP3Q9Y3E7 222 aa22.31■■□□□ 1.16
MSLN-202ENST00000545450 TTC41PQ6P2S7 1318 aa22.3■■□□□ 1.16
MSLN-202ENST00000545450 ATRNO75882 1429 aa22.3■■□□□ 1.16
MSLN-202ENST00000545450 FAM182BQ5T319 152 aa22.3■■□□□ 1.16
MSLN-202ENST00000545450 KCNF1Q9H3M0 494 aa22.3■■□□□ 1.16
MSLN-202ENST00000545450 PCCAP05165 728 aaPredicted RBP22.29■■□□□ 1.16
MSLN-202ENST00000545450 IFIT2P09913 472 aaKnown RBP22.29■■□□□ 1.16
MSLN-202ENST00000545450 CASTP20810 708 aaKnown RBP22.29■■□□□ 1.16
MSLN-202ENST00000545450 GJB2P29033 226 aa22.29■■□□□ 1.16
MSLN-202ENST00000545450 TPRNQ4KMQ1 711 aa22.29■■□□□ 1.16
MSLN-202ENST00000545450 VPS53Q5VIR6 699 aa22.29■■□□□ 1.16
MSLN-202ENST00000545450 CWC27Q6UX04 472 aaKnown RBP22.29■■□□□ 1.16
MSLN-202ENST00000545450 FAM89AQ96GI7 184 aa22.29■■□□□ 1.16
MSLN-202ENST00000545450 SBF2Q86WG5 1849 aa22.29■■□□□ 1.16
MSLN-202ENST00000545450 ERVV-1B6SEH8 477 aa22.29■■□□□ 1.16
MSLN-202ENST00000545450 NLRP10Q86W26 655 aa22.29■■□□□ 1.16
MSLN-202ENST00000545450 ZSCAN31Q96LW9 406 aaPredicted RBP22.29■■□□□ 1.16
MSLN-202ENST00000545450 MYH3P11055 1940 aa22.29■■□□□ 1.16
MSLN-202ENST00000545450 HSP90AB3PQ58FF7 597 aa22.28■■□□□ 1.16
MSLN-202ENST00000545450 ZBTB38Q8NAP3 1195 aaPredicted RBP22.28■■□□□ 1.16
MSLN-202ENST00000545450 KCNB2Q92953 911 aa22.28■■□□□ 1.16
MSLN-202ENST00000545450 TM6SF1Q9BZW5 370 aa22.28■■□□□ 1.16
MSLN-202ENST00000545450 SH2B1Q9NRF2 756 aaPredicted RBP22.28■■□□□ 1.16
MSLN-202ENST00000545450 TLR7Q9NYK1 1049 aaKnown RBP22.28■■□□□ 1.16
MSLN-202ENST00000545450 CPA1P15085 419 aa22.28■■□□□ 1.16
MSLN-202ENST00000545450 UTP14CQ5TAP6 766 aaKnown RBP22.28■■□□□ 1.16
MSLN-202ENST00000545450 CCDC83Q8IWF9 413 aa22.28■■□□□ 1.16
MSLN-202ENST00000545450 CCDC8Q9H0W5 538 aaPredicted RBP22.28■■□□□ 1.16
MSLN-202ENST00000545450 SYNE4Q8N205 404 aa22.27■■□□□ 1.16
MSLN-202ENST00000545450 ZSWIM6Q9HCJ5 1215 aa22.27■■□□□ 1.16
MSLN-202ENST00000545450 ECHDC1Q9NTX5 307 aa22.27■■□□□ 1.16
MSLN-202ENST00000545450 PYCARDQ9ULZ3 195 aa22.27■■□□□ 1.16
MSLN-202ENST00000545450 CCDC192P0DO97 292 aa22.26■■□□□ 1.15
MSLN-202ENST00000545450 PLCB2Q00722 1185 aa22.26■■□□□ 1.15
MSLN-202ENST00000545450 BCL2L12Q9HB09 334 aa22.26■■□□□ 1.15
MSLN-202ENST00000545450 DIAPH3Q9NSV4 1193 aa22.26■■□□□ 1.15
MSLN-202ENST00000545450 PDRG1Q9NUG6 133 aa22.26■■□□□ 1.15
MSLN-202ENST00000545450 GLRX3O76003 335 aaKnown RBP22.26■■□□□ 1.15
MSLN-202ENST00000545450 ZSCAN20P17040 1043 aaPredicted RBP22.26■■□□□ 1.15
MSLN-202ENST00000545450 TFCP2Q12800 502 aa22.26■■□□□ 1.15
MSLN-202ENST00000545450 UBN2Q6ZU65 1347 aa22.25■■□□□ 1.15
MSLN-202ENST00000545450 KCNQ4P56696 695 aa22.25■■□□□ 1.15
MSLN-202ENST00000545450 DMTNQ08495 405 aa22.25■■□□□ 1.15
MSLN-202ENST00000545450 RUFY2Q8WXA3 655 aa22.25■■□□□ 1.15
MSLN-202ENST00000545450 TRPC5Q9UL62 973 aaPredicted RBP22.25■■□□□ 1.15
MSLN-202ENST00000545450 ST3GAL1Q11201 340 aa22.25■■□□□ 1.15
MSLN-202ENST00000545450 ADCK5Q3MIX3 580 aa22.25■■□□□ 1.15
MSLN-202ENST00000545450 LINC00116Q8NCU8 138 aa22.25■■□□□ 1.15
MSLN-202ENST00000545450 GPATCH3Q96I76 525 aa22.25■■□□□ 1.15
MSLN-202ENST00000545450 PLA2G12BQ9BX93 195 aa22.25■■□□□ 1.15
MSLN-202ENST00000545450 PRDM10Q9NQV6 1147 aa22.25■■□□□ 1.15
MSLN-202ENST00000545450 BCORQ6W2J9 1755 aa22.24■■□□□ 1.15
MSLN-202ENST00000545450 GOLGA6L6A8MZA4 724 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms