RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 NIM1KQ8IY84 436 aa14.94□□□□□ -0.02
LTBR-214ENST00000545445 RPGRQ92834 1020 aaKnown RBP14.94□□□□□ -0.02
LTBR-214ENST00000545445 SRCIN1Q9C0H9 1055 aa14.94□□□□□ -0.02
LTBR-214ENST00000545445 NYXQ9GZU5 481 aa14.94□□□□□ -0.02
LTBR-214ENST00000545445 ZNF408Q9H9D4 720 aa14.94□□□□□ -0.02
LTBR-214ENST00000545445 CWC25Q9NXE8 425 aaPredicted RBP14.94□□□□□ -0.02
LTBR-214ENST00000545445 TRPM7Q96QT4 1865 aa14.93□□□□□ -0.02
LTBR-214ENST00000545445 NEURL1BA8MQ27 555 aa14.93□□□□□ -0.02
LTBR-214ENST00000545445 PPEF1O14829 653 aaPredicted RBP14.93□□□□□ -0.02
LTBR-214ENST00000545445 PPIP5K2O43314 1243 aa14.93□□□□□ -0.02
LTBR-214ENST00000545445 IGKV5-2P06315 115 aa14.93□□□□□ -0.02
LTBR-214ENST00000545445 CIAPIN1Q6FI81 312 aa14.93□□□□□ -0.02
LTBR-214ENST00000545445 NLRP10Q86W26 655 aa14.93□□□□□ -0.02
LTBR-214ENST00000545445 ADARB2Q9NS39 739 aaKnown RBP14.93□□□□□ -0.02
LTBR-214ENST00000545445 GPRC5DQ9NZD1 345 aa14.93□□□□□ -0.02
LTBR-214ENST00000545445 RIC1Q4ADV7 1423 aa14.92□□□□□ -0.02
LTBR-214ENST00000545445 NUP98P52948 1817 aa14.92□□□□□ -0.02
LTBR-214ENST00000545445 ATP5J2-PTCD1G3V325 749 aa14.92□□□□□ -0.02
LTBR-214ENST00000545445 HSP90B1P14625 803 aaKnown RBP14.92□□□□□ -0.02
LTBR-214ENST00000545445 GPTP24298 496 aa14.92□□□□□ -0.02
LTBR-214ENST00000545445 AOC3Q16853 763 aa14.92□□□□□ -0.02
LTBR-214ENST00000545445 UBN2Q6ZU65 1347 aa14.92□□□□□ -0.02
LTBR-214ENST00000545445 PLIN1O60240 522 aa14.91□□□□□ -0.02
LTBR-214ENST00000545445 HOXA10P31260 410 aaPredicted RBP14.91□□□□□ -0.02
LTBR-214ENST00000545445 GMPSP49915 693 aaPredicted RBP14.91□□□□□ -0.02
LTBR-214ENST00000545445 GCKRQ14397 625 aa14.91□□□□□ -0.02
LTBR-214ENST00000545445 C3orf67Q6ZVT6 689 aa14.91□□□□□ -0.02
LTBR-214ENST00000545445 CLUAP1Q96AJ1 413 aa14.91□□□□□ -0.02
LTBR-214ENST00000545445 ZIC5Q96T25 663 aa14.91□□□□□ -0.02
LTBR-214ENST00000545445 UTP14AQ9BVJ6 771 aaKnown RBP14.91□□□□□ -0.02
LTBR-214ENST00000545445 CHMP4BQ9H444 224 aaKnown RBP14.91□□□□□ -0.02
LTBR-214ENST00000545445 SUPT16HQ9Y5B9 1047 aaKnown RBP14.91□□□□□ -0.02
LTBR-214ENST00000545445 SOX10P56693 466 aa14.9□□□□□ -0.02
LTBR-214ENST00000545445 CWF19L2Q2TBE0 894 aaKnown RBP14.9□□□□□ -0.02
LTBR-214ENST00000545445 SUSD4Q5VX71 490 aa14.9□□□□□ -0.02
LTBR-214ENST00000545445 ZBTB38Q8NAP3 1195 aaPredicted RBP14.9□□□□□ -0.02
LTBR-214ENST00000545445 HHIPL1Q96JK4 782 aa14.9□□□□□ -0.02
LTBR-214ENST00000545445 TRMT112Q9UI30 125 aaKnown RBP14.9□□□□□ -0.02
LTBR-214ENST00000545445 HDAC5Q9UQL6 1122 aa14.9□□□□□ -0.02
LTBR-214ENST00000545445 ANKRD36CQ5JPF3 1778 aa14.9□□□□□ -0.02
LTBR-214ENST00000545445 CASP8AP2Q9UKL3 1982 aa14.89□□□□□ -0.03
LTBR-214ENST00000545445 PCCAP05165 728 aaPredicted RBP14.89□□□□□ -0.03
LTBR-214ENST00000545445 CXCL9Q07325 125 aa14.89□□□□□ -0.03
LTBR-214ENST00000545445 GRIPAP1Q4V328 841 aa14.89□□□□□ -0.03
LTBR-214ENST00000545445 TMEM57Q8N5G2 664 aa14.89□□□□□ -0.03
LTBR-214ENST00000545445 RBM17Q96I25 401 aaKnown RBP14.89□□□□□ -0.03
LTBR-214ENST00000545445 SH3TC1Q8TE82 1336 aa14.89□□□□□ -0.03
LTBR-214ENST00000545445 GRM8O00222 908 aa14.88□□□□□ -0.03
LTBR-214ENST00000545445 NTSR2O95665 410 aa14.88□□□□□ -0.03
LTBR-214ENST00000545445 RLBP1P12271 317 aa14.88□□□□□ -0.03
LTBR-214ENST00000545445 TRPM4Q8TD43 1214 aa14.88□□□□□ -0.03
LTBR-214ENST00000545445 PANK1Q8TE04 598 aa14.88□□□□□ -0.03
LTBR-214ENST00000545445 CRAMP1Q96RY5 1269 aa14.88□□□□□ -0.03
LTBR-214ENST00000545445 C9orf78Q9NZ63 289 aaPredicted RBP14.88□□□□□ -0.03
LTBR-214ENST00000545445 H7C1W4 665 aa14.87□□□□□ -0.03
LTBR-214ENST00000545445 GNAI3P08754 354 aa14.87□□□□□ -0.03
LTBR-214ENST00000545445 HIRAP54198 1017 aaPredicted RBP14.87□□□□□ -0.03
LTBR-214ENST00000545445 NOGQ13253 232 aa14.87□□□□□ -0.03
LTBR-214ENST00000545445 MVPQ14764 893 aaKnown RBP14.87□□□□□ -0.03
LTBR-214ENST00000545445 SLC10A5Q5PT55 438 aa14.87□□□□□ -0.03
LTBR-214ENST00000545445 ITPRIPQ8IWB1 547 aa14.87□□□□□ -0.03
LTBR-214ENST00000545445 ZNRF3Q9ULT6 936 aa14.87□□□□□ -0.03
LTBR-214ENST00000545445 DDX19BQ9UMR2 479 aa14.87□□□□□ -0.03
LTBR-214ENST00000545445 TNNQ9UQP3 1299 aa14.87□□□□□ -0.03
LTBR-214ENST00000545445 UTYO14607 1347 aa14.87□□□□□ -0.03
LTBR-214ENST00000545445 CDHR2Q9BYE9 1310 aa14.87□□□□□ -0.03
LTBR-214ENST00000545445 PDE4DIPQ5VU43 2346 aa14.86□□□□□ -0.03
LTBR-214ENST00000545445 SHTN1A0MZ66 631 aa14.86□□□□□ -0.03
LTBR-214ENST00000545445 HUNKP57058 714 aa14.86□□□□□ -0.03
LTBR-214ENST00000545445 DLK2Q6UY11 383 aa14.86□□□□□ -0.03
LTBR-214ENST00000545445 USP44Q9H0E7 712 aa14.86□□□□□ -0.03
LTBR-214ENST00000545445 PGAP2Q9UHJ9 254 aa14.86□□□□□ -0.03
LTBR-214ENST00000545445 RAD17O75943 681 aa14.85□□□□□ -0.03
LTBR-214ENST00000545445 UBE3BQ7Z3V4 1068 aa14.85□□□□□ -0.03
LTBR-214ENST00000545445 FAM89AQ96GI7 184 aa14.85□□□□□ -0.03
LTBR-214ENST00000545445 ATP6V0A2Q9Y487 856 aa14.85□□□□□ -0.03
LTBR-214ENST00000545445 IRS4O14654 1257 aaPredicted RBP14.84□□□□□ -0.03
LTBR-214ENST00000545445 UBTFL1P0CB47 393 aaPredicted RBP14.84□□□□□ -0.03
LTBR-214ENST00000545445 CASP7P55210 303 aa14.84□□□□□ -0.03
LTBR-214ENST00000545445 C20orf194Q5TEA3 1177 aa14.84□□□□□ -0.03
LTBR-214ENST00000545445 CDC37L1Q7L3B6 337 aa14.84□□□□□ -0.03
LTBR-214ENST00000545445 USP48Q86UV5 1035 aa14.84□□□□□ -0.03
LTBR-214ENST00000545445 ZC3H15Q8WU90 426 aaKnown RBP14.84□□□□□ -0.03
LTBR-214ENST00000545445 PLA2G12BQ9BX93 195 aa14.84□□□□□ -0.03
LTBR-214ENST00000545445 TMX4Q9H1E5 349 aaPredicted RBP14.84□□□□□ -0.03
LTBR-214ENST00000545445 COG6Q9Y2V7 657 aa14.84□□□□□ -0.03
LTBR-214ENST00000545445 ZBTB7BO15156 539 aaPredicted RBP14.83□□□□□ -0.04
LTBR-214ENST00000545445 PDE8AO60658 829 aa14.83□□□□□ -0.04
LTBR-214ENST00000545445 NBPF7P0C2Y1 421 aaPredicted RBP14.83□□□□□ -0.04
LTBR-214ENST00000545445 AAMPQ13685 434 aa14.83□□□□□ -0.04
LTBR-214ENST00000545445 DPP8Q6V1X1 898 aaPredicted RBP14.83□□□□□ -0.04
LTBR-214ENST00000545445 SUPT20HQ8NEM7 779 aa14.83□□□□□ -0.04
LTBR-214ENST00000545445 NLRP3Q96P20 1036 aa14.83□□□□□ -0.04
LTBR-214ENST00000545445 FAM155AB1AL88 458 aaPredicted RBP14.82□□□□□ -0.04
LTBR-214ENST00000545445 PRPF38BQ5VTL8 546 aaKnown RBP14.82□□□□□ -0.04
LTBR-214ENST00000545445 MICALL2Q8IY33 904 aa14.82□□□□□ -0.04
LTBR-214ENST00000545445 MEIS3Q99687 375 aa14.82□□□□□ -0.04
LTBR-214ENST00000545445 RTFDC1Q9BY42 306 aaPredicted RBP14.82□□□□□ -0.04
LTBR-214ENST00000545445 VPS33BQ9H267 617 aa14.82□□□□□ -0.04
LTBR-214ENST00000545445 GNAI2P04899 355 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms