RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 C1orf229Q6ZS94 237 aaPredicted RBP9.74□□□□□ -0.85
COPA-206ENST00000545266 CEP120Q8N960 986 aa9.74□□□□□ -0.85
COPA-206ENST00000545266 ELOA3Q8NG57 546 aa9.74□□□□□ -0.85
COPA-206ENST00000545266 PNMA6FA0A0J9YX94 578 aa9.73□□□□□ -0.85
COPA-206ENST00000545266 OIP5O43482 229 aa9.73□□□□□ -0.85
COPA-206ENST00000545266 FGD1P98174 961 aa9.73□□□□□ -0.85
COPA-206ENST00000545266 ALG1LQ6GMV1 187 aa9.73□□□□□ -0.85
COPA-206ENST00000545266 CCDC74AQ96AQ1 378 aa9.73□□□□□ -0.85
COPA-206ENST00000545266 SLC6A14Q9UN76 642 aa9.73□□□□□ -0.85
COPA-206ENST00000545266 LOC102724428A0A0B4J2F2 783 aa9.72□□□□□ -0.85
COPA-206ENST00000545266 PHF20L1A8MW92 1017 aa9.72□□□□□ -0.85
COPA-206ENST00000545266 PRPF40AO75400 957 aaKnown RBP9.72□□□□□ -0.85
COPA-206ENST00000545266 BCRP11274 1271 aa9.72□□□□□ -0.85
COPA-206ENST00000545266 ADH7P40394 386 aa9.72□□□□□ -0.85
COPA-206ENST00000545266 MAPK8P45983 427 aa9.72□□□□□ -0.85
COPA-206ENST00000545266 SIK1P57059 783 aa9.72□□□□□ -0.85
COPA-206ENST00000545266 UBE2OQ9C0C9 1292 aaKnown RBP9.72□□□□□ -0.85
COPA-206ENST00000545266 LDHBP07195 334 aaKnown RBP9.71□□□□□ -0.86
COPA-206ENST00000545266 EDN3P14138 238 aa9.71□□□□□ -0.86
COPA-206ENST00000545266 PEAR1Q5VY43 1037 aaPredicted RBP9.71□□□□□ -0.86
COPA-206ENST00000545266 TTC9Q92623 222 aa9.71□□□□□ -0.86
COPA-206ENST00000545266 BCL2L13Q9BXK5 485 aa9.71□□□□□ -0.86
COPA-206ENST00000545266 WWC3Q9ULE0 1092 aa9.71□□□□□ -0.86
COPA-206ENST00000545266 CELA2BP08218 269 aaPredicted RBP9.7□□□□□ -0.86
COPA-206ENST00000545266 LORP23490 312 aaPredicted RBP9.7□□□□□ -0.86
COPA-206ENST00000545266 KIAA0319Q5VV43 1072 aa9.7□□□□□ -0.86
COPA-206ENST00000545266 LYPD4Q6UWN0 246 aa9.7□□□□□ -0.86
COPA-206ENST00000545266 EDARADDQ8WWZ3 215 aa9.7□□□□□ -0.86
COPA-206ENST00000545266 FRRS1LQ9P0K9 344 aa9.7□□□□□ -0.86
COPA-206ENST00000545266 KANSL3Q9P2N6 904 aa9.7□□□□□ -0.86
COPA-206ENST00000545266 NAGPAQ9UK23 515 aa9.7□□□□□ -0.86
COPA-206ENST00000545266 STARD13Q9Y3M8 1113 aa9.7□□□□□ -0.86
COPA-206ENST00000545266 NFKBIEO00221 500 aa9.69□□□□□ -0.86
COPA-206ENST00000545266 ZNF16P17020 682 aaPredicted RBP9.69□□□□□ -0.86
COPA-206ENST00000545266 ATP2B2Q01814 1243 aa9.69□□□□□ -0.86
COPA-206ENST00000545266 TAGLNQ01995 201 aaKnown RBP9.69□□□□□ -0.86
COPA-206ENST00000545266 C20orf204Q6ZNR8 217 aa9.69□□□□□ -0.86
COPA-206ENST00000545266 NSUN5Q96P11 429 aaKnown RBP9.69□□□□□ -0.86
COPA-206ENST00000545266 SETDB2Q96T68 719 aa9.69□□□□□ -0.86
COPA-206ENST00000545266 POLR3DP05423 398 aaPredicted RBP9.68□□□□□ -0.86
COPA-206ENST00000545266 GALNT6Q8NCL4 622 aa9.68□□□□□ -0.86
COPA-206ENST00000545266 WHAMMQ8TF30 809 aa9.68□□□□□ -0.86
COPA-206ENST00000545266 FOXD4L4Q8WXT5 416 aaPredicted RBP9.68□□□□□ -0.86
COPA-206ENST00000545266 BTBD6Q96KE9 485 aa9.68□□□□□ -0.86
COPA-206ENST00000545266 FRMD6Q96NE9 622 aa9.68□□□□□ -0.86
COPA-206ENST00000545266 PRDM6Q9NQX0 595 aa9.68□□□□□ -0.86
COPA-206ENST00000545266 DZANK1Q9NVP4 752 aa9.68□□□□□ -0.86
COPA-206ENST00000545266 A0A1W2PP55 124 aa9.67□□□□□ -0.86
COPA-206ENST00000545266 J3QW42 95 aa9.67□□□□□ -0.86
COPA-206ENST00000545266 ALAS2P22557 587 aa9.67□□□□□ -0.86
COPA-206ENST00000545266 MLLT1Q03111 559 aaPredicted RBP9.67□□□□□ -0.86
COPA-206ENST00000545266 PERM1Q5SV97 790 aa9.67□□□□□ -0.86
COPA-206ENST00000545266 ZNF385CQ66K41 422 aaPredicted RBP9.67□□□□□ -0.86
COPA-206ENST00000545266 KANK3Q6NY19 840 aa9.67□□□□□ -0.86
COPA-206ENST00000545266 FAM35AQ86V20 835 aa9.67□□□□□ -0.86
COPA-206ENST00000545266 NCAPG2Q86XI2 1143 aa9.67□□□□□ -0.86
COPA-206ENST00000545266 EPS8L3Q8TE67 593 aaKnown RBP9.67□□□□□ -0.86
COPA-206ENST00000545266 GIPC2Q8TF65 315 aa9.67□□□□□ -0.86
COPA-206ENST00000545266 LPIN3Q9BQK8 851 aa9.67□□□□□ -0.86
COPA-206ENST00000545266 IGFLR1Q9H665 355 aa9.67□□□□□ -0.86
COPA-206ENST00000545266 SHISA8B8ZZ34 492 aa9.66□□□□□ -0.86
COPA-206ENST00000545266 ARHGEF15O94989 841 aa9.66□□□□□ -0.86
COPA-206ENST00000545266 ZNF326Q5BKZ1 582 aaKnown RBP9.66□□□□□ -0.86
COPA-206ENST00000545266 PBX4Q9BYU1 374 aa9.66□□□□□ -0.86
COPA-206ENST00000545266 NPHS2Q9NP85 383 aa9.66□□□□□ -0.86
COPA-206ENST00000545266 LATS2Q9NRM7 1088 aa9.66□□□□□ -0.86
COPA-206ENST00000545266 GIPC1O14908 333 aa9.65□□□□□ -0.86
COPA-206ENST00000545266 HOXB4P17483 251 aaPredicted RBP9.65□□□□□ -0.86
COPA-206ENST00000545266 IRS1P35568 1242 aa9.65□□□□□ -0.86
COPA-206ENST00000545266 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.65□□□□□ -0.86
COPA-206ENST00000545266 HFE2Q6ZVN8 426 aa9.65□□□□□ -0.86
COPA-206ENST00000545266 TMEM102Q8N9M5 508 aaPredicted RBP9.65□□□□□ -0.86
COPA-206ENST00000545266 SPACA7Q96KW9 195 aa9.65□□□□□ -0.86
COPA-206ENST00000545266 DUSP9Q99956 384 aaKnown RBP9.65□□□□□ -0.86
COPA-206ENST00000545266 ZKSCAN3Q9BRR0 538 aa9.65□□□□□ -0.86
COPA-206ENST00000545266 BHLHE41Q9C0J9 482 aaPredicted RBP9.65□□□□□ -0.86
COPA-206ENST00000545266 SUV39H2Q9H5I1 410 aa9.65□□□□□ -0.86
COPA-206ENST00000545266 GHRHP01286 108 aa9.64□□□□□ -0.87
COPA-206ENST00000545266 GNA15P30679 374 aa9.64□□□□□ -0.87
COPA-206ENST00000545266 DAB2P98082 770 aa9.64□□□□□ -0.87
COPA-206ENST00000545266 TBC1D8BQ0IIM8 1120 aa9.64□□□□□ -0.87
COPA-206ENST00000545266 PRPF40BQ6NWY9 871 aaKnown RBP9.64□□□□□ -0.87
COPA-206ENST00000545266 CHSY3Q70JA7 882 aa9.64□□□□□ -0.87
COPA-206ENST00000545266 ILDR2Q71H61 639 aa9.64□□□□□ -0.87
COPA-206ENST00000545266 TMC4Q7Z404 712 aa9.64□□□□□ -0.87
COPA-206ENST00000545266 NXPE3Q969Y0 559 aa9.64□□□□□ -0.87
COPA-206ENST00000545266 CPB1P15086 417 aa9.63□□□□□ -0.87
COPA-206ENST00000545266 ACPPP15309 386 aa9.63□□□□□ -0.87
COPA-206ENST00000545266 GRIK5Q16478 980 aa9.63□□□□□ -0.87
COPA-206ENST00000545266 PI16Q6UXB8 463 aa9.63□□□□□ -0.87
COPA-206ENST00000545266 CCNJLQ8IV13 435 aa9.63□□□□□ -0.87
COPA-206ENST00000545266 MICALL1Q8N3F8 863 aa9.63□□□□□ -0.87
COPA-206ENST00000545266 GLIS3Q8NEA6 775 aa9.63□□□□□ -0.87
COPA-206ENST00000545266 PLD4Q96BZ4 506 aa9.63□□□□□ -0.87
COPA-206ENST00000545266 TCF12Q99081 682 aa9.63□□□□□ -0.87
COPA-206ENST00000545266 OSMRQ99650 979 aa9.63□□□□□ -0.87
COPA-206ENST00000545266 RBSNQ9H1K0 784 aa9.63□□□□□ -0.87
COPA-206ENST00000545266 RASSF4Q9H2L5 321 aa9.63□□□□□ -0.87
COPA-206ENST00000545266 NLRP2Q9NX02 1062 aa9.63□□□□□ -0.87
COPA-206ENST00000545266 PARP2Q9UGN5 583 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms