RNA–Protein interactions for RNA: ENST00000545202.1

AP000439.3-201, humanhuman

TSL 2 BASIC

Gene AP000439.3, Length 2,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.3-201ENST00000545202 BRF1Q92994 677 aa18.46■□□□□ 0.55
AP000439.3-201ENST00000545202 PDCL3Q9H2J4 239 aa18.46■□□□□ 0.55
AP000439.3-201ENST00000545202 TYRO3Q06418 890 aa18.45■□□□□ 0.54
AP000439.3-201ENST00000545202 STOX1Q6ZVD7 989 aa18.45■□□□□ 0.54
AP000439.3-201ENST00000545202 ATG9AQ7Z3C6 839 aa18.45■□□□□ 0.54
AP000439.3-201ENST00000545202 CKAP2LQ8IYA6 745 aa18.45■□□□□ 0.54
AP000439.3-201ENST00000545202 DDX11Q96FC9 970 aa18.45■□□□□ 0.54
AP000439.3-201ENST00000545202 TNMDQ9H2S6 317 aa18.45■□□□□ 0.54
AP000439.3-201ENST00000545202 MRVI1Q9Y6F6 885 aa18.45■□□□□ 0.54
AP000439.3-201ENST00000545202 SH3TC1Q8TE82 1336 aa18.45■□□□□ 0.54
AP000439.3-201ENST00000545202 GOLIM4O00461 696 aa18.45■□□□□ 0.54
AP000439.3-201ENST00000545202 TIMM10P62072 90 aa18.45■□□□□ 0.54
AP000439.3-201ENST00000545202 TTLL7Q6ZT98 887 aa18.45■□□□□ 0.54
AP000439.3-201ENST00000545202 C17orf53Q8N3J3 647 aaPredicted RBP18.45■□□□□ 0.54
AP000439.3-201ENST00000545202 FAM200AQ8TCP9 573 aa18.45■□□□□ 0.54
AP000439.3-201ENST00000545202 TMEM94Q12767 1356 aa18.44■□□□□ 0.54
AP000439.3-201ENST00000545202 PLEKHG2Q9H7P9 1386 aa18.44■□□□□ 0.54
AP000439.3-201ENST00000545202 SCRN1Q12765 414 aa18.44■□□□□ 0.54
AP000439.3-201ENST00000545202 FAM13BQ9NYF5 915 aa18.44■□□□□ 0.54
AP000439.3-201ENST00000545202 FGD1P98174 961 aa18.44■□□□□ 0.54
AP000439.3-201ENST00000545202 RESTQ13127 1097 aa18.44■□□□□ 0.54
AP000439.3-201ENST00000545202 PGBD1Q96JS3 809 aa18.44■□□□□ 0.54
AP000439.3-201ENST00000545202 PAG1Q9NWQ8 432 aa18.44■□□□□ 0.54
AP000439.3-201ENST00000545202 TNS3Q68CZ2 1445 aa18.43■□□□□ 0.54
AP000439.3-201ENST00000545202 H3BQV1 296 aa18.43■□□□□ 0.54
AP000439.3-201ENST00000545202 IFFO2Q5TF58 517 aa18.43■□□□□ 0.54
AP000439.3-201ENST00000545202 DDX19AQ9NUU7 478 aaKnown RBP18.43■□□□□ 0.54
AP000439.3-201ENST00000545202 CWC25Q9NXE8 425 aaPredicted RBP18.43■□□□□ 0.54
AP000439.3-201ENST00000545202 PALLDQ8WX93 1383 aa18.43■□□□□ 0.54
AP000439.3-201ENST00000545202 SPC24Q8NBT2 197 aa18.42■□□□□ 0.54
AP000439.3-201ENST00000545202 DYNC1I1O14576 645 aa18.42■□□□□ 0.54
AP000439.3-201ENST00000545202 NR1I2O75469 434 aa18.42■□□□□ 0.54
AP000439.3-201ENST00000545202 GLIPR1L2Q4G1C9 344 aa18.42■□□□□ 0.54
AP000439.3-201ENST00000545202 LUZP1Q86V48 1076 aa18.42■□□□□ 0.54
AP000439.3-201ENST00000545202 HELLSQ9NRZ9 838 aa18.42■□□□□ 0.54
AP000439.3-201ENST00000545202 NUP188Q5SRE5 1749 aa18.42■□□□□ 0.54
AP000439.3-201ENST00000545202 DHX32Q7L7V1 743 aaKnown RBP18.41■□□□□ 0.54
AP000439.3-201ENST00000545202 SMARCC2Q8TAQ2 1214 aa18.41■□□□□ 0.54
AP000439.3-201ENST00000545202 BICD2Q8TD16 824 aa18.41■□□□□ 0.54
AP000439.3-201ENST00000545202 TJP1Q07157 1748 aa18.41■□□□□ 0.54
AP000439.3-201ENST00000545202 PARP4Q9UKK3 1724 aaKnown RBP18.41■□□□□ 0.54
AP000439.3-201ENST00000545202 A1BGP04217 495 aa18.41■□□□□ 0.54
AP000439.3-201ENST00000545202 HMGB1P09429 215 aaKnown RBP18.41■□□□□ 0.54
AP000439.3-201ENST00000545202 IL15P40933 162 aaPredicted RBP18.41■□□□□ 0.54
AP000439.3-201ENST00000545202 ANO6Q4KMQ2 910 aa18.41■□□□□ 0.54
AP000439.3-201ENST00000545202 LRRC24Q50LG9 513 aa18.41■□□□□ 0.54
AP000439.3-201ENST00000545202 ZNF594Q96JF6 807 aaPredicted RBP18.41■□□□□ 0.54
AP000439.3-201ENST00000545202 CLSTN2Q9H4D0 955 aa18.41■□□□□ 0.54
AP000439.3-201ENST00000545202 GPR108Q9NPR9 543 aa18.41■□□□□ 0.54
AP000439.3-201ENST00000545202 PFKFB2O60825 505 aa18.4■□□□□ 0.54
AP000439.3-201ENST00000545202 RBM43Q6ZSC3 357 aaKnown RBP18.4■□□□□ 0.54
AP000439.3-201ENST00000545202 DSCC1Q9BVC3 393 aa18.4■□□□□ 0.54
AP000439.3-201ENST00000545202 KCNF1Q9H3M0 494 aa18.4■□□□□ 0.54
AP000439.3-201ENST00000545202 ZSCAN16Q9H4T2 348 aaPredicted RBP18.4■□□□□ 0.54
AP000439.3-201ENST00000545202 ZBTB3Q9H5J0 574 aa18.4■□□□□ 0.54
AP000439.3-201ENST00000545202 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
AP000439.3-201ENST00000545202 MYH15Q9Y2K3 1946 aa18.4■□□□□ 0.54
AP000439.3-201ENST00000545202 SPTLC3Q9NUV7 552 aa18.4■□□□□ 0.54
AP000439.3-201ENST00000545202 SPATA31A3Q5VYP0 1347 aa18.4■□□□□ 0.54
AP000439.3-201ENST00000545202 A0A0G2JLW4 131 aa18.39■□□□□ 0.53
AP000439.3-201ENST00000545202 APOBRQ0VD83 1088 aa18.39■□□□□ 0.53
AP000439.3-201ENST00000545202 ZMYM1Q5SVZ6 1142 aa18.39■□□□□ 0.53
AP000439.3-201ENST00000545202 NSUN7Q8NE18 718 aaKnown RBP18.39■□□□□ 0.53
AP000439.3-201ENST00000545202 LLPHQ9BRT6 129 aaKnown RBP18.39■□□□□ 0.53
AP000439.3-201ENST00000545202 CBX8Q9HC52 389 aa18.39■□□□□ 0.53
AP000439.3-201ENST00000545202 EYA2O00167 538 aa18.39■□□□□ 0.53
AP000439.3-201ENST00000545202 CFAP45Q9UL16 551 aa18.39■□□□□ 0.53
AP000439.3-201ENST00000545202 CPDO75976 1380 aa18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 DCCP43146 1447 aa18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 CTDNEP1O95476 244 aa18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 IFIT1P09914 478 aaKnown RBP18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 HSPD1P10809 573 aaKnown RBP18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 EXOSC10Q01780 885 aaKnown RBP18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 CEBPZQ03701 1054 aaKnown RBP18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 UBR2Q8IWV8 1755 aa18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 A0A1B0GUL7 405 aa18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 GOLGA6L6A8MZA4 724 aa18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 TPM3P06753 285 aa18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 FOSBP53539 338 aa18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 CCDC191Q8NCU4 936 aa18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 ZCRB1Q8TBF4 217 aaKnown RBP18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 KIAA1524Q8TCG1 905 aa18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 PYCARDQ9ULZ3 195 aa18.38■□□□□ 0.53
AP000439.3-201ENST00000545202 E7EWF7 191 aa18.37■□□□□ 0.53
AP000439.3-201ENST00000545202 CCT2P78371 535 aaKnown RBP18.37■□□□□ 0.53
AP000439.3-201ENST00000545202 CADPS2Q86UW7 1296 aa18.37■□□□□ 0.53
AP000439.3-201ENST00000545202 MYRIPQ8NFW9 859 aa18.37■□□□□ 0.53
AP000439.3-201ENST00000545202 PUS3Q9BZE2 481 aaKnown RBP18.37■□□□□ 0.53
AP000439.3-201ENST00000545202 MAST3O60307 1309 aa18.37■□□□□ 0.53
AP000439.3-201ENST00000545202 PCDH11XQ9BZA7 1347 aa18.37■□□□□ 0.53
AP000439.3-201ENST00000545202 PCDH11YQ9BZA8 1340 aa18.37■□□□□ 0.53
AP000439.3-201ENST00000545202 PTPDC1A2A3K4 754 aa18.37■□□□□ 0.53
AP000439.3-201ENST00000545202 AGXT2Q9BYV1 514 aa18.37■□□□□ 0.53
AP000439.3-201ENST00000545202 RNF113AO15541 343 aaKnown RBP18.36■□□□□ 0.53
AP000439.3-201ENST00000545202 ADD1P35611 737 aaKnown RBP18.36■□□□□ 0.53
AP000439.3-201ENST00000545202 PRIMPOLQ96LW4 560 aa18.36■□□□□ 0.53
AP000439.3-201ENST00000545202 NAA16Q6N069 864 aaPredicted RBP18.35■□□□□ 0.53
AP000439.3-201ENST00000545202 TOM1L2Q6ZVM7 507 aa18.35■□□□□ 0.53
AP000439.3-201ENST00000545202 CHST3Q7LGC8 479 aa18.35■□□□□ 0.53
AP000439.3-201ENST00000545202 NCOA5Q9HCD5 579 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms