RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 IFIT5Q13325 482 aaKnown RBP19.85■□□□□ 0.77
CCDC78-216ENST00000544996 COL4A1P02462 1669 aa19.84■□□□□ 0.77
CCDC78-216ENST00000544996 LMOD1P29536 600 aaPredicted RBP19.84■□□□□ 0.77
CCDC78-216ENST00000544996 API5Q9BZZ5 524 aaKnown RBP19.84■□□□□ 0.77
CCDC78-216ENST00000544996 NOB1Q9ULX3 412 aaKnown RBP19.84■□□□□ 0.77
CCDC78-216ENST00000544996 MINPP1Q9UNW1 487 aa19.84■□□□□ 0.77
CCDC78-216ENST00000544996 G3V3G9 751 aa19.83■□□□□ 0.77
CCDC78-216ENST00000544996 ATP2B4P23634 1241 aa19.83■□□□□ 0.77
CCDC78-216ENST00000544996 CXCL9Q07325 125 aa19.83■□□□□ 0.77
CCDC78-216ENST00000544996 TNIP1Q15025 636 aa19.83■□□□□ 0.77
CCDC78-216ENST00000544996 CCDC57Q2TAC2 916 aa19.83■□□□□ 0.77
CCDC78-216ENST00000544996 DCAF8Q5TAQ9 597 aa19.83■□□□□ 0.77
CCDC78-216ENST00000544996 CIAPIN1Q6FI81 312 aa19.83■□□□□ 0.77
CCDC78-216ENST00000544996 LMBR1LQ6UX01 489 aa19.83■□□□□ 0.77
CCDC78-216ENST00000544996 TAF1DQ9H5J8 278 aaPredicted RBP19.83■□□□□ 0.77
CCDC78-216ENST00000544996 DUOX1Q9NRD9 1551 aa19.83■□□□□ 0.76
CCDC78-216ENST00000544996 UTYO14607 1347 aa19.82■□□□□ 0.76
CCDC78-216ENST00000544996 ZBED9Q6R2W3 1325 aa19.82■□□□□ 0.76
CCDC78-216ENST00000544996 KIF16BQ96L93 1317 aa19.82■□□□□ 0.76
CCDC78-216ENST00000544996 NBPF7P0C2Y1 421 aaPredicted RBP19.82■□□□□ 0.76
CCDC78-216ENST00000544996 EPHX2P34913 555 aa19.82■□□□□ 0.76
CCDC78-216ENST00000544996 PNMA8AQ86V59 439 aaPredicted RBP19.82■□□□□ 0.76
CCDC78-216ENST00000544996 RAD17O75943 681 aa19.81■□□□□ 0.76
CCDC78-216ENST00000544996 CCT4P50991 539 aaKnown RBP19.81■□□□□ 0.76
CCDC78-216ENST00000544996 TAF7LQ5H9L4 462 aa19.81■□□□□ 0.76
CCDC78-216ENST00000544996 EPHA10Q5JZY3 1008 aa19.81■□□□□ 0.76
CCDC78-216ENST00000544996 ANKRD2Q9GZV1 360 aa19.81■□□□□ 0.76
CCDC78-216ENST00000544996 DBNDD1Q9H9R9 158 aa19.81■□□□□ 0.76
CCDC78-216ENST00000544996 DOK7Q18PE1 504 aa19.8■□□□□ 0.76
CCDC78-216ENST00000544996 EAPPQ56P03 285 aaPredicted RBP19.8■□□□□ 0.76
CCDC78-216ENST00000544996 CHADLQ6NUI6 762 aa19.8■□□□□ 0.76
CCDC78-216ENST00000544996 ARHGAP45Q92619 1136 aa19.8■□□□□ 0.76
CCDC78-216ENST00000544996 SUCLG2Q96I99 432 aa19.8■□□□□ 0.76
CCDC78-216ENST00000544996 GPR101Q96P66 508 aaPredicted RBP19.8■□□□□ 0.76
CCDC78-216ENST00000544996 MYH3P11055 1940 aa19.8■□□□□ 0.76
CCDC78-216ENST00000544996 YDJCA8MPS7 323 aa19.79■□□□□ 0.76
CCDC78-216ENST00000544996 IPO8O15397 1037 aaKnown RBP19.79■□□□□ 0.76
CCDC78-216ENST00000544996 ECE2O60344 883 aa19.79■□□□□ 0.76
CCDC78-216ENST00000544996 SCNN1DP51172 638 aa19.79■□□□□ 0.76
CCDC78-216ENST00000544996 APLP1P51693 650 aa19.79■□□□□ 0.76
CCDC78-216ENST00000544996 LDHDQ86WU2 507 aa19.79■□□□□ 0.76
CCDC78-216ENST00000544996 USP44Q9H0E7 712 aa19.79■□□□□ 0.76
CCDC78-216ENST00000544996 LEMD3Q9Y2U8 911 aa19.79■□□□□ 0.76
CCDC78-216ENST00000544996 CLEC11AQ9Y240 323 aa19.78■□□□□ 0.76
CCDC78-216ENST00000544996 SCN4AP35499 1836 aa19.78■□□□□ 0.76
CCDC78-216ENST00000544996 LTBP1Q14766 1721 aa19.77■□□□□ 0.76
CCDC78-216ENST00000544996 POTEIP0CG38 1075 aa19.77■□□□□ 0.76
CCDC78-216ENST00000544996 POTEJP0CG39 1038 aa19.77■□□□□ 0.76
CCDC78-216ENST00000544996 KCNJ4P48050 445 aa19.77■□□□□ 0.76
CCDC78-216ENST00000544996 GMPSP49915 693 aaPredicted RBP19.77■□□□□ 0.76
CCDC78-216ENST00000544996 CHRNDQ07001 517 aa19.77■□□□□ 0.76
CCDC78-216ENST00000544996 LDHAL6AQ6ZMR3 332 aa19.77■□□□□ 0.76
CCDC78-216ENST00000544996 KAZALD1Q96I82 304 aa19.77■□□□□ 0.76
CCDC78-216ENST00000544996 BICC1Q9H694 974 aaKnown RBP19.77■□□□□ 0.76
CCDC78-216ENST00000544996 GPRC5DQ9NZD1 345 aa19.77■□□□□ 0.76
CCDC78-216ENST00000544996 EPS15P42566 896 aa19.76■□□□□ 0.75
CCDC78-216ENST00000544996 HDAC5Q9UQL6 1122 aa19.76■□□□□ 0.75
CCDC78-216ENST00000544996 ZNF804BA4D1E1 1349 aa19.76■□□□□ 0.75
CCDC78-216ENST00000544996 MED23Q9ULK4 1368 aa19.75■□□□□ 0.75
CCDC78-216ENST00000544996 PSMD14O00487 310 aa19.75■□□□□ 0.75
CCDC78-216ENST00000544996 RABL6Q3YEC7 729 aaPredicted RBP19.75■□□□□ 0.75
CCDC78-216ENST00000544996 USP50Q70EL3 339 aaPredicted RBP19.75■□□□□ 0.75
CCDC78-216ENST00000544996 PODNQ7Z5L7 613 aa19.75■□□□□ 0.75
CCDC78-216ENST00000544996 FRAT1Q92837 279 aaPredicted RBP19.75■□□□□ 0.75
CCDC78-216ENST00000544996 ZNF594Q96JF6 807 aaPredicted RBP19.75■□□□□ 0.75
CCDC78-216ENST00000544996 CNNM1Q9NRU3 951 aa19.75■□□□□ 0.75
CCDC78-216ENST00000544996 ADARB2Q9NS39 739 aaKnown RBP19.75■□□□□ 0.75
CCDC78-216ENST00000544996 BCAR3O75815 825 aa19.74■□□□□ 0.75
CCDC78-216ENST00000544996 UBTFL1P0CB47 393 aaPredicted RBP19.74■□□□□ 0.75
CCDC78-216ENST00000544996 WTIPA6NIX2 430 aaPredicted RBP19.73■□□□□ 0.75
CCDC78-216ENST00000544996 H7C1D1 291 aa19.73■□□□□ 0.75
CCDC78-216ENST00000544996 RPS12P25398 132 aaKnown RBP19.73■□□□□ 0.75
CCDC78-216ENST00000544996 ATF7IPQ6VMQ6 1270 aa19.73■□□□□ 0.75
CCDC78-216ENST00000544996 DPF2Q92785 391 aa19.73■□□□□ 0.75
CCDC78-216ENST00000544996 KCNQ5Q9NR82 932 aa19.73■□□□□ 0.75
CCDC78-216ENST00000544996 ANKRD44Q8N8A2 993 aa19.72■□□□□ 0.75
CCDC78-216ENST00000544996 COA1Q9GZY4 146 aa19.72■□□□□ 0.75
CCDC78-216ENST00000544996 CNOT7Q9UIV1 285 aaKnown RBP19.72■□□□□ 0.75
CCDC78-216ENST00000544996 ZBTB12Q9Y330 459 aaPredicted RBP19.72■□□□□ 0.75
CCDC78-216ENST00000544996 TAF5LO75529 589 aa19.71■□□□□ 0.75
CCDC78-216ENST00000544996 VIL1P09327 827 aaKnown RBP19.71■□□□□ 0.75
CCDC78-216ENST00000544996 TRIM27P14373 513 aa19.71■□□□□ 0.75
CCDC78-216ENST00000544996 INTS3Q68E01 1043 aaKnown RBP19.71■□□□□ 0.75
CCDC78-216ENST00000544996 HELBQ8NG08 1087 aaPredicted RBP19.71■□□□□ 0.75
CCDC78-216ENST00000544996 PLIN1O60240 522 aa19.7■□□□□ 0.74
CCDC78-216ENST00000544996 ZKSCAN2Q63HK3 967 aa19.7■□□□□ 0.74
CCDC78-216ENST00000544996 MICALL2Q8IY33 904 aa19.7■□□□□ 0.74
CCDC78-216ENST00000544996 CNTROBQ8N137 903 aa19.7■□□□□ 0.74
CCDC78-216ENST00000544996 SPEF2Q9C093 1822 aa19.69■□□□□ 0.74
CCDC78-216ENST00000544996 USP17L3A6NCW0 530 aa19.69■□□□□ 0.74
CCDC78-216ENST00000544996 USP17L4A6NCW7 530 aa19.69■□□□□ 0.74
CCDC78-216ENST00000544996 MAP1SQ66K74 1059 aaPredicted RBP19.69■□□□□ 0.74
CCDC78-216ENST00000544996 USP17L1Q7RTZ2 530 aa19.69■□□□□ 0.74
CCDC78-216ENST00000544996 GNAI3P08754 354 aa19.68■□□□□ 0.74
CCDC78-216ENST00000544996 RSBN1LQ6PCB5 846 aaPredicted RBP19.68■□□□□ 0.74
CCDC78-216ENST00000544996 TXNRD3Q86VQ6 643 aa19.68■□□□□ 0.74
CCDC78-216ENST00000544996 AGBL3Q8NEM8 1001 aa19.68■□□□□ 0.74
CCDC78-216ENST00000544996 MROH5Q6ZUA9 1318 aa19.68■□□□□ 0.74
CCDC78-216ENST00000544996 ITGBL1O95965 494 aaPredicted RBP19.67■□□□□ 0.74
CCDC78-216ENST00000544996 KLRK1P26718 216 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms