RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 MPNDQ8N594 471 aa14.6□□□□□ -0.07
SNHG1-221ENST00000544983 RTFDC1Q9BY42 306 aaPredicted RBP14.6□□□□□ -0.07
SNHG1-221ENST00000544983 C1orf115Q9H7X2 142 aa14.6□□□□□ -0.07
SNHG1-221ENST00000544983 MINPP1Q9UNW1 487 aa14.6□□□□□ -0.07
SNHG1-221ENST00000544983 RIPOR2Q9Y4F9 1068 aa14.6□□□□□ -0.07
SNHG1-221ENST00000544983 XDHP47989 1333 aa14.6□□□□□ -0.07
SNHG1-221ENST00000544983 TAF1P21675 1872 aa14.59□□□□□ -0.07
SNHG1-221ENST00000544983 CACNA1SQ13698 1873 aa14.59□□□□□ -0.07
SNHG1-221ENST00000544983 LRRC37AA6NMS7 1700 aa14.59□□□□□ -0.07
SNHG1-221ENST00000544983 PNMA6EA0A0J9YXQ4 647 aa14.59□□□□□ -0.07
SNHG1-221ENST00000544983 EYA2O00167 538 aa14.59□□□□□ -0.07
SNHG1-221ENST00000544983 NEFLP07196 543 aa14.59□□□□□ -0.07
SNHG1-221ENST00000544983 IL15P40933 162 aaPredicted RBP14.59□□□□□ -0.07
SNHG1-221ENST00000544983 DPP8Q6V1X1 898 aaPredicted RBP14.59□□□□□ -0.07
SNHG1-221ENST00000544983 ANKIB1Q9P2G1 1089 aa14.59□□□□□ -0.07
SNHG1-221ENST00000544983 LEMD3Q9Y2U8 911 aa14.59□□□□□ -0.07
SNHG1-221ENST00000544983 FKBP4Q02790 459 aaKnown RBP eCLIP14.58□□□□□ -0.08
SNHG1-221ENST00000544983 ARHGAP27Q6ZUM4 889 aa14.58□□□□□ -0.08
SNHG1-221ENST00000544983 ZNF594Q96JF6 807 aaPredicted RBP14.58□□□□□ -0.08
SNHG1-221ENST00000544983 TAOK3Q9H2K8 898 aa14.58□□□□□ -0.08
SNHG1-221ENST00000544983 WWC3Q9ULE0 1092 aa14.58□□□□□ -0.08
SNHG1-221ENST00000544983 NSFL1CQ9UNZ2 370 aaKnown RBP14.58□□□□□ -0.08
SNHG1-221ENST00000544983 NOP58Q9Y2X3 529 aaKnown RBP14.58□□□□□ -0.08
SNHG1-221ENST00000544983 GOLGB1Q14789 3259 aaKnown RBP14.58□□□□□ -0.08
SNHG1-221ENST00000544983 SNED1Q8TER0 1413 aa14.58□□□□□ -0.08
SNHG1-221ENST00000544983 ATP2B4P23634 1241 aa14.57□□□□□ -0.08
SNHG1-221ENST00000544983 CHRNDQ07001 517 aa14.57□□□□□ -0.08
SNHG1-221ENST00000544983 G3BP1Q13283 466 aaKnown RBP eCLIP14.57□□□□□ -0.08
SNHG1-221ENST00000544983 EYA3Q99504 573 aa14.57□□□□□ -0.08
SNHG1-221ENST00000544983 ZNF219Q9P2Y4 722 aaPredicted RBP14.57□□□□□ -0.08
SNHG1-221ENST00000544983 GGA1Q9UJY5 639 aa14.57□□□□□ -0.08
SNHG1-221ENST00000544983 FER1L6Q2WGJ9 1857 aa14.57□□□□□ -0.08
SNHG1-221ENST00000544983 CEP350Q5VT06 3117 aa14.56□□□□□ -0.08
SNHG1-221ENST00000544983 LMNB1P20700 586 aa14.56□□□□□ -0.08
SNHG1-221ENST00000544983 GPSM2P81274 684 aa14.56□□□□□ -0.08
SNHG1-221ENST00000544983 UBE4AQ14139 1066 aa14.56□□□□□ -0.08
SNHG1-221ENST00000544983 METTL24Q5JXM2 366 aa14.56□□□□□ -0.08
SNHG1-221ENST00000544983 ERC1Q8IUD2 1116 aa14.56□□□□□ -0.08
SNHG1-221ENST00000544983 EXOC6Q8TAG9 804 aa14.56□□□□□ -0.08
SNHG1-221ENST00000544983 CEP126Q9P2H0 1117 aa14.56□□□□□ -0.08
SNHG1-221ENST00000544983 NFKBIEO00221 500 aa14.55□□□□□ -0.08
SNHG1-221ENST00000544983 SURF6O75683 361 aaKnown RBP14.55□□□□□ -0.08
SNHG1-221ENST00000544983 PDE8BO95263 885 aa14.55□□□□□ -0.08
SNHG1-221ENST00000544983 KCNJ4P48050 445 aa14.55□□□□□ -0.08
SNHG1-221ENST00000544983 LRRC24Q50LG9 513 aa14.55□□□□□ -0.08
SNHG1-221ENST00000544983 ATG9AQ7Z3C6 839 aa14.55□□□□□ -0.08
SNHG1-221ENST00000544983 SIRT2Q8IXJ6 389 aa14.55□□□□□ -0.08
SNHG1-221ENST00000544983 KLHDC4Q8TBB5 520 aa14.55□□□□□ -0.08
SNHG1-221ENST00000544983 PUS3Q9BZE2 481 aaKnown RBP14.55□□□□□ -0.08
SNHG1-221ENST00000544983 C6orf229H3BNL8 230 aa14.54□□□□□ -0.08
SNHG1-221ENST00000544983 RAB11FIP3O75154 756 aa14.54□□□□□ -0.08
SNHG1-221ENST00000544983 UFL1O94874 794 aa14.54□□□□□ -0.08
SNHG1-221ENST00000544983 OS9Q13438 667 aaPredicted RBP14.54□□□□□ -0.08
SNHG1-221ENST00000544983 HDAC1Q13547 482 aaPredicted RBP14.54□□□□□ -0.08
SNHG1-221ENST00000544983 WASHC4Q2M389 1173 aa14.54□□□□□ -0.08
SNHG1-221ENST00000544983 ERICH6BQ5W0A0 696 aa14.54□□□□□ -0.08
SNHG1-221ENST00000544983 OLFM4Q6UX06 510 aa14.54□□□□□ -0.08
SNHG1-221ENST00000544983 C15orf52Q6ZUT6 534 aaKnown RBP14.54□□□□□ -0.08
SNHG1-221ENST00000544983 TBC1D16Q8TBP0 767 aa14.54□□□□□ -0.08
SNHG1-221ENST00000544983 SIL1Q9H173 461 aa14.54□□□□□ -0.08
SNHG1-221ENST00000544983 PA2G4Q9UQ80 394 aaKnown RBP14.54□□□□□ -0.08
SNHG1-221ENST00000544983 AKAP2Q9Y2D5 859 aa14.54□□□□□ -0.08
SNHG1-221ENST00000544983 PCDHB15Q9Y5E8 787 aa14.54□□□□□ -0.08
SNHG1-221ENST00000544983 ZNF804BA4D1E1 1349 aa14.54□□□□□ -0.08
SNHG1-221ENST00000544983 COL4A1P02462 1669 aa14.54□□□□□ -0.08
SNHG1-221ENST00000544983 SPEF2Q9C093 1822 aa14.53□□□□□ -0.08
SNHG1-221ENST00000544983 ZC3H4Q9UPT8 1303 aaKnown RBP14.53□□□□□ -0.08
SNHG1-221ENST00000544983 KIAA2012Q0VF49 1180 aa14.53□□□□□ -0.08
SNHG1-221ENST00000544983 PUM3Q15397 648 aaKnown RBP14.53□□□□□ -0.08
SNHG1-221ENST00000544983 VGLL2Q8N8G2 317 aa14.53□□□□□ -0.08
SNHG1-221ENST00000544983 ZC3H12CQ9C0D7 883 aaKnown RBP14.53□□□□□ -0.08
SNHG1-221ENST00000544983 RWDD1Q9H446 243 aaPredicted RBP14.53□□□□□ -0.08
SNHG1-221ENST00000544983 GPR108Q9NPR9 543 aa14.53□□□□□ -0.08
SNHG1-221ENST00000544983 POLLQ9UGP5 575 aa14.53□□□□□ -0.08
SNHG1-221ENST00000544983 LTBP1Q14766 1721 aa14.52□□□□□ -0.08
SNHG1-221ENST00000544983 MED23Q9ULK4 1368 aa14.52□□□□□ -0.08
SNHG1-221ENST00000544983 IARSP41252 1262 aaKnown RBP14.52□□□□□ -0.09
SNHG1-221ENST00000544983 LPIN2Q92539 896 aa14.52□□□□□ -0.09
SNHG1-221ENST00000544983 DCTPP1Q9H773 170 aa14.52□□□□□ -0.09
SNHG1-221ENST00000544983 IFIT1P09914 478 aaKnown RBP14.51□□□□□ -0.09
SNHG1-221ENST00000544983 IRX6P78412 446 aaPredicted RBP14.51□□□□□ -0.09
SNHG1-221ENST00000544983 LARGE2Q8N3Y3 721 aa14.51□□□□□ -0.09
SNHG1-221ENST00000544983 HELBQ8NG08 1087 aaPredicted RBP14.51□□□□□ -0.09
SNHG1-221ENST00000544983 JDP2Q8WYK2 163 aa14.51□□□□□ -0.09
SNHG1-221ENST00000544983 KIF1BPQ96EK5 621 aa14.51□□□□□ -0.09
SNHG1-221ENST00000544983 ZNF277Q9NRM2 450 aaPredicted RBP14.51□□□□□ -0.09
SNHG1-221ENST00000544983 PPIP5K2O43314 1243 aa14.5□□□□□ -0.09
SNHG1-221ENST00000544983 TAF5LO75529 589 aa14.5□□□□□ -0.09
SNHG1-221ENST00000544983 SLC5A1P13866 664 aa14.5□□□□□ -0.09
SNHG1-221ENST00000544983 GCC1Q96CN9 775 aa14.5□□□□□ -0.09
SNHG1-221ENST00000544983 UTRNP46939 3433 aa14.5□□□□□ -0.09
SNHG1-221ENST00000544983 DUOX1Q9NRD9 1551 aa14.5□□□□□ -0.09
SNHG1-221ENST00000544983 SBF1O95248 1867 aa14.49□□□□□ -0.09
SNHG1-221ENST00000544983 G3V3G9 751 aa14.49□□□□□ -0.09
SNHG1-221ENST00000544983 SASH1O94885 1247 aa14.49□□□□□ -0.09
SNHG1-221ENST00000544983 FGFR2P21802 821 aa14.49□□□□□ -0.09
SNHG1-221ENST00000544983 RASSF7Q02833 373 aa14.49□□□□□ -0.09
SNHG1-221ENST00000544983 TFCP2Q12800 502 aa14.49□□□□□ -0.09
SNHG1-221ENST00000544983 ATP2B3Q16720 1220 aa14.49□□□□□ -0.09
SNHG1-221ENST00000544983 CAVIN4Q5BKX8 364 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms