RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 WASHC4Q2M389 1173 aa15.96■□□□□ 0.15
ACTN1-206ENST00000544964 TWISTNBQ3B726 338 aaPredicted RBP15.96■□□□□ 0.15
ACTN1-206ENST00000544964 MICALL2Q8IY33 904 aa15.96■□□□□ 0.15
ACTN1-206ENST00000544964 CAPNS2Q96L46 248 aa15.96■□□□□ 0.15
ACTN1-206ENST00000544964 GPR101Q96P66 508 aaPredicted RBP15.96■□□□□ 0.15
ACTN1-206ENST00000544964 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
ACTN1-206ENST00000544964 SEC31BQ9NQW1 1179 aa15.96■□□□□ 0.15
ACTN1-206ENST00000544964 ZBTB12Q9Y330 459 aaPredicted RBP15.96■□□□□ 0.15
ACTN1-206ENST00000544964 PCCAP05165 728 aaPredicted RBP15.95■□□□□ 0.14
ACTN1-206ENST00000544964 HSPA8P11142 646 aaKnown RBP15.95■□□□□ 0.14
ACTN1-206ENST00000544964 CYP4F22Q6NT55 531 aa15.95■□□□□ 0.14
ACTN1-206ENST00000544964 CCDC191Q8NCU4 936 aa15.95■□□□□ 0.14
ACTN1-206ENST00000544964 TBC1D16Q8TBP0 767 aa15.95■□□□□ 0.14
ACTN1-206ENST00000544964 ZC3H15Q8WU90 426 aaKnown RBP15.95■□□□□ 0.14
ACTN1-206ENST00000544964 CNOT7Q9UIV1 285 aaKnown RBP15.95■□□□□ 0.14
ACTN1-206ENST00000544964 RIMBP2O15034 1052 aa15.94■□□□□ 0.14
ACTN1-206ENST00000544964 ECE2O60344 883 aa15.94■□□□□ 0.14
ACTN1-206ENST00000544964 EGFRP00533 1210 aa15.94■□□□□ 0.14
ACTN1-206ENST00000544964 LBX1P52954 281 aa15.94■□□□□ 0.14
ACTN1-206ENST00000544964 RPS8P62241 208 aaKnown RBP15.94■□□□□ 0.14
ACTN1-206ENST00000544964 SAPCD2Q86UD0 394 aa15.94■□□□□ 0.14
ACTN1-206ENST00000544964 METTL22Q9BUU2 404 aaPredicted RBP15.94■□□□□ 0.14
ACTN1-206ENST00000544964 KCNQ5Q9NR82 932 aa15.94■□□□□ 0.14
ACTN1-206ENST00000544964 PODXL2Q9NZ53 605 aa15.94■□□□□ 0.14
ACTN1-206ENST00000544964 ZNF609O15014 1411 aa15.94■□□□□ 0.14
ACTN1-206ENST00000544964 C6orf229H3BNL8 230 aa15.93■□□□□ 0.14
ACTN1-206ENST00000544964 CELF2O95319 508 aaKnown RBP15.93■□□□□ 0.14
ACTN1-206ENST00000544964 MAP2K1Q02750 393 aaPredicted RBP15.93■□□□□ 0.14
ACTN1-206ENST00000544964 DPF2Q92785 391 aa15.93■□□□□ 0.14
ACTN1-206ENST00000544964 JARID2Q92833 1246 aaPredicted RBP15.93■□□□□ 0.14
ACTN1-206ENST00000544964 CWC25Q9NXE8 425 aaPredicted RBP15.93■□□□□ 0.14
ACTN1-206ENST00000544964 CACNA1FO60840 1977 aa15.93■□□□□ 0.14
ACTN1-206ENST00000544964 VAMP4O75379 141 aa15.92■□□□□ 0.14
ACTN1-206ENST00000544964 IGKV5-2P06315 115 aa15.92■□□□□ 0.14
ACTN1-206ENST00000544964 DOK7Q18PE1 504 aa15.92■□□□□ 0.14
ACTN1-206ENST00000544964 CCDC30Q5VVM6 783 aa15.92■□□□□ 0.14
ACTN1-206ENST00000544964 PAXIP1Q6ZW49 1069 aaPredicted RBP15.92■□□□□ 0.14
ACTN1-206ENST00000544964 SAMD7Q7Z3H4 446 aa15.92■□□□□ 0.14
ACTN1-206ENST00000544964 PDE8AO60658 829 aa15.91■□□□□ 0.14
ACTN1-206ENST00000544964 UFL1O94874 794 aa15.91■□□□□ 0.14
ACTN1-206ENST00000544964 ECE1P42892 770 aa15.91■□□□□ 0.14
ACTN1-206ENST00000544964 GRM1Q13255 1194 aa15.91■□□□□ 0.14
ACTN1-206ENST00000544964 CCDC152Q4G0S7 254 aa15.91■□□□□ 0.14
ACTN1-206ENST00000544964 CCDC85AQ96PX6 553 aaPredicted RBP15.91■□□□□ 0.14
ACTN1-206ENST00000544964 EYA3Q99504 573 aa15.91■□□□□ 0.14
ACTN1-206ENST00000544964 MAP3K2Q9Y2U5 619 aa15.91■□□□□ 0.14
ACTN1-206ENST00000544964 H7C1D1 291 aa15.9■□□□□ 0.14
ACTN1-206ENST00000544964 AOC2O75106 756 aa15.9■□□□□ 0.14
ACTN1-206ENST00000544964 DDX58O95786 925 aaKnown RBP15.9■□□□□ 0.14
ACTN1-206ENST00000544964 HSP90B1P14625 803 aaKnown RBP15.9■□□□□ 0.14
ACTN1-206ENST00000544964 RPS12P25398 132 aaKnown RBP15.9■□□□□ 0.14
ACTN1-206ENST00000544964 TBC1D10BQ4KMP7 808 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-206ENST00000544964 DLK2Q6UY11 383 aa15.9■□□□□ 0.14
ACTN1-206ENST00000544964 CDC37L1Q7L3B6 337 aa15.9■□□□□ 0.14
ACTN1-206ENST00000544964 HHIPL1Q96JK4 782 aa15.9■□□□□ 0.14
ACTN1-206ENST00000544964 A0A1B0GUL6 1792 aa15.9■□□□□ 0.14
ACTN1-206ENST00000544964 PI4KAP2A4QPH2 592 aa15.89■□□□□ 0.13
ACTN1-206ENST00000544964 CTSWP56202 376 aa15.89■□□□□ 0.13
ACTN1-206ENST00000544964 KSR2Q6VAB6 950 aa15.89■□□□□ 0.13
ACTN1-206ENST00000544964 PI4KAP1Q8N8J0 262 aa15.89■□□□□ 0.13
ACTN1-206ENST00000544964 ZNF408Q9H9D4 720 aa15.89■□□□□ 0.13
ACTN1-206ENST00000544964 GGA1Q9UJY5 639 aa15.89■□□□□ 0.13
ACTN1-206ENST00000544964 VIL1P09327 827 aaKnown RBP15.88■□□□□ 0.13
ACTN1-206ENST00000544964 G2E3Q7L622 706 aa15.88■□□□□ 0.13
ACTN1-206ENST00000544964 USP48Q86UV5 1035 aa15.88■□□□□ 0.13
ACTN1-206ENST00000544964 ANKIB1Q9P2G1 1089 aa15.88■□□□□ 0.13
ACTN1-206ENST00000544964 XDHP47989 1333 aa15.88■□□□□ 0.13
ACTN1-206ENST00000544964 NEURL1BA8MQ27 555 aa15.87■□□□□ 0.13
ACTN1-206ENST00000544964 ADM5C9JUS6 153 aa15.87■□□□□ 0.13
ACTN1-206ENST00000544964 MAP2K2P36507 400 aa15.87■□□□□ 0.13
ACTN1-206ENST00000544964 CWF19L2Q2TBE0 894 aaKnown RBP15.87■□□□□ 0.13
ACTN1-206ENST00000544964 KIF4BQ2VIQ3 1234 aa15.87■□□□□ 0.13
ACTN1-206ENST00000544964 KRT26Q7Z3Y9 468 aa15.87■□□□□ 0.13
ACTN1-206ENST00000544964 ANKRD18AQ8IVF6 992 aa15.87■□□□□ 0.13
ACTN1-206ENST00000544964 CHMP4AQ9BY43 222 aa15.87■□□□□ 0.13
ACTN1-206ENST00000544964 ZC3H12CQ9C0D7 883 aaKnown RBP15.87■□□□□ 0.13
ACTN1-206ENST00000544964 ASTN2O75129 1339 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-206ENST00000544964 CASP8AP2Q9UKL3 1982 aa15.86■□□□□ 0.13
ACTN1-206ENST00000544964 WTIPA6NIX2 430 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-206ENST00000544964 TTLL11Q8NHH1 800 aa15.86■□□□□ 0.13
ACTN1-206ENST00000544964 STK31Q9BXU1 1019 aa15.86■□□□□ 0.13
ACTN1-206ENST00000544964 GREM2Q9H772 168 aa15.86■□□□□ 0.13
ACTN1-206ENST00000544964 TSKSQ9UJT2 592 aa15.86■□□□□ 0.13
ACTN1-206ENST00000544964 MED23Q9ULK4 1368 aa15.86■□□□□ 0.13
ACTN1-206ENST00000544964 SLC4A2P04920 1241 aa15.85■□□□□ 0.13
ACTN1-206ENST00000544964 BRPF1P55201 1214 aaPredicted RBP15.85■□□□□ 0.13
ACTN1-206ENST00000544964 ZNF280AP59817 542 aaPredicted RBP15.85■□□□□ 0.13
ACTN1-206ENST00000544964 GGA3Q9NZ52 723 aa15.85■□□□□ 0.13
ACTN1-206ENST00000544964 RBM26Q5T8P6 1007 aaKnown RBP15.84■□□□□ 0.13
ACTN1-206ENST00000544964 RSBN1LQ6PCB5 846 aaPredicted RBP15.84■□□□□ 0.13
ACTN1-206ENST00000544964 SSH1Q8WYL5 1049 aa15.84■□□□□ 0.13
ACTN1-206ENST00000544964 ZIC5Q96T25 663 aa15.84■□□□□ 0.13
ACTN1-206ENST00000544964 GMLQ99445 158 aa15.84■□□□□ 0.13
ACTN1-206ENST00000544964 CDC5LQ99459 802 aaKnown RBP15.84■□□□□ 0.13
ACTN1-206ENST00000544964 H7C1W4 665 aa15.83■□□□□ 0.12
ACTN1-206ENST00000544964 CT47B1P0C2W7 299 aaPredicted RBP15.83■□□□□ 0.12
ACTN1-206ENST00000544964 CASP7P55210 303 aa15.83■□□□□ 0.12
ACTN1-206ENST00000544964 HUNKP57058 714 aa15.83■□□□□ 0.12
ACTN1-206ENST00000544964 NEXNQ0ZGT2 675 aa15.83■□□□□ 0.12
ACTN1-206ENST00000544964 FLIIQ13045 1269 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms