RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 ATP5J2-PTCD1G3V325 749 aa20.25■□□□□ 0.83
CD4-212ENST00000544344 ZNF157P51786 506 aaPredicted RBP20.25■□□□□ 0.83
CD4-212ENST00000544344 LMOD3Q0VAK6 560 aa20.25■□□□□ 0.83
CD4-212ENST00000544344 ANKRD13DQ6ZTN6 518 aa20.25■□□□□ 0.83
CD4-212ENST00000544344 SLC10A3P09131 477 aa20.24■□□□□ 0.83
CD4-212ENST00000544344 VIL1P09327 827 aaKnown RBP20.24■□□□□ 0.83
CD4-212ENST00000544344 KIF4BQ2VIQ3 1234 aa20.24■□□□□ 0.83
CD4-212ENST00000544344 TRPA1O75762 1119 aa20.23■□□□□ 0.83
CD4-212ENST00000544344 CSRNP1Q96S65 589 aa20.23■□□□□ 0.83
CD4-212ENST00000544344 GGA3Q9NZ52 723 aa20.23■□□□□ 0.83
CD4-212ENST00000544344 TRIM35Q9UPQ4 493 aa20.23■□□□□ 0.83
CD4-212ENST00000544344 ZNF609O15014 1411 aa20.22■□□□□ 0.83
CD4-212ENST00000544344 RPS8P62241 208 aaKnown RBP20.22■□□□□ 0.83
CD4-212ENST00000544344 TRIM28Q13263 835 aaKnown RBP20.22■□□□□ 0.83
CD4-212ENST00000544344 RTL5Q5HYW3 569 aaPredicted RBP20.22■□□□□ 0.83
CD4-212ENST00000544344 HDGFL1Q5TGJ6 251 aa20.22■□□□□ 0.83
CD4-212ENST00000544344 EYA3Q99504 573 aa20.22■□□□□ 0.83
CD4-212ENST00000544344 PODXL2Q9NZ53 605 aa20.22■□□□□ 0.83
CD4-212ENST00000544344 PCDH10Q9P2E7 1040 aa20.22■□□□□ 0.83
CD4-212ENST00000544344 PSME4Q14997 1843 aa20.22■□□□□ 0.83
CD4-212ENST00000544344 IRS4O14654 1257 aaPredicted RBP20.21■□□□□ 0.83
CD4-212ENST00000544344 SOX10P56693 466 aa20.21■□□□□ 0.83
CD4-212ENST00000544344 CDCA5Q96FF9 252 aa20.21■□□□□ 0.83
CD4-212ENST00000544344 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
CD4-212ENST00000544344 HOXB7P09629 217 aa20.2■□□□□ 0.82
CD4-212ENST00000544344 ZNF280AP59817 542 aaPredicted RBP20.2■□□□□ 0.82
CD4-212ENST00000544344 NEUROD2Q15784 382 aa20.2■□□□□ 0.82
CD4-212ENST00000544344 SULF1Q8IWU6 871 aa20.2■□□□□ 0.82
CD4-212ENST00000544344 SEC31BQ9NQW1 1179 aa20.2■□□□□ 0.82
CD4-212ENST00000544344 RASAL3Q86YV0 1011 aa20.19■□□□□ 0.82
CD4-212ENST00000544344 CCDC146Q8IYE0 955 aa20.19■□□□□ 0.82
CD4-212ENST00000544344 ZC3H12CQ9C0D7 883 aaKnown RBP20.19■□□□□ 0.82
CD4-212ENST00000544344 GMLQ99445 158 aa20.18■□□□□ 0.82
CD4-212ENST00000544344 LAS1LQ9Y4W2 734 aaKnown RBP20.18■□□□□ 0.82
CD4-212ENST00000544344 PAPPA2Q9BXP8 1791 aa20.17■□□□□ 0.82
CD4-212ENST00000544344 UFL1O94874 794 aa20.17■□□□□ 0.82
CD4-212ENST00000544344 SCARF1Q14162 830 aa20.17■□□□□ 0.82
CD4-212ENST00000544344 ANGEL2Q5VTE6 544 aaKnown RBP20.17■□□□□ 0.82
CD4-212ENST00000544344 HYPKQ9NX55 129 aa20.17■□□□□ 0.82
CD4-212ENST00000544344 RSBN1LQ6PCB5 846 aaPredicted RBP20.16■□□□□ 0.82
CD4-212ENST00000544344 CTU1Q7Z7A3 348 aaKnown RBP20.16■□□□□ 0.82
CD4-212ENST00000544344 ZBTB38Q8NAP3 1195 aaPredicted RBP20.16■□□□□ 0.82
CD4-212ENST00000544344 AGBL3Q8NEM8 1001 aa20.16■□□□□ 0.82
CD4-212ENST00000544344 RALBP1Q15311 655 aa20.15■□□□□ 0.82
CD4-212ENST00000544344 DUSP27Q5VZP5 1158 aa20.15■□□□□ 0.82
CD4-212ENST00000544344 GGA1Q9UJY5 639 aa20.15■□□□□ 0.82
CD4-212ENST00000544344 ZNF646O15015 1829 aaPredicted RBP20.14■□□□□ 0.81
CD4-212ENST00000544344 FKBP1BP68106 108 aa20.14■□□□□ 0.81
CD4-212ENST00000544344 REM2Q8IYK8 340 aaPredicted RBP20.14■□□□□ 0.81
CD4-212ENST00000544344 ANKIB1Q9P2G1 1089 aa20.14■□□□□ 0.81
CD4-212ENST00000544344 PITPNM2Q9BZ72 1349 aa20.13■□□□□ 0.81
CD4-212ENST00000544344 MOB2Q70IA6 237 aa20.13■□□□□ 0.81
CD4-212ENST00000544344 RUNDC1Q96C34 613 aa20.13■□□□□ 0.81
CD4-212ENST00000544344 MYOZ2Q9NPC6 264 aa20.13■□□□□ 0.81
CD4-212ENST00000544344 SCAF8Q9UPN6 1271 aaKnown RBP20.13■□□□□ 0.81
CD4-212ENST00000544344 USP17L8P0C7I0 530 aa20.12■□□□□ 0.81
CD4-212ENST00000544344 PHAXQ9H814 394 aaKnown RBP20.12■□□□□ 0.81
CD4-212ENST00000544344 HPS5Q9UPZ3 1129 aa20.12■□□□□ 0.81
CD4-212ENST00000544344 WTIPA6NIX2 430 aaPredicted RBP20.11■□□□□ 0.81
CD4-212ENST00000544344 G3V3G9 751 aa20.11■□□□□ 0.81
CD4-212ENST00000544344 DCAF8Q5TAQ9 597 aa20.11■□□□□ 0.81
CD4-212ENST00000544344 RIC3Q7Z5B4 369 aa20.11■□□□□ 0.81
CD4-212ENST00000544344 JARID2Q92833 1246 aaPredicted RBP20.11■□□□□ 0.81
CD4-212ENST00000544344 MBIPQ9NS73 344 aa20.11■□□□□ 0.81
CD4-212ENST00000544344 PCCAP05165 728 aaPredicted RBP20.1■□□□□ 0.81
CD4-212ENST00000544344 ZNF853P0CG23 659 aa20.1■□□□□ 0.81
CD4-212ENST00000544344 CCDC152Q4G0S7 254 aa20.1■□□□□ 0.81
CD4-212ENST00000544344 CCDC85AQ96PX6 553 aaPredicted RBP20.1■□□□□ 0.81
CD4-212ENST00000544344 MYD88Q99836 296 aa20.1■□□□□ 0.81
CD4-212ENST00000544344 XDHP47989 1333 aa20.09■□□□□ 0.81
CD4-212ENST00000544344 USP17L3A6NCW0 530 aa20.09■□□□□ 0.81
CD4-212ENST00000544344 USP17L4A6NCW7 530 aa20.09■□□□□ 0.81
CD4-212ENST00000544344 UBE2Q2LH0YL09 131 aa20.09■□□□□ 0.81
CD4-212ENST00000544344 PDE8AO60658 829 aa20.09■□□□□ 0.81
CD4-212ENST00000544344 PRAMEF18Q5VWM3 479 aa20.09■□□□□ 0.81
CD4-212ENST00000544344 USP17L1Q7RTZ2 530 aa20.09■□□□□ 0.81
CD4-212ENST00000544344 PODNQ7Z5L7 613 aa20.09■□□□□ 0.81
CD4-212ENST00000544344 CCDC191Q8NCU4 936 aa20.09■□□□□ 0.81
CD4-212ENST00000544344 ZNF296Q8WUU4 475 aaPredicted RBP20.09■□□□□ 0.81
CD4-212ENST00000544344 TBC1D8O95759 1140 aa20.08■□□□□ 0.81
CD4-212ENST00000544344 GOLGA2Q08379 1002 aa20.08■□□□□ 0.81
CD4-212ENST00000544344 NBPF9Q3BBW0 867 aa20.08■□□□□ 0.81
CD4-212ENST00000544344 PRPF38BQ5VTL8 546 aaKnown RBP20.08■□□□□ 0.81
CD4-212ENST00000544344 ADAMTS8Q9UP79 889 aa20.08■□□□□ 0.81
CD4-212ENST00000544344 HSP90B1P14625 803 aaKnown RBP20.07■□□□□ 0.8
CD4-212ENST00000544344 ATP2B4P23634 1241 aa20.07■□□□□ 0.8
CD4-212ENST00000544344 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
CD4-212ENST00000544344 TM4SF4P48230 202 aa20.06■□□□□ 0.8
CD4-212ENST00000544344 PKN2Q16513 984 aaKnown RBP20.06■□□□□ 0.8
CD4-212ENST00000544344 DACT2Q5SW24 774 aa20.06■□□□□ 0.8
CD4-212ENST00000544344 ANKRD18AQ8IVF6 992 aa20.06■□□□□ 0.8
CD4-212ENST00000544344 MXD3Q9BW11 206 aa20.06■□□□□ 0.8
CD4-212ENST00000544344 CWC25Q9NXE8 425 aaPredicted RBP20.06■□□□□ 0.8
CD4-212ENST00000544344 SPEF2Q9C093 1822 aa20.06■□□□□ 0.8
CD4-212ENST00000544344 NOM1Q5C9Z4 860 aaKnown RBP20.05■□□□□ 0.8
CD4-212ENST00000544344 METTL22Q9BUU2 404 aaPredicted RBP20.05■□□□□ 0.8
CD4-212ENST00000544344 MED23Q9ULK4 1368 aa20.05■□□□□ 0.8
CD4-212ENST00000544344 ELL2O00472 640 aaPredicted RBP20.04■□□□□ 0.8
CD4-212ENST00000544344 WNT10BO00744 389 aa20.04■□□□□ 0.8
CD4-212ENST00000544344 GPR25O00155 361 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms