RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 GBP3Q9H0R5 595 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 SPG7Q9UQ90 795 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 RBM8AQ9Y5S9 174 aaKnown RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 CFAP65Q6ZU64 1925 aaKnown RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 ERCC6L2Q5T890 1561 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 CRYBG1Q9Y4K1 1723 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 NPHP1O15259 732 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 EVCP57679 992 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 TTC31Q49AM3 519 aaPredicted RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 CC2D1AQ6P1N0 951 aaPredicted RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 LARP1Q6PKG0 1096 aaKnown RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 C11orf57Q6ZUT1 292 aaPredicted RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 NECAB1Q8N987 351 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 NEK11Q8NG66 645 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 PPM1EQ8WY54 764 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 DEF6Q9H4E7 631 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 ST7Q9NRC1 585 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 RRP15Q9Y3B9 282 aaKnown RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 URI1O94763 535 aaPredicted RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 OS9Q13438 667 aaPredicted RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 IDI1Q13907 227 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 MCM10Q7L590 875 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 TMC6Q7Z403 805 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 PPP1R42Q7Z4L9 355 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 DHX40Q8IX18 779 aaKnown RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 MYCBPQ99417 103 aaPredicted RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 USP44Q9H0E7 712 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 IL25Q9H293 177 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 IFIT2P09913 472 aaKnown RBP5.79□□□□□ -1.48
LMO3-229ENST00000543721 ST3GAL1Q11201 340 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 EIF4A2Q14240 407 aaKnown RBP5.79□□□□□ -1.48
LMO3-229ENST00000543721 NME9Q86XW9 330 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 C10orf67Q8IYJ2 551 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 AOPEPQ8N6M6 819 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 RGS22Q8NE09 1264 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 GOLGA1Q92805 767 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 ERCC4Q92889 916 aaPredicted RBP5.79□□□□□ -1.48
LMO3-229ENST00000543721 SMARCE1Q969G3 411 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 TRERF1Q96PN7 1200 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 SDF4Q9BRK5 362 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 LARP6Q9BRS8 491 aaKnown RBP5.79□□□□□ -1.48
LMO3-229ENST00000543721 A0A1W2PQ27 194 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 A0A1W2PQ64 194 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 A0A1W2PQD8 194 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 IKBKBO14920 756 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 SLC27A2O14975 620 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 CHRM1P11229 460 aaPredicted RBP5.79□□□□□ -1.48
LMO3-229ENST00000543721 GUCY2CP25092 1073 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 ARID5BQ14865 1188 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 ADCK5Q3MIX3 580 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 HNRNPLLQ8WVV9 542 aaKnown RBP5.79□□□□□ -1.48
LMO3-229ENST00000543721 NCAPGQ9BPX3 1015 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 SPATA31D1Q6ZQQ2 1576 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 ALKQ9UM73 1620 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 XRN1Q8IZH2 1706 aaKnown RBP5.79□□□□□ -1.48
LMO3-229ENST00000543721 ARHGAP6O43182 974 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 SRGAP3O43295 1099 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 TBC1D8O95759 1140 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 HMGB1P09429 215 aaKnown RBP5.79□□□□□ -1.48
LMO3-229ENST00000543721 CPA1P15085 419 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 PTH1RQ03431 593 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 NUTM2DQ5VT03 806 aaPredicted RBP5.79□□□□□ -1.48
LMO3-229ENST00000543721 HDXQ7Z353 690 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 BRF1Q92994 677 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 SIRT1Q96EB6 747 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 ADAM21Q9UKJ8 722 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 CCDC61Q9Y6R9 512 aa5.79□□□□□ -1.48
LMO3-229ENST00000543721 SETD1AO15047 1707 aaKnown RBP5.78□□□□□ -1.48
LMO3-229ENST00000543721 PLEKHG2Q9H7P9 1386 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 WASLO00401 505 aaPredicted RBP5.78□□□□□ -1.48
LMO3-229ENST00000543721 USP8P40818 1118 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 LMAN1P49257 510 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 FAM173BQ6P4H8 233 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 MRPS27Q92552 414 aaKnown RBP5.78□□□□□ -1.48
LMO3-229ENST00000543721 CARD6Q9BX69 1037 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 MAP4K4O95819 1239 aaPredicted RBP5.78□□□□□ -1.48
LMO3-229ENST00000543721 MTX1Q13505 466 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 GNL2Q13823 731 aaKnown RBP5.78□□□□□ -1.48
LMO3-229ENST00000543721 HSP90B2PQ58FF3 399 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 RPAINQ86UA6 219 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 FSIP1Q8NA03 581 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 ENGASEQ8NFI3 743 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 XPO4Q9C0E2 1151 aaKnown RBP5.78□□□□□ -1.48
LMO3-229ENST00000543721 IFNKQ9P0W0 207 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 JRKLQ9Y4A0 524 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 MON2Q7Z3U7 1717 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 NUTM2FA1L443 756 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 CLGNO14967 610 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 NPM1P06748 294 aaKnown RBP eCLIP5.78□□□□□ -1.48
LMO3-229ENST00000543721 MMP14P50281 582 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 NLRP12P59046 1061 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 MAP3K9P80192 1104 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 GORABQ5T7V8 394 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 NUTM2GQ5VZR2 741 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 ADALQ6DHV7 355 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 ARMCX5Q6P1M9 558 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 CCDC91Q7Z6B0 441 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 NBPF11Q86T75 865 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 CEP112Q8N8E3 955 aa5.78□□□□□ -1.48
LMO3-229ENST00000543721 KIAA1468Q9P260 1216 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms