RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 METTL24Q5JXM2 366 aa7.85□□□□□ -1.15
LTBR-212ENST00000543542 KLHDC4Q8TBB5 520 aa7.85□□□□□ -1.15
LTBR-212ENST00000543542 EYA3Q99504 573 aa7.85□□□□□ -1.15
LTBR-212ENST00000543542 ANKRD2Q9GZV1 360 aa7.85□□□□□ -1.15
LTBR-212ENST00000543542 GGA1Q9UJY5 639 aa7.85□□□□□ -1.15
LTBR-212ENST00000543542 FER1L6Q2WGJ9 1857 aa7.85□□□□□ -1.15
LTBR-212ENST00000543542 XDHP47989 1333 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 COL4A1P02462 1669 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 RIMBP2O15034 1052 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 PPIP5K2O43314 1243 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 HMMRO75330 724 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 UFL1O94874 794 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 ATP2B4P23634 1241 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 GPSM2P81274 684 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 ATP8B2P98198 1209 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 CHRNDQ07001 517 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 HELBQ8NG08 1087 aaPredicted RBP7.84□□□□□ -1.15
LTBR-212ENST00000543542 C7orf43Q8WVR3 580 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 ZC3H12CQ9C0D7 883 aaKnown RBP7.84□□□□□ -1.15
LTBR-212ENST00000543542 BCL11AQ9H165 835 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 ZNF277Q9NRM2 450 aaPredicted RBP7.84□□□□□ -1.15
LTBR-212ENST00000543542 ZBTB40Q9NUA8 1239 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 RNF181Q9P0P0 153 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 MINPP1Q9UNW1 487 aa7.84□□□□□ -1.15
LTBR-212ENST00000543542 PA2G4Q9UQ80 394 aaKnown RBP7.84□□□□□ -1.15
LTBR-212ENST00000543542 LRRC37AA6NMS7 1700 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 MROH5Q6ZUA9 1318 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 PNMA6EA0A0J9YXQ4 647 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 EYA2O00167 538 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 NFKBIEO00221 500 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 TAF5LO75529 589 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 SURF6O75683 361 aaKnown RBP7.83□□□□□ -1.16
LTBR-212ENST00000543542 LMNB1P20700 586 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 IARSP41252 1262 aaKnown RBP7.83□□□□□ -1.16
LTBR-212ENST00000543542 PTPN12Q05209 780 aaKnown RBP7.83□□□□□ -1.16
LTBR-212ENST00000543542 WASHC4Q2M389 1173 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 LRRC24Q50LG9 513 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 C9orf131Q5VYM1 1079 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 CEP85Q6P2H3 762 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 SLC51AQ86UW1 340 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 RPAP2Q8IXW5 612 aaPredicted RBP7.83□□□□□ -1.16
LTBR-212ENST00000543542 LARGE2Q8N3Y3 721 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 JDP2Q8WYK2 163 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 PSMD1Q99460 953 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 PUS3Q9BZE2 481 aaKnown RBP7.83□□□□□ -1.16
LTBR-212ENST00000543542 GOLGB1Q14789 3259 aaKnown RBP7.83□□□□□ -1.16
LTBR-212ENST00000543542 CHD4Q14839 1912 aa7.83□□□□□ -1.16
LTBR-212ENST00000543542 APBB1O00213 710 aa7.82□□□□□ -1.16
LTBR-212ENST00000543542 SBF1O95248 1867 aa7.82□□□□□ -1.16
LTBR-212ENST00000543542 IL15P40933 162 aaPredicted RBP7.82□□□□□ -1.16
LTBR-212ENST00000543542 RFX5P48382 616 aaPredicted RBP7.82□□□□□ -1.16
LTBR-212ENST00000543542 MTX1Q13505 466 aa7.82□□□□□ -1.16
LTBR-212ENST00000543542 AOC3Q16853 763 aa7.82□□□□□ -1.16
LTBR-212ENST00000543542 NIM1KQ8IY84 436 aa7.82□□□□□ -1.16
LTBR-212ENST00000543542 EXOC6Q8TAG9 804 aa7.82□□□□□ -1.16
LTBR-212ENST00000543542 TBC1D16Q8TBP0 767 aa7.82□□□□□ -1.16
LTBR-212ENST00000543542 GPR101Q96P66 508 aaPredicted RBP7.82□□□□□ -1.16
LTBR-212ENST00000543542 COPRSQ9NQ92 184 aa7.82□□□□□ -1.16
LTBR-212ENST00000543542 PODXL2Q9NZ53 605 aa7.82□□□□□ -1.16
LTBR-212ENST00000543542 CEP126Q9P2H0 1117 aa7.82□□□□□ -1.16
LTBR-212ENST00000543542 FBXO3Q9UK99 471 aa7.82□□□□□ -1.16
LTBR-212ENST00000543542 LEMD3Q9Y2U8 911 aa7.82□□□□□ -1.16
LTBR-212ENST00000543542 A0A1B0GUL6 1792 aa7.82□□□□□ -1.16
LTBR-212ENST00000543542 ZNF804BA4D1E1 1349 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 LTBP3Q9NS15 1303 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 TIAM2Q8IVF5 1701 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 CIAO1O76071 339 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 AAMPQ13685 434 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 POLA2Q14181 598 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 HSP90AB4PQ58FF6 505 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 VPS37DQ86XT2 251 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 SSH3Q8TE77 659 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 FBXW7Q969H0 707 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 VPS33BQ9H267 617 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 ZBTB47Q9UFB7 747 aaPredicted RBP7.81□□□□□ -1.16
LTBR-212ENST00000543542 POLLQ9UGP5 575 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 EXOC6BQ9Y2D4 811 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 RIPOR2Q9Y4F9 1068 aa7.81□□□□□ -1.16
LTBR-212ENST00000543542 DICER1Q9UPY3 1922 aaKnown RBP7.81□□□□□ -1.16
LTBR-212ENST00000543542 FRAT2O75474 233 aaPredicted RBP7.8□□□□□ -1.16
LTBR-212ENST00000543542 PDE8BO95263 885 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 IFIT1P09914 478 aaKnown RBP7.8□□□□□ -1.16
LTBR-212ENST00000543542 SLC5A1P13866 664 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 EIF6P56537 245 aaKnown RBP7.8□□□□□ -1.16
LTBR-212ENST00000543542 KIAA2012Q0VF49 1180 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 TFCP2Q12800 502 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 UBE4AQ14139 1066 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 PUM3Q15397 648 aaKnown RBP7.8□□□□□ -1.16
LTBR-212ENST00000543542 ATP2B3Q16720 1220 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 DOK7Q18PE1 504 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 CAVIN4Q5BKX8 364 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 GORABQ5T7V8 394 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 ZNF804AQ7Z570 1209 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 ERC1Q8IUD2 1116 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 NEUROD6Q96NK8 337 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 RTFDC1Q9BY42 306 aaPredicted RBP7.8□□□□□ -1.16
LTBR-212ENST00000543542 DBNDD1Q9H9R9 158 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 AKAP2Q9Y2D5 859 aa7.8□□□□□ -1.16
LTBR-212ENST00000543542 LTBP1Q14766 1721 aa7.79□□□□□ -1.16
LTBR-212ENST00000543542 SNAP23O00161 211 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms