RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 GMPSP49915 693 aaPredicted RBP23.7■■□□□ 1.38
TMED3-204ENST00000543455 GPRC5DQ9NZD1 345 aa23.7■■□□□ 1.38
TMED3-204ENST00000543455 CSF1RP07333 972 aa23.69■■□□□ 1.38
TMED3-204ENST00000543455 LMOD1P29536 600 aaPredicted RBP23.69■■□□□ 1.38
TMED3-204ENST00000543455 TRMT2AQ8IZ69 625 aaKnown RBP23.69■■□□□ 1.38
TMED3-204ENST00000543455 MRPL50Q8N5N7 158 aaKnown RBP23.69■■□□□ 1.38
TMED3-204ENST00000543455 KCNQ5Q9NR82 932 aa23.69■■□□□ 1.38
TMED3-204ENST00000543455 UFL1O94874 794 aa23.68■■□□□ 1.38
TMED3-204ENST00000543455 DOK7Q18PE1 504 aa23.68■■□□□ 1.38
TMED3-204ENST00000543455 FAM161AQ3B820 660 aa23.68■■□□□ 1.38
TMED3-204ENST00000543455 MAP1SQ66K74 1059 aaPredicted RBP23.68■■□□□ 1.38
TMED3-204ENST00000543455 CDC5LQ99459 802 aaKnown RBP23.68■■□□□ 1.38
TMED3-204ENST00000543455 SHTN1A0MZ66 631 aa23.68■■□□□ 1.38
TMED3-204ENST00000543455 ECE2O60344 883 aa23.68■■□□□ 1.38
TMED3-204ENST00000543455 EYA3Q99504 573 aa23.68■■□□□ 1.38
TMED3-204ENST00000543455 BSDC1Q9NW68 430 aaPredicted RBP23.68■■□□□ 1.38
TMED3-204ENST00000543455 ANKIB1Q9P2G1 1089 aa23.68■■□□□ 1.38
TMED3-204ENST00000543455 GGA1Q9UJY5 639 aa23.68■■□□□ 1.38
TMED3-204ENST00000543455 CLEC11AQ9Y240 323 aa23.68■■□□□ 1.38
TMED3-204ENST00000543455 FOXO4P98177 505 aa23.67■■□□□ 1.38
TMED3-204ENST00000543455 TNIP1Q15025 636 aa23.67■■□□□ 1.38
TMED3-204ENST00000543455 MINPP1Q9UNW1 487 aa23.67■■□□□ 1.38
TMED3-204ENST00000543455 PSME4Q14997 1843 aa23.67■■□□□ 1.38
TMED3-204ENST00000543455 XDHP47989 1333 aa23.66■■□□□ 1.38
TMED3-204ENST00000543455 PCNTO95613 3336 aa23.66■■□□□ 1.38
TMED3-204ENST00000543455 PSMD14O00487 310 aa23.66■■□□□ 1.38
TMED3-204ENST00000543455 ITGA6P23229 1130 aa23.66■■□□□ 1.38
TMED3-204ENST00000543455 JMYQ8N9B5 988 aa23.66■■□□□ 1.38
TMED3-204ENST00000543455 SSH1Q8WYL5 1049 aa23.66■■□□□ 1.38
TMED3-204ENST00000543455 EPHA10Q5JZY3 1008 aa23.65■■□□□ 1.38
TMED3-204ENST00000543455 USP50Q70EL3 339 aaPredicted RBP23.65■■□□□ 1.38
TMED3-204ENST00000543455 CNTROBQ8N137 903 aa23.65■■□□□ 1.38
TMED3-204ENST00000543455 ADARB2Q9NS39 739 aaKnown RBP23.65■■□□□ 1.38
TMED3-204ENST00000543455 ZBTB12Q9Y330 459 aaPredicted RBP23.65■■□□□ 1.38
TMED3-204ENST00000543455 A0A1B0GUL6 1792 aa23.64■■□□□ 1.38
TMED3-204ENST00000543455 CREBZFQ9NS37 354 aa23.64■■□□□ 1.38
TMED3-204ENST00000543455 ZNF646O15015 1829 aaPredicted RBP23.64■■□□□ 1.37
TMED3-204ENST00000543455 ZC3H12CQ9C0D7 883 aaKnown RBP23.63■■□□□ 1.37
TMED3-204ENST00000543455 GRM8O00222 908 aa23.62■■□□□ 1.37
TMED3-204ENST00000543455 ALDH1L1O75891 902 aa23.62■■□□□ 1.37
TMED3-204ENST00000543455 ATP2B4P23634 1241 aa23.62■■□□□ 1.37
TMED3-204ENST00000543455 HIRAP54198 1017 aaPredicted RBP23.62■■□□□ 1.37
TMED3-204ENST00000543455 FMR1Q06787 632 aaKnown RBP eCLIP23.62■■□□□ 1.37
TMED3-204ENST00000543455 SLC4A10Q6U841 1118 aa23.62■■□□□ 1.37
TMED3-204ENST00000543455 TRPM4Q8TD43 1214 aa23.62■■□□□ 1.37
TMED3-204ENST00000543455 BCL2L13Q9BXK5 485 aa23.62■■□□□ 1.37
TMED3-204ENST00000543455 SRCIN1Q9C0H9 1055 aa23.61■■□□□ 1.37
TMED3-204ENST00000543455 CNOT7Q9UIV1 285 aaKnown RBP23.61■■□□□ 1.37
TMED3-204ENST00000543455 IGHMBP2P38935 993 aaKnown RBP23.6■■□□□ 1.37
TMED3-204ENST00000543455 CCT4P50991 539 aaKnown RBP23.6■■□□□ 1.37
TMED3-204ENST00000543455 MICALL2Q8IY33 904 aa23.6■■□□□ 1.37
TMED3-204ENST00000543455 DPF2Q92785 391 aa23.6■■□□□ 1.37
TMED3-204ENST00000543455 KAZALD1Q96I82 304 aa23.6■■□□□ 1.37
TMED3-204ENST00000543455 MED23Q9ULK4 1368 aa23.6■■□□□ 1.37
TMED3-204ENST00000543455 TRPM7Q96QT4 1865 aa23.59■■□□□ 1.37
TMED3-204ENST00000543455 VIL1P09327 827 aaKnown RBP23.59■■□□□ 1.37
TMED3-204ENST00000543455 PGAP2Q9UHJ9 254 aa23.59■■□□□ 1.37
TMED3-204ENST00000543455 EGFRP00533 1210 aa23.58■■□□□ 1.37
TMED3-204ENST00000543455 LMBR1LQ6UX01 489 aa23.58■■□□□ 1.37
TMED3-204ENST00000543455 TXNRD3Q86VQ6 643 aa23.58■■□□□ 1.37
TMED3-204ENST00000543455 UTYO14607 1347 aa23.57■■□□□ 1.36
TMED3-204ENST00000543455 PTPRCP08575 1304 aa23.57■■□□□ 1.36
TMED3-204ENST00000543455 TMEM88BA6NKF7 163 aa23.57■■□□□ 1.36
TMED3-204ENST00000543455 TRAF5O00463 557 aa23.57■■□□□ 1.36
TMED3-204ENST00000543455 NBPF7P0C2Y1 421 aaPredicted RBP23.57■■□□□ 1.36
TMED3-204ENST00000543455 KLRK1P26718 216 aa23.57■■□□□ 1.36
TMED3-204ENST00000543455 SUCLG2Q96I99 432 aa23.57■■□□□ 1.36
TMED3-204ENST00000543455 ZNF609O15014 1411 aa23.57■■□□□ 1.36
TMED3-204ENST00000543455 ANKRD18BA2A2Z9 1011 aa23.56■■□□□ 1.36
TMED3-204ENST00000543455 ALDH1L2Q3SY69 923 aa23.56■■□□□ 1.36
TMED3-204ENST00000543455 C9orf78Q9NZ63 289 aaPredicted RBP23.56■■□□□ 1.36
TMED3-204ENST00000543455 MKRN1Q9UHC7 482 aaKnown RBP23.56■■□□□ 1.36
TMED3-204ENST00000543455 CNTNAP1P78357 1384 aa23.56■■□□□ 1.36
TMED3-204ENST00000543455 RPS12P25398 132 aaKnown RBP23.56■■□□□ 1.36
TMED3-204ENST00000543455 CHRNDQ07001 517 aa23.56■■□□□ 1.36
TMED3-204ENST00000543455 SAMD7Q7Z3H4 446 aa23.56■■□□□ 1.36
TMED3-204ENST00000543455 MPHOSPH8Q99549 860 aa23.56■■□□□ 1.36
TMED3-204ENST00000543455 POLR2AP24928 1970 aaKnown RBP23.55■■□□□ 1.36
TMED3-204ENST00000543455 IRS2Q9Y4H2 1338 aa23.55■■□□□ 1.36
TMED3-204ENST00000543455 SNAP23O00161 211 aa23.55■■□□□ 1.36
TMED3-204ENST00000543455 IFIT5Q13325 482 aaKnown RBP23.55■■□□□ 1.36
TMED3-204ENST00000543455 ZNF594Q96JF6 807 aaPredicted RBP23.55■■□□□ 1.36
TMED3-204ENST00000543455 GMLQ99445 158 aa23.55■■□□□ 1.36
TMED3-204ENST00000543455 LEMD3Q9Y2U8 911 aa23.55■■□□□ 1.36
TMED3-204ENST00000543455 H7C1D1 291 aa23.54■■□□□ 1.36
TMED3-204ENST00000543455 CHMP3Q9Y3E7 222 aa23.54■■□□□ 1.36
TMED3-204ENST00000543455 ZNF804BA4D1E1 1349 aa23.53■■□□□ 1.36
TMED3-204ENST00000543455 G3V3G9 751 aa23.53■■□□□ 1.36
TMED3-204ENST00000543455 TBC1D10BQ4KMP7 808 aaPredicted RBP23.53■■□□□ 1.36
TMED3-204ENST00000543455 DCAF8Q5TAQ9 597 aa23.53■■□□□ 1.36
TMED3-204ENST00000543455 CST9Q5W186 159 aa23.53■■□□□ 1.36
TMED3-204ENST00000543455 RSBN1LQ6PCB5 846 aaPredicted RBP23.53■■□□□ 1.36
TMED3-204ENST00000543455 PODNQ7Z5L7 613 aa23.53■■□□□ 1.36
TMED3-204ENST00000543455 ZC3H15Q8WU90 426 aaKnown RBP23.53■■□□□ 1.36
TMED3-204ENST00000543455 GLIS2Q9BZE0 524 aaPredicted RBP23.53■■□□□ 1.36
TMED3-204ENST00000543455 ANKRD2Q9GZV1 360 aa23.53■■□□□ 1.36
TMED3-204ENST00000543455 SMC4Q9NTJ3 1288 aa23.53■■□□□ 1.36
TMED3-204ENST00000543455 HELBQ8NG08 1087 aaPredicted RBP23.52■■□□□ 1.36
TMED3-204ENST00000543455 TAF5LO75529 589 aa23.51■■□□□ 1.35
TMED3-204ENST00000543455 CT47B1P0C2W7 299 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms