RNA–Protein interactions for RNA: ENST00000543199.5

GPN3-203, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5 BASIC

Gene GPN3, Length 1,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-203ENST00000543199 TSKSQ9UJT2 592 aa16.56■□□□□ 0.24
GPN3-203ENST00000543199 RPS8P62241 208 aaKnown RBP16.56■□□□□ 0.24
GPN3-203ENST00000543199 DLK2Q6UY11 383 aa16.56■□□□□ 0.24
GPN3-203ENST00000543199 ZBTB38Q8NAP3 1195 aaPredicted RBP16.56■□□□□ 0.24
GPN3-203ENST00000543199 SEC31BQ9NQW1 1179 aa16.56■□□□□ 0.24
GPN3-203ENST00000543199 EGFRP00533 1210 aa16.55■□□□□ 0.24
GPN3-203ENST00000543199 GNAI1P63096 354 aa16.55■□□□□ 0.24
GPN3-203ENST00000543199 TBC1D10BQ4KMP7 808 aaPredicted RBP16.55■□□□□ 0.24
GPN3-203ENST00000543199 USP48Q86UV5 1035 aa16.55■□□□□ 0.24
GPN3-203ENST00000543199 TBC1D16Q8TBP0 767 aa16.55■□□□□ 0.24
GPN3-203ENST00000543199 EYA3Q99504 573 aa16.55■□□□□ 0.24
GPN3-203ENST00000543199 RTL9Q8NET4 1388 aa16.54■□□□□ 0.24
GPN3-203ENST00000543199 MAP2K2P36507 400 aa16.54■□□□□ 0.24
GPN3-203ENST00000543199 RBM26Q5T8P6 1007 aaKnown RBP16.54■□□□□ 0.24
GPN3-203ENST00000543199 DPF2Q92785 391 aa16.54■□□□□ 0.24
GPN3-203ENST00000543199 JARID2Q92833 1246 aaPredicted RBP16.54■□□□□ 0.24
GPN3-203ENST00000543199 ABHD8Q96I13 439 aa16.54■□□□□ 0.24
GPN3-203ENST00000543199 CCDC85AQ96PX6 553 aaPredicted RBP16.54■□□□□ 0.24
GPN3-203ENST00000543199 CALD1Q05682 793 aaKnown RBP16.53■□□□□ 0.24
GPN3-203ENST00000543199 C8orf58Q8NAV2 365 aa16.53■□□□□ 0.24
GPN3-203ENST00000543199 ANKIB1Q9P2G1 1089 aa16.53■□□□□ 0.24
GPN3-203ENST00000543199 UFL1O94874 794 aa16.52■□□□□ 0.24
GPN3-203ENST00000543199 KRT26Q7Z3Y9 468 aa16.52■□□□□ 0.24
GPN3-203ENST00000543199 HHIPL1Q96JK4 782 aa16.52■□□□□ 0.24
GPN3-203ENST00000543199 HSP90B1P14625 803 aaKnown RBP16.52■□□□□ 0.23
GPN3-203ENST00000543199 RPS12P25398 132 aaKnown RBP16.52■□□□□ 0.23
GPN3-203ENST00000543199 CCDC152Q4G0S7 254 aa16.52■□□□□ 0.23
GPN3-203ENST00000543199 CCDC191Q8NCU4 936 aa16.52■□□□□ 0.23
GPN3-203ENST00000543199 ZC3H12CQ9C0D7 883 aaKnown RBP16.52■□□□□ 0.23
GPN3-203ENST00000543199 CWC25Q9NXE8 425 aaPredicted RBP16.52■□□□□ 0.23
GPN3-203ENST00000543199 G3V3G9 751 aa16.51■□□□□ 0.23
GPN3-203ENST00000543199 PCCAP05165 728 aaPredicted RBP16.51■□□□□ 0.23
GPN3-203ENST00000543199 HUNKP57058 714 aa16.51■□□□□ 0.23
GPN3-203ENST00000543199 DCAF8Q5TAQ9 597 aa16.51■□□□□ 0.23
GPN3-203ENST00000543199 PODXL2Q9NZ53 605 aa16.51■□□□□ 0.23
GPN3-203ENST00000543199 ADM5C9JUS6 153 aa16.5■□□□□ 0.23
GPN3-203ENST00000543199 PDE8AO60658 829 aa16.5■□□□□ 0.23
GPN3-203ENST00000543199 BRPF1P55201 1214 aaPredicted RBP16.5■□□□□ 0.23
GPN3-203ENST00000543199 CCDC30Q5VVM6 783 aa16.5■□□□□ 0.23
GPN3-203ENST00000543199 POTEHQ6S545 545 aa16.5■□□□□ 0.23
GPN3-203ENST00000543199 DCPSQ96C86 337 aaKnown RBP16.5■□□□□ 0.23
GPN3-203ENST00000543199 METTL22Q9BUU2 404 aaPredicted RBP16.5■□□□□ 0.23
GPN3-203ENST00000543199 GGA1Q9UJY5 639 aa16.5■□□□□ 0.23
GPN3-203ENST00000543199 SCN9AQ15858 1988 aa16.5■□□□□ 0.23
GPN3-203ENST00000543199 DDX58O95786 925 aaKnown RBP16.49■□□□□ 0.23
GPN3-203ENST00000543199 KIF4BQ2VIQ3 1234 aa16.49■□□□□ 0.23
GPN3-203ENST00000543199 TSPYL6Q8N831 410 aa16.49■□□□□ 0.23
GPN3-203ENST00000543199 ZIC5Q96T25 663 aa16.49■□□□□ 0.23
GPN3-203ENST00000543199 MAP3K2Q9Y2U5 619 aa16.49■□□□□ 0.23
GPN3-203ENST00000543199 VIL1P09327 827 aaKnown RBP16.48■□□□□ 0.23
GPN3-203ENST00000543199 CA12O43570 354 aa16.48■□□□□ 0.23
GPN3-203ENST00000543199 NOGQ13253 232 aa16.48■□□□□ 0.23
GPN3-203ENST00000543199 TSR2Q969E8 191 aaKnown RBP16.48■□□□□ 0.23
GPN3-203ENST00000543199 GBA2Q9HCG7 927 aaPredicted RBP16.48■□□□□ 0.23
GPN3-203ENST00000543199 GGA3Q9NZ52 723 aa16.48■□□□□ 0.23
GPN3-203ENST00000543199 ASTN2O75129 1339 aaPredicted RBP16.47■□□□□ 0.23
GPN3-203ENST00000543199 ANKRD18AQ8IVF6 992 aa16.47■□□□□ 0.23
GPN3-203ENST00000543199 XDHP47989 1333 aa16.47■□□□□ 0.23
GPN3-203ENST00000543199 POLR2AP24928 1970 aaKnown RBP16.46■□□□□ 0.23
GPN3-203ENST00000543199 PI4KAP2A4QPH2 592 aa16.46■□□□□ 0.23
GPN3-203ENST00000543199 CCDC85CA6NKD9 419 aa16.46■□□□□ 0.23
GPN3-203ENST00000543199 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
GPN3-203ENST00000543199 SULF1Q8IWU6 871 aa16.46■□□□□ 0.23
GPN3-203ENST00000543199 PI4KAP1Q8N8J0 262 aa16.46■□□□□ 0.23
GPN3-203ENST00000543199 C2orf69Q8N8R5 385 aa16.46■□□□□ 0.23
GPN3-203ENST00000543199 IGKV5-2P06315 115 aa16.45■□□□□ 0.22
GPN3-203ENST00000543199 CTSWP56202 376 aa16.45■□□□□ 0.22
GPN3-203ENST00000543199 RGMBQ6NW40 437 aa16.45■□□□□ 0.22
GPN3-203ENST00000543199 KSR2Q6VAB6 950 aa16.45■□□□□ 0.22
GPN3-203ENST00000543199 RSBN1LQ6PCB5 846 aaPredicted RBP16.45■□□□□ 0.22
GPN3-203ENST00000543199 CHMP4AQ9BY43 222 aa16.45■□□□□ 0.22
GPN3-203ENST00000543199 WTIPA6NIX2 430 aaPredicted RBP16.44■□□□□ 0.22
GPN3-203ENST00000543199 FAM155AB1AL88 458 aaPredicted RBP16.44■□□□□ 0.22
GPN3-203ENST00000543199 CWF19L2Q2TBE0 894 aaKnown RBP16.44■□□□□ 0.22
GPN3-203ENST00000543199 FAM161AQ3B820 660 aa16.44■□□□□ 0.22
GPN3-203ENST00000543199 CCDC184Q52MB2 194 aa16.44■□□□□ 0.22
GPN3-203ENST00000543199 ANGEL2Q5VTE6 544 aaKnown RBP16.44■□□□□ 0.22
GPN3-203ENST00000543199 AGBL3Q8NEM8 1001 aa16.44■□□□□ 0.22
GPN3-203ENST00000543199 CDC5LQ99459 802 aaKnown RBP16.44■□□□□ 0.22
GPN3-203ENST00000543199 STK31Q9BXU1 1019 aa16.44■□□□□ 0.22
GPN3-203ENST00000543199 GREM2Q9H772 168 aa16.44■□□□□ 0.22
GPN3-203ENST00000543199 CASP8AP2Q9UKL3 1982 aa16.44■□□□□ 0.22
GPN3-203ENST00000543199 ATP2B4P23634 1241 aa16.43■□□□□ 0.22
GPN3-203ENST00000543199 ZNF157P51786 506 aaPredicted RBP16.43■□□□□ 0.22
GPN3-203ENST00000543199 ZNF280AP59817 542 aaPredicted RBP16.43■□□□□ 0.22
GPN3-203ENST00000543199 NEXNQ0ZGT2 675 aa16.43■□□□□ 0.22
GPN3-203ENST00000543199 SCARF1Q14162 830 aa16.43■□□□□ 0.22
GPN3-203ENST00000543199 TTLL11Q8NHH1 800 aa16.43■□□□□ 0.22
GPN3-203ENST00000543199 CDCA5Q96FF9 252 aa16.43■□□□□ 0.22
GPN3-203ENST00000543199 MCOLN1Q9GZU1 580 aa16.43■□□□□ 0.22
GPN3-203ENST00000543199 USP17L3A6NCW0 530 aa16.41■□□□□ 0.22
GPN3-203ENST00000543199 USP17L4A6NCW7 530 aa16.41■□□□□ 0.22
GPN3-203ENST00000543199 USP17L8P0C7I0 530 aa16.41■□□□□ 0.22
GPN3-203ENST00000543199 TWISTNBQ3B726 338 aaPredicted RBP16.41■□□□□ 0.22
GPN3-203ENST00000543199 G2E3Q7L622 706 aa16.41■□□□□ 0.22
GPN3-203ENST00000543199 USP17L1Q7RTZ2 530 aa16.41■□□□□ 0.22
GPN3-203ENST00000543199 PODNQ7Z5L7 613 aa16.41■□□□□ 0.22
GPN3-203ENST00000543199 MYOZ2Q9NPC6 264 aa16.41■□□□□ 0.22
GPN3-203ENST00000543199 MINPP1Q9UNW1 487 aa16.41■□□□□ 0.22
GPN3-203ENST00000543199 SCAF8Q9UPN6 1271 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms