RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 SHTN1A0MZ66 631 aa22.45■■□□□ 1.18
PPP1CA-210ENST00000542876 PCCAP05165 728 aaPredicted RBP22.45■■□□□ 1.18
PPP1CA-210ENST00000542876 C8orf58Q8NAV2 365 aa22.45■■□□□ 1.18
PPP1CA-210ENST00000542876 HHIPL1Q96JK4 782 aa22.45■■□□□ 1.18
PPP1CA-210ENST00000542876 PDE8AO60658 829 aa22.44■■□□□ 1.18
PPP1CA-210ENST00000542876 TAF1P21675 1872 aa22.44■■□□□ 1.18
PPP1CA-210ENST00000542876 SEC31BQ9NQW1 1179 aa22.44■■□□□ 1.18
PPP1CA-210ENST00000542876 PODXL2Q9NZ53 605 aa22.44■■□□□ 1.18
PPP1CA-210ENST00000542876 UFL1O94874 794 aa22.43■■□□□ 1.18
PPP1CA-210ENST00000542876 TBC1D10BQ4KMP7 808 aaPredicted RBP22.43■■□□□ 1.18
PPP1CA-210ENST00000542876 SAMD7Q7Z3H4 446 aa22.43■■□□□ 1.18
PPP1CA-210ENST00000542876 USP48Q86UV5 1035 aa22.43■■□□□ 1.18
PPP1CA-210ENST00000542876 METTL22Q9BUU2 404 aaPredicted RBP22.43■■□□□ 1.18
PPP1CA-210ENST00000542876 GGA1Q9UJY5 639 aa22.43■■□□□ 1.18
PPP1CA-210ENST00000542876 TRPM7Q96QT4 1865 aa22.43■■□□□ 1.18
PPP1CA-210ENST00000542876 AOC2O75106 756 aa22.42■■□□□ 1.18
PPP1CA-210ENST00000542876 RBM26Q5T8P6 1007 aaKnown RBP22.42■■□□□ 1.18
PPP1CA-210ENST00000542876 KRT26Q7Z3Y9 468 aa22.41■■□□□ 1.18
PPP1CA-210ENST00000542876 DCPSQ96C86 337 aaKnown RBP22.41■■□□□ 1.18
PPP1CA-210ENST00000542876 CCDC85AQ96PX6 553 aaPredicted RBP22.41■■□□□ 1.18
PPP1CA-210ENST00000542876 STK31Q9BXU1 1019 aa22.41■■□□□ 1.18
PPP1CA-210ENST00000542876 KCNQ5Q9NR82 932 aa22.41■■□□□ 1.18
PPP1CA-210ENST00000542876 MAP3K2Q9Y2U5 619 aa22.41■■□□□ 1.18
PPP1CA-210ENST00000542876 ANKRD18AQ8IVF6 992 aa22.4■■□□□ 1.18
PPP1CA-210ENST00000542876 JARID2Q92833 1246 aaPredicted RBP22.4■■□□□ 1.18
PPP1CA-210ENST00000542876 RTL9Q8NET4 1388 aa22.39■■□□□ 1.18
PPP1CA-210ENST00000542876 CA12O43570 354 aa22.39■■□□□ 1.17
PPP1CA-210ENST00000542876 NEXNQ0ZGT2 675 aa22.39■■□□□ 1.17
PPP1CA-210ENST00000542876 THSD7BQ9C0I4 1608 aa22.39■■□□□ 1.17
PPP1CA-210ENST00000542876 XDHP47989 1333 aa22.38■■□□□ 1.17
PPP1CA-210ENST00000542876 VIL1P09327 827 aaKnown RBP22.38■■□□□ 1.17
PPP1CA-210ENST00000542876 HUNKP57058 714 aa22.38■■□□□ 1.17
PPP1CA-210ENST00000542876 KSR2Q6VAB6 950 aa22.38■■□□□ 1.17
PPP1CA-210ENST00000542876 PI4KAP2A4QPH2 592 aa22.37■■□□□ 1.17
PPP1CA-210ENST00000542876 BRPF1P55201 1214 aaPredicted RBP22.37■■□□□ 1.17
PPP1CA-210ENST00000542876 NOGQ13253 232 aa22.37■■□□□ 1.17
PPP1CA-210ENST00000542876 KIF4BQ2VIQ3 1234 aa22.37■■□□□ 1.17
PPP1CA-210ENST00000542876 TSPYL6Q8N831 410 aa22.37■■□□□ 1.17
PPP1CA-210ENST00000542876 PI4KAP1Q8N8J0 262 aa22.37■■□□□ 1.17
PPP1CA-210ENST00000542876 CDC5LQ99459 802 aaKnown RBP22.37■■□□□ 1.17
PPP1CA-210ENST00000542876 COL4A1P02462 1669 aa22.36■■□□□ 1.17
PPP1CA-210ENST00000542876 EGFRP00533 1210 aa22.36■■□□□ 1.17
PPP1CA-210ENST00000542876 SULF1Q8IWU6 871 aa22.36■■□□□ 1.17
PPP1CA-210ENST00000542876 C2orf69Q8N8R5 385 aa22.36■■□□□ 1.17
PPP1CA-210ENST00000542876 TSR2Q969E8 191 aaKnown RBP22.36■■□□□ 1.17
PPP1CA-210ENST00000542876 ABHD8Q96I13 439 aa22.36■■□□□ 1.17
PPP1CA-210ENST00000542876 TSKSQ9UJT2 592 aa22.36■■□□□ 1.17
PPP1CA-210ENST00000542876 ATP2B4P23634 1241 aa22.35■■□□□ 1.17
PPP1CA-210ENST00000542876 CTSWP56202 376 aa22.35■■□□□ 1.17
PPP1CA-210ENST00000542876 GBA2Q9HCG7 927 aaPredicted RBP22.35■■□□□ 1.17
PPP1CA-210ENST00000542876 CCDC27Q2M243 656 aa22.34■■□□□ 1.17
PPP1CA-210ENST00000542876 RSBN1LQ6PCB5 846 aaPredicted RBP22.34■■□□□ 1.17
PPP1CA-210ENST00000542876 DLK2Q6UY11 383 aa22.34■■□□□ 1.17
PPP1CA-210ENST00000542876 AGBL3Q8NEM8 1001 aa22.34■■□□□ 1.17
PPP1CA-210ENST00000542876 ADM5C9JUS6 153 aa22.33■■□□□ 1.17
PPP1CA-210ENST00000542876 IGKV5-2P06315 115 aa22.33■■□□□ 1.17
PPP1CA-210ENST00000542876 TWISTNBQ3B726 338 aaPredicted RBP22.33■■□□□ 1.17
PPP1CA-210ENST00000542876 GGA3Q9NZ52 723 aa22.33■■□□□ 1.17
PPP1CA-210ENST00000542876 RGMBQ6NW40 437 aa22.32■■□□□ 1.16
PPP1CA-210ENST00000542876 PODNQ7Z5L7 613 aa22.32■■□□□ 1.16
PPP1CA-210ENST00000542876 WWC1Q8IX03 1113 aa22.32■■□□□ 1.16
PPP1CA-210ENST00000542876 SLC4A2P04920 1241 aa22.31■■□□□ 1.16
PPP1CA-210ENST00000542876 TTLL11Q8NHH1 800 aa22.31■■□□□ 1.16
PPP1CA-210ENST00000542876 CCDC102AQ96A19 550 aa22.31■■□□□ 1.16
PPP1CA-210ENST00000542876 BSDC1Q9NW68 430 aaPredicted RBP22.31■■□□□ 1.16
PPP1CA-210ENST00000542876 USP17L3A6NCW0 530 aa22.3■■□□□ 1.16
PPP1CA-210ENST00000542876 USP17L4A6NCW7 530 aa22.3■■□□□ 1.16
PPP1CA-210ENST00000542876 NEURL1BA8MQ27 555 aa22.3■■□□□ 1.16
PPP1CA-210ENST00000542876 USP17L8P0C7I0 530 aa22.3■■□□□ 1.16
PPP1CA-210ENST00000542876 ZNF280AP59817 542 aaPredicted RBP22.3■■□□□ 1.16
PPP1CA-210ENST00000542876 CWF19L2Q2TBE0 894 aaKnown RBP22.3■■□□□ 1.16
PPP1CA-210ENST00000542876 USP17L1Q7RTZ2 530 aa22.3■■□□□ 1.16
PPP1CA-210ENST00000542876 GREM2Q9H772 168 aa22.3■■□□□ 1.16
PPP1CA-210ENST00000542876 ZNF157P51786 506 aaPredicted RBP22.29■■□□□ 1.16
PPP1CA-210ENST00000542876 SCARF1Q14162 830 aa22.29■■□□□ 1.16
PPP1CA-210ENST00000542876 CCDC184Q52MB2 194 aa22.29■■□□□ 1.16
PPP1CA-210ENST00000542876 MINPP1Q9UNW1 487 aa22.29■■□□□ 1.16
PPP1CA-210ENST00000542876 IL16Q14005 1332 aa22.29■■□□□ 1.16
PPP1CA-210ENST00000542876 IGHMBP2P38935 993 aaKnown RBP22.28■■□□□ 1.16
PPP1CA-210ENST00000542876 ANGEL2Q5VTE6 544 aaKnown RBP22.28■■□□□ 1.16
PPP1CA-210ENST00000542876 UBE3BQ7Z3V4 1068 aa22.28■■□□□ 1.16
PPP1CA-210ENST00000542876 MYOZ2Q9NPC6 264 aa22.28■■□□□ 1.16
PPP1CA-210ENST00000542876 ZNF609O15014 1411 aa22.28■■□□□ 1.16
PPP1CA-210ENST00000542876 MED23Q9ULK4 1368 aa22.27■■□□□ 1.16
PPP1CA-210ENST00000542876 CCDC85CA6NKD9 419 aa22.27■■□□□ 1.16
PPP1CA-210ENST00000542876 CDCA5Q96FF9 252 aa22.27■■□□□ 1.16
PPP1CA-210ENST00000542876 ZIC5Q96T25 663 aa22.27■■□□□ 1.16
PPP1CA-210ENST00000542876 ASTN2O75129 1339 aaPredicted RBP22.27■■□□□ 1.16
PPP1CA-210ENST00000542876 H7C1W4 665 aa22.26■■□□□ 1.15
PPP1CA-210ENST00000542876 CCT4P50991 539 aaKnown RBP22.26■■□□□ 1.15
PPP1CA-210ENST00000542876 FLIIQ13045 1269 aa22.26■■□□□ 1.15
PPP1CA-210ENST00000542876 NCBP3Q53F19 620 aaKnown RBP22.26■■□□□ 1.15
PPP1CA-210ENST00000542876 G2E3Q7L622 706 aa22.26■■□□□ 1.15
PPP1CA-210ENST00000542876 MYH16Q9H6N6 1097 aa22.26■■□□□ 1.15
PPP1CA-210ENST00000542876 FAM155AB1AL88 458 aaPredicted RBP22.25■■□□□ 1.15
PPP1CA-210ENST00000542876 FKBP5Q13451 457 aaPredicted RBP22.25■■□□□ 1.15
PPP1CA-210ENST00000542876 OGFOD1Q8N543 542 aa22.25■■□□□ 1.15
PPP1CA-210ENST00000542876 FBXW7Q969H0 707 aa22.25■■□□□ 1.15
PPP1CA-210ENST00000542876 GMLQ99445 158 aa22.25■■□□□ 1.15
PPP1CA-210ENST00000542876 KIF23Q02241 960 aaPredicted RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms