RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 USP42Q9H9J4 1324 aaKnown RBP11.41□□□□□ -0.58
LDHA-220ENST00000542179 UBR3Q6ZT12 1888 aa11.41□□□□□ -0.58
LDHA-220ENST00000542179 FAM205CA6NFA0 338 aa11.41□□□□□ -0.58
LDHA-220ENST00000542179 USPL1Q5W0Q7 1092 aa11.41□□□□□ -0.58
LDHA-220ENST00000542179 AMIGO3Q86WK7 504 aa11.41□□□□□ -0.58
LDHA-220ENST00000542179 RHPN1Q8TCX5 695 aa11.41□□□□□ -0.58
LDHA-220ENST00000542179 RYDENQ9NUL5 291 aaKnown RBP11.41□□□□□ -0.58
LDHA-220ENST00000542179 IRS4O14654 1257 aaPredicted RBP11.4□□□□□ -0.58
LDHA-220ENST00000542179 PDE8AO60658 829 aa11.4□□□□□ -0.58
LDHA-220ENST00000542179 NTSR2O95665 410 aa11.4□□□□□ -0.58
LDHA-220ENST00000542179 RFC4P35249 363 aa11.4□□□□□ -0.58
LDHA-220ENST00000542179 PTPN12Q05209 780 aaKnown RBP11.4□□□□□ -0.58
LDHA-220ENST00000542179 G3BP1Q13283 466 aaKnown RBP eCLIP11.4□□□□□ -0.586e-16■■■■□ 26.1
LDHA-220ENST00000542179 PLEKHM2Q8IWE5 1019 aa11.4□□□□□ -0.58
LDHA-220ENST00000542179 TMC2Q8TDI7 906 aa11.4□□□□□ -0.58
LDHA-220ENST00000542179 OSBPL3Q9H4L5 887 aa11.4□□□□□ -0.58
LDHA-220ENST00000542179 C4AP0C0L4 1744 aa11.4□□□□□ -0.58
LDHA-220ENST00000542179 SALL3Q9BXA9 1300 aa11.39□□□□□ -0.59
LDHA-220ENST00000542179 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.39□□□□□ -0.59
LDHA-220ENST00000542179 SMARCA5O60264 1052 aaPredicted RBP11.39□□□□□ -0.59
LDHA-220ENST00000542179 FAM161AQ3B820 660 aa11.39□□□□□ -0.59
LDHA-220ENST00000542179 BMP2KLQ5H9B9 411 aa11.39□□□□□ -0.59
LDHA-220ENST00000542179 RTL5Q5HYW3 569 aaPredicted RBP11.39□□□□□ -0.59
LDHA-220ENST00000542179 SLC10A5Q5PT55 438 aa11.39□□□□□ -0.59
LDHA-220ENST00000542179 C16orf71Q8IYS4 520 aaPredicted RBP11.39□□□□□ -0.59
LDHA-220ENST00000542179 TTLL11Q8NHH1 800 aa11.39□□□□□ -0.59
LDHA-220ENST00000542179 PA2G4Q9UQ80 394 aaKnown RBP11.39□□□□□ -0.59
LDHA-220ENST00000542179 COL24A1Q17RW2 1714 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 APBB1O00213 710 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 PPP1R37O75864 691 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 CIAO1O76071 339 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 SASH1O94885 1247 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 CTSWP56202 376 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 OS9Q13438 667 aaPredicted RBP11.38□□□□□ -0.59
LDHA-220ENST00000542179 TBC1D9BQ66K14 1250 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 SMIM5Q71RC9 77 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 SYNE4Q8N205 404 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 FLAD1Q8NFF5 587 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 HS3ST6Q96QI5 342 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 CAMKK2Q96RR4 588 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 SETDB2Q96T68 719 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 BACH2Q9BYV9 841 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 NYXQ9GZU5 481 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 TSHZ2Q9NRE2 1034 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 STAP2Q9UGK3 403 aa11.38□□□□□ -0.59
LDHA-220ENST00000542179 SRP68Q9UHB9 627 aaKnown RBP11.38□□□□□ -0.59
LDHA-220ENST00000542179 LAMB2P55268 1798 aa11.37□□□□□ -0.59
LDHA-220ENST00000542179 C2orf72A6NCS6 295 aa11.37□□□□□ -0.59
LDHA-220ENST00000542179 CCDC57Q2TAC2 916 aa11.37□□□□□ -0.59
LDHA-220ENST00000542179 CLASRPQ8N2M8 674 aaKnown RBP11.37□□□□□ -0.59
LDHA-220ENST00000542179 RTL9Q8NET4 1388 aa11.37□□□□□ -0.59
LDHA-220ENST00000542179 MYH3P11055 1940 aa11.37□□□□□ -0.59
LDHA-220ENST00000542179 AOX1Q06278 1338 aa11.36□□□□□ -0.59
LDHA-220ENST00000542179 DDX60Q8IY21 1712 aaKnown RBP11.36□□□□□ -0.59
LDHA-220ENST00000542179 EYA2O00167 538 aa11.36□□□□□ -0.59
LDHA-220ENST00000542179 KIF3CO14782 793 aa11.36□□□□□ -0.59
LDHA-220ENST00000542179 PHF14O94880 888 aa11.36□□□□□ -0.59
LDHA-220ENST00000542179 GYS1P13807 737 aa11.36□□□□□ -0.59
LDHA-220ENST00000542179 IL15P40933 162 aaPredicted RBP11.36□□□□□ -0.59
LDHA-220ENST00000542179 PDE1AP54750 535 aa11.36□□□□□ -0.59
LDHA-220ENST00000542179 IFIT5Q13325 482 aaKnown RBP11.36□□□□□ -0.59
LDHA-220ENST00000542179 C8orf34Q49A92 452 aa11.36□□□□□ -0.59
LDHA-220ENST00000542179 TPTE2Q6XPS3 522 aa11.36□□□□□ -0.59
LDHA-220ENST00000542179 KLHDC4Q8TBB5 520 aa11.36□□□□□ -0.59
LDHA-220ENST00000542179 OTUD7AQ8TE49 926 aaPredicted RBP11.36□□□□□ -0.59
LDHA-220ENST00000542179 IL1RAPL2Q9NP60 686 aa11.36□□□□□ -0.59
LDHA-220ENST00000542179 CHMP3Q9Y3E7 222 aa11.36□□□□□ -0.59
LDHA-220ENST00000542179 ANKRD18BA2A2Z9 1011 aa11.35□□□□□ -0.59
LDHA-220ENST00000542179 MX1P20591 662 aa11.35□□□□□ -0.59
LDHA-220ENST00000542179 TM4SF1P30408 202 aa11.35□□□□□ -0.59
LDHA-220ENST00000542179 SF3B3Q15393 1217 aaKnown RBP11.35□□□□□ -0.59
LDHA-220ENST00000542179 ZNF827Q17R98 1081 aa11.35□□□□□ -0.59
LDHA-220ENST00000542179 ERFEQ4G0M1 354 aa11.35□□□□□ -0.59
LDHA-220ENST00000542179 TTC22Q5TAA0 569 aa11.35□□□□□ -0.59
LDHA-220ENST00000542179 ATG9AQ7Z3C6 839 aa11.35□□□□□ -0.59
LDHA-220ENST00000542179 CCDC125Q86Z20 511 aa11.35□□□□□ -0.59
LDHA-220ENST00000542179 SIL1Q9H173 461 aa11.35□□□□□ -0.59
LDHA-220ENST00000542179 GREM2Q9H772 168 aa11.35□□□□□ -0.59
LDHA-220ENST00000542179 GPR108Q9NPR9 543 aa11.35□□□□□ -0.59
LDHA-220ENST00000542179 TFCP2L1Q9NZI6 479 aa11.35□□□□□ -0.59
LDHA-220ENST00000542179 TTC41PQ6P2S7 1318 aa11.35□□□□□ -0.59
LDHA-220ENST00000542179 CARMIL3Q8ND23 1372 aa11.34□□□□□ -0.59
LDHA-220ENST00000542179 HCLS1P14317 486 aaPredicted RBP11.34□□□□□ -0.59
LDHA-220ENST00000542179 ITGA6P23229 1130 aa11.34□□□□□ -0.59
LDHA-220ENST00000542179 SF3B2Q13435 895 aaKnown RBP11.34□□□□□ -0.59
LDHA-220ENST00000542179 NFIXQ14938 502 aa11.34□□□□□ -0.59
LDHA-220ENST00000542179 CCDC152Q4G0S7 254 aa11.34□□□□□ -0.59
LDHA-220ENST00000542179 BICDL1Q6ZP65 573 aa11.34□□□□□ -0.59
LDHA-220ENST00000542179 NBPF5PQ86XG9 351 aaPredicted RBP11.34□□□□□ -0.59
LDHA-220ENST00000542179 NUTM1Q86Y26 1132 aa11.34□□□□□ -0.59
LDHA-220ENST00000542179 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
LDHA-220ENST00000542179 FAM177BA6PVY3 158 aa11.33□□□□□ -0.6
LDHA-220ENST00000542179 GSPT1P15170 499 aaKnown RBP11.33□□□□□ -0.6
LDHA-220ENST00000542179 BAG6P46379 1132 aa11.33□□□□□ -0.6
LDHA-220ENST00000542179 EN1Q05925 392 aaPredicted RBP11.33□□□□□ -0.6
LDHA-220ENST00000542179 EZH2Q15910 746 aaKnown RBP11.33□□□□□ -0.6
LDHA-220ENST00000542179 COL23A1Q86Y22 540 aaPredicted RBP11.33□□□□□ -0.6
LDHA-220ENST00000542179 NLGN1Q8N2Q7 840 aa11.33□□□□□ -0.6
LDHA-220ENST00000542179 EAF2Q96CJ1 260 aaPredicted RBP11.33□□□□□ -0.6
LDHA-220ENST00000542179 ZNF594Q96JF6 807 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms