RNA–Protein interactions for RNA: ENST00000542064.1

AP000439.2-201, humanhuman

TSL 2 BASIC

Gene AP000439.2, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.2-201ENST00000542064 ITGA6P23229 1130 aa16.27■□□□□ 0.2
AP000439.2-201ENST00000542064 EPHX2P34913 555 aa16.27■□□□□ 0.2
AP000439.2-201ENST00000542064 GMPSP49915 693 aaPredicted RBP16.27■□□□□ 0.2
AP000439.2-201ENST00000542064 TXNRD3Q86VQ6 643 aa16.27■□□□□ 0.2
AP000439.2-201ENST00000542064 SMC1BQ8NDV3 1235 aa16.27■□□□□ 0.2
AP000439.2-201ENST00000542064 CSF1RP07333 972 aa16.26■□□□□ 0.19
AP000439.2-201ENST00000542064 EIF6P56537 245 aaKnown RBP16.26■□□□□ 0.19
AP000439.2-201ENST00000542064 FSTL1Q12841 308 aa16.26■□□□□ 0.19
AP000439.2-201ENST00000542064 MAP1SQ66K74 1059 aaPredicted RBP16.26■□□□□ 0.19
AP000439.2-201ENST00000542064 DLK2Q6UY11 383 aa16.26■□□□□ 0.19
AP000439.2-201ENST00000542064 ANKRD18AQ8IVF6 992 aa16.26■□□□□ 0.19
AP000439.2-201ENST00000542064 DNAJC5GQ8N7S2 189 aa16.26■□□□□ 0.19
AP000439.2-201ENST00000542064 HACL1Q9UJ83 578 aa16.26■□□□□ 0.19
AP000439.2-201ENST00000542064 ZNRF3Q9ULT6 936 aa16.26■□□□□ 0.19
AP000439.2-201ENST00000542064 MINPP1Q9UNW1 487 aa16.26■□□□□ 0.19
AP000439.2-201ENST00000542064 GRM8O00222 908 aa16.25■□□□□ 0.19
AP000439.2-201ENST00000542064 PSMD14O00487 310 aa16.25■□□□□ 0.19
AP000439.2-201ENST00000542064 ECE2O60344 883 aa16.25■□□□□ 0.19
AP000439.2-201ENST00000542064 TRPM4Q8TD43 1214 aa16.25■□□□□ 0.19
AP000439.2-201ENST00000542064 CHMP4AQ9BY43 222 aa16.25■□□□□ 0.19
AP000439.2-201ENST00000542064 PODXL2Q9NZ53 605 aa16.25■□□□□ 0.19
AP000439.2-201ENST00000542064 HIRAP54198 1017 aaPredicted RBP16.24■□□□□ 0.19
AP000439.2-201ENST00000542064 WASHC4Q2M389 1173 aa16.24■□□□□ 0.19
AP000439.2-201ENST00000542064 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
AP000439.2-201ENST00000542064 LMBR1LQ6UX01 489 aa16.24■□□□□ 0.19
AP000439.2-201ENST00000542064 TMC4Q7Z404 712 aa16.24■□□□□ 0.19
AP000439.2-201ENST00000542064 SUPT20HQ8NEM7 779 aa16.24■□□□□ 0.19
AP000439.2-201ENST00000542064 HELBQ8NG08 1087 aaPredicted RBP16.24■□□□□ 0.19
AP000439.2-201ENST00000542064 MXD3Q9BW11 206 aa16.24■□□□□ 0.19
AP000439.2-201ENST00000542064 SRCIN1Q9C0H9 1055 aa16.24■□□□□ 0.19
AP000439.2-201ENST00000542064 SMC4Q9NTJ3 1288 aa16.24■□□□□ 0.19
AP000439.2-201ENST00000542064 ANKIB1Q9P2G1 1089 aa16.24■□□□□ 0.19
AP000439.2-201ENST00000542064 PCNTO95613 3336 aa16.24■□□□□ 0.19
AP000439.2-201ENST00000542064 IRS2Q9Y4H2 1338 aa16.23■□□□□ 0.19
AP000439.2-201ENST00000542064 HNRNPUQ00839 825 aaKnown RBP eCLIP16.23■□□□□ 0.19
AP000439.2-201ENST00000542064 GRIPAP1Q4V328 841 aa16.23■□□□□ 0.19
AP000439.2-201ENST00000542064 CIAPIN1Q6FI81 312 aa16.23■□□□□ 0.19
AP000439.2-201ENST00000542064 ANKRD44Q8N8A2 993 aa16.23■□□□□ 0.19
AP000439.2-201ENST00000542064 GPRC5DQ9NZD1 345 aa16.23■□□□□ 0.19
AP000439.2-201ENST00000542064 GGA1Q9UJY5 639 aa16.23■□□□□ 0.19
AP000439.2-201ENST00000542064 CHMP3Q9Y3E7 222 aa16.23■□□□□ 0.19
AP000439.2-201ENST00000542064 POLR2AP24928 1970 aaKnown RBP16.23■□□□□ 0.19
AP000439.2-201ENST00000542064 ASTN2O75129 1339 aaPredicted RBP16.22■□□□□ 0.19
AP000439.2-201ENST00000542064 PASKQ96RG2 1323 aa16.22■□□□□ 0.19
AP000439.2-201ENST00000542064 TAF5LO75529 589 aa16.22■□□□□ 0.19
AP000439.2-201ENST00000542064 ITGBL1O95965 494 aaPredicted RBP16.22■□□□□ 0.19
AP000439.2-201ENST00000542064 PUS3Q9BZE2 481 aaKnown RBP16.22■□□□□ 0.19
AP000439.2-201ENST00000542064 BSDC1Q9NW68 430 aaPredicted RBP16.22■□□□□ 0.19
AP000439.2-201ENST00000542064 NOB1Q9ULX3 412 aaKnown RBP16.22■□□□□ 0.19
AP000439.2-201ENST00000542064 XDHP47989 1333 aa16.21■□□□□ 0.19
AP000439.2-201ENST00000542064 IQCA1LA6NCM1 817 aa16.21■□□□□ 0.19
AP000439.2-201ENST00000542064 TRAF5O00463 557 aa16.21■□□□□ 0.19
AP000439.2-201ENST00000542064 BCAR3O75815 825 aa16.21■□□□□ 0.19
AP000439.2-201ENST00000542064 ALDH1L1O75891 902 aa16.21■□□□□ 0.19
AP000439.2-201ENST00000542064 APLP1P51693 650 aa16.21■□□□□ 0.19
AP000439.2-201ENST00000542064 RARSP54136 660 aaKnown RBP16.21■□□□□ 0.19
AP000439.2-201ENST00000542064 CHRNDQ07001 517 aa16.21■□□□□ 0.19
AP000439.2-201ENST00000542064 LDHDQ86WU2 507 aa16.21■□□□□ 0.19
AP000439.2-201ENST00000542064 KLHDC4Q8TBB5 520 aa16.21■□□□□ 0.19
AP000439.2-201ENST00000542064 CDC5LQ99459 802 aaKnown RBP16.21■□□□□ 0.19
AP000439.2-201ENST00000542064 TMX4Q9H1E5 349 aaPredicted RBP16.21■□□□□ 0.19
AP000439.2-201ENST00000542064 BICC1Q9H694 974 aaKnown RBP16.21■□□□□ 0.19
AP000439.2-201ENST00000542064 UTYO14607 1347 aa16.2■□□□□ 0.18
AP000439.2-201ENST00000542064 CCT4P50991 539 aaKnown RBP16.2■□□□□ 0.18
AP000439.2-201ENST00000542064 SAMD7Q7Z3H4 446 aa16.2■□□□□ 0.18
AP000439.2-201ENST00000542064 USP44Q9H0E7 712 aa16.2■□□□□ 0.18
AP000439.2-201ENST00000542064 CLEC11AQ9Y240 323 aa16.2■□□□□ 0.18
AP000439.2-201ENST00000542064 TRPM7Q96QT4 1865 aa16.2■□□□□ 0.18
AP000439.2-201ENST00000542064 PTPRCP08575 1304 aa16.19■□□□□ 0.18
AP000439.2-201ENST00000542064 ALDH1L2Q3SY69 923 aa16.19■□□□□ 0.18
AP000439.2-201ENST00000542064 MICALL2Q8IY33 904 aa16.19■□□□□ 0.18
AP000439.2-201ENST00000542064 VPS33BQ9H267 617 aa16.19■□□□□ 0.18
AP000439.2-201ENST00000542064 C9orf78Q9NZ63 289 aaPredicted RBP16.19■□□□□ 0.18
AP000439.2-201ENST00000542064 MED23Q9ULK4 1368 aa16.18■□□□□ 0.18
AP000439.2-201ENST00000542064 SCAF8Q9UPN6 1271 aaKnown RBP16.18■□□□□ 0.18
AP000439.2-201ENST00000542064 ANKRD18BA2A2Z9 1011 aa16.17■□□□□ 0.18
AP000439.2-201ENST00000542064 HSP90B1P14625 803 aaKnown RBP16.17■□□□□ 0.18
AP000439.2-201ENST00000542064 ATP2B4P23634 1241 aa16.17■□□□□ 0.18
AP000439.2-201ENST00000542064 LMOD1P29536 600 aaPredicted RBP16.17■□□□□ 0.18
AP000439.2-201ENST00000542064 IGHMBP2P38935 993 aaKnown RBP16.17■□□□□ 0.18
AP000439.2-201ENST00000542064 TBC1D10BQ4KMP7 808 aaPredicted RBP16.17■□□□□ 0.18
AP000439.2-201ENST00000542064 EYA3Q99504 573 aa16.17■□□□□ 0.18
AP000439.2-201ENST00000542064 CNOT7Q9UIV1 285 aaKnown RBP16.17■□□□□ 0.18
AP000439.2-201ENST00000542064 IFIT5Q13325 482 aaKnown RBP16.16■□□□□ 0.18
AP000439.2-201ENST00000542064 LRRC24Q50LG9 513 aa16.16■□□□□ 0.18
AP000439.2-201ENST00000542064 CNTROBQ8N137 903 aa16.16■□□□□ 0.18
AP000439.2-201ENST00000542064 GLIS2Q9BZE0 524 aaPredicted RBP16.16■□□□□ 0.18
AP000439.2-201ENST00000542064 ZC3H12CQ9C0D7 883 aaKnown RBP16.16■□□□□ 0.18
AP000439.2-201ENST00000542064 JAG2Q9Y219 1238 aa16.16■□□□□ 0.18
AP000439.2-201ENST00000542064 ZNF804BA4D1E1 1349 aa16.16■□□□□ 0.18
AP000439.2-201ENST00000542064 PLIN1O60240 522 aa16.15■□□□□ 0.18
AP000439.2-201ENST00000542064 RABL6Q3YEC7 729 aaPredicted RBP16.15■□□□□ 0.18
AP000439.2-201ENST00000542064 RBM26Q5T8P6 1007 aaKnown RBP16.15■□□□□ 0.18
AP000439.2-201ENST00000542064 KLRG1Q96E93 195 aa16.15■□□□□ 0.18
AP000439.2-201ENST00000542064 GMLQ99445 158 aa16.15■□□□□ 0.18
AP000439.2-201ENST00000542064 MPHOSPH8Q99549 860 aa16.15■□□□□ 0.18
AP000439.2-201ENST00000542064 MEIS3Q99687 375 aa16.15■□□□□ 0.18
AP000439.2-201ENST00000542064 ADARB2Q9NS39 739 aaKnown RBP16.15■□□□□ 0.18
AP000439.2-201ENST00000542064 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
AP000439.2-201ENST00000542064 VIL1P09327 827 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms