RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 COL4A1P02462 1669 aa26.12■■□□□ 1.77
MSRB3-211ENST00000541897 GRIPAP1Q4V328 841 aa26.11■■□□□ 1.77
MSRB3-211ENST00000541897 CC2D2BQ6DHV5 1058 aa26.11■■□□□ 1.77
MSRB3-211ENST00000541897 SP8Q8IXZ3 490 aa26.11■■□□□ 1.77
MSRB3-211ENST00000541897 MPHOSPH8Q99549 860 aa26.11■■□□□ 1.77
MSRB3-211ENST00000541897 PCDHB15Q9Y5E8 787 aa26.11■■□□□ 1.77
MSRB3-211ENST00000541897 SOGA3Q5TF21 947 aa26.1■■□□□ 1.77
MSRB3-211ENST00000541897 ERICH6BQ5W0A0 696 aa26.1■■□□□ 1.77
MSRB3-211ENST00000541897 LDHAL6AQ6ZMR3 332 aa26.1■■□□□ 1.77
MSRB3-211ENST00000541897 SLX4Q8IY92 1834 aa26.09■■□□□ 1.77
MSRB3-211ENST00000541897 LRRC37AA6NMS7 1700 aa26.09■■□□□ 1.77
MSRB3-211ENST00000541897 CIAO1O76071 339 aa26.09■■□□□ 1.77
MSRB3-211ENST00000541897 TOMM70O94826 608 aa26.09■■□□□ 1.77
MSRB3-211ENST00000541897 ZNF594Q96JF6 807 aaPredicted RBP26.09■■□□□ 1.77
MSRB3-211ENST00000541897 NOP58Q9Y2X3 529 aaKnown RBP26.08■■□□□ 1.77
MSRB3-211ENST00000541897 TAF1P21675 1872 aa26.08■■□□□ 1.77
MSRB3-211ENST00000541897 EYA2O00167 538 aa26.07■■□□□ 1.76
MSRB3-211ENST00000541897 RASSF7Q02833 373 aa26.07■■□□□ 1.76
MSRB3-211ENST00000541897 TMX4Q9H1E5 349 aaPredicted RBP26.07■■□□□ 1.76
MSRB3-211ENST00000541897 RIPOR2Q9Y4F9 1068 aa26.07■■□□□ 1.76
MSRB3-211ENST00000541897 KLHDC4Q8TBB5 520 aa26.06■■□□□ 1.76
MSRB3-211ENST00000541897 CNNM1Q9NRU3 951 aa26.06■■□□□ 1.76
MSRB3-211ENST00000541897 HDAC1Q13547 482 aaPredicted RBP26.05■■□□□ 1.76
MSRB3-211ENST00000541897 MINPP1Q9UNW1 487 aa26.05■■□□□ 1.76
MSRB3-211ENST00000541897 PA2G4Q9UQ80 394 aaKnown RBP26.05■■□□□ 1.76
MSRB3-211ENST00000541897 MROH5Q6ZUA9 1318 aa26.05■■□□□ 1.76
MSRB3-211ENST00000541897 SNED1Q8TER0 1413 aa26.05■■□□□ 1.76
MSRB3-211ENST00000541897 CACNA1SQ13698 1873 aa26.04■■□□□ 1.76
MSRB3-211ENST00000541897 C21orf2O43822 256 aa26.04■■□□□ 1.76
MSRB3-211ENST00000541897 IL15P40933 162 aaPredicted RBP26.04■■□□□ 1.76
MSRB3-211ENST00000541897 CCDC93Q567U6 631 aa26.04■■□□□ 1.76
MSRB3-211ENST00000541897 HSP90AB4PQ58FF6 505 aa26.04■■□□□ 1.76
MSRB3-211ENST00000541897 ATG9AQ7Z3C6 839 aa26.04■■□□□ 1.76
MSRB3-211ENST00000541897 ANKRD2Q9GZV1 360 aa26.04■■□□□ 1.76
MSRB3-211ENST00000541897 PODXL2Q9NZ53 605 aa26.04■■□□□ 1.76
MSRB3-211ENST00000541897 PRELPP51888 382 aa26.03■■□□□ 1.76
MSRB3-211ENST00000541897 LRRC24Q50LG9 513 aa26.03■■□□□ 1.76
MSRB3-211ENST00000541897 RTKN2Q8IZC4 609 aa26.03■■□□□ 1.76
MSRB3-211ENST00000541897 PUS3Q9BZE2 481 aaKnown RBP26.03■■□□□ 1.76
MSRB3-211ENST00000541897 SURF6O75683 361 aaKnown RBP26.02■■□□□ 1.76
MSRB3-211ENST00000541897 G3BP1Q13283 466 aaKnown RBP eCLIP26.02■■□□□ 1.76
MSRB3-211ENST00000541897 RRAGCQ9HB90 399 aa26.02■■□□□ 1.76
MSRB3-211ENST00000541897 KDM2BQ8NHM5 1336 aa26.02■■□□□ 1.76
MSRB3-211ENST00000541897 SPEF2Q9C093 1822 aa26.02■■□□□ 1.76
MSRB3-211ENST00000541897 XDHP47989 1333 aa26.01■■□□□ 1.75
MSRB3-211ENST00000541897 CHRNDQ07001 517 aa26.01■■□□□ 1.75
MSRB3-211ENST00000541897 WDR90Q96KV7 1748 aa26.01■■□□□ 1.75
MSRB3-211ENST00000541897 RWDD1Q9H446 243 aaPredicted RBP26.01■■□□□ 1.75
MSRB3-211ENST00000541897 C16orf71Q8IYS4 520 aaPredicted RBP26■■□□□ 1.75
MSRB3-211ENST00000541897 RTFDC1Q9BY42 306 aaPredicted RBP26■■□□□ 1.75
MSRB3-211ENST00000541897 SIL1Q9H173 461 aa26■■□□□ 1.75
MSRB3-211ENST00000541897 DCTPP1Q9H773 170 aa26■■□□□ 1.75
MSRB3-211ENST00000541897 LTBP1Q14766 1721 aa26■■□□□ 1.75
MSRB3-211ENST00000541897 APLP1P51693 650 aa25.99■■□□□ 1.75
MSRB3-211ENST00000541897 ERC1Q8IUD2 1116 aa25.99■■□□□ 1.75
MSRB3-211ENST00000541897 MPNDQ8N594 471 aa25.99■■□□□ 1.75
MSRB3-211ENST00000541897 VGLL2Q8N8G2 317 aa25.99■■□□□ 1.75
MSRB3-211ENST00000541897 PSMD1Q99460 953 aa25.99■■□□□ 1.75
MSRB3-211ENST00000541897 LEMD3Q9Y2U8 911 aa25.99■■□□□ 1.75
MSRB3-211ENST00000541897 LTBP3Q9NS15 1303 aa25.98■■□□□ 1.75
MSRB3-211ENST00000541897 RAB11FIP3O75154 756 aa25.98■■□□□ 1.75
MSRB3-211ENST00000541897 PDE8BO95263 885 aa25.98■■□□□ 1.75
MSRB3-211ENST00000541897 LMNB1P20700 586 aa25.98■■□□□ 1.75
MSRB3-211ENST00000541897 GPSM2P81274 684 aa25.98■■□□□ 1.75
MSRB3-211ENST00000541897 METTL24Q5JXM2 366 aa25.98■■□□□ 1.75
MSRB3-211ENST00000541897 RBM46Q8TBY0 533 aaKnown RBP25.98■■□□□ 1.75
MSRB3-211ENST00000541897 ZNF219Q9P2Y4 722 aaPredicted RBP25.98■■□□□ 1.75
MSRB3-211ENST00000541897 ATP2B4P23634 1241 aa25.97■■□□□ 1.75
MSRB3-211ENST00000541897 OLFM4Q6UX06 510 aa25.97■■□□□ 1.75
MSRB3-211ENST00000541897 DPP8Q6V1X1 898 aaPredicted RBP25.97■■□□□ 1.75
MSRB3-211ENST00000541897 ANKIB1Q9P2G1 1089 aa25.97■■□□□ 1.75
MSRB3-211ENST00000541897 CEP126Q9P2H0 1117 aa25.97■■□□□ 1.75
MSRB3-211ENST00000541897 NSFL1CQ9UNZ2 370 aaKnown RBP25.97■■□□□ 1.75
MSRB3-211ENST00000541897 TIAM2Q8IVF5 1701 aa25.97■■□□□ 1.75
MSRB3-211ENST00000541897 SUPT20HQ8NEM7 779 aa25.96■■□□□ 1.75
MSRB3-211ENST00000541897 GCC1Q96CN9 775 aa25.96■■□□□ 1.75
MSRB3-211ENST00000541897 VPS33BQ9H267 617 aa25.96■■□□□ 1.75
MSRB3-211ENST00000541897 EXOC6BQ9Y2D4 811 aa25.96■■□□□ 1.75
MSRB3-211ENST00000541897 A0A1B0GUL6 1792 aa25.96■■□□□ 1.75
MSRB3-211ENST00000541897 NFKBIEO00221 500 aa25.95■■□□□ 1.74
MSRB3-211ENST00000541897 SASH1O94885 1247 aa25.95■■□□□ 1.74
MSRB3-211ENST00000541897 OS9Q13438 667 aaPredicted RBP25.95■■□□□ 1.74
MSRB3-211ENST00000541897 UBE4AQ14139 1066 aa25.95■■□□□ 1.74
MSRB3-211ENST00000541897 SLC51AQ86UW1 340 aa25.95■■□□□ 1.74
MSRB3-211ENST00000541897 GGA1Q9UJY5 639 aa25.95■■□□□ 1.74
MSRB3-211ENST00000541897 FER1L6Q2WGJ9 1857 aa25.95■■□□□ 1.74
MSRB3-211ENST00000541897 DUOX1Q9NRD9 1551 aa25.95■■□□□ 1.74
MSRB3-211ENST00000541897 FKBP4Q02790 459 aaKnown RBP eCLIP25.94■■□□□ 1.74
MSRB3-211ENST00000541897 TBC1D16Q8TBP0 767 aa25.94■■□□□ 1.74
MSRB3-211ENST00000541897 KIF1BPQ96EK5 621 aa25.94■■□□□ 1.74
MSRB3-211ENST00000541897 GPR108Q9NPR9 543 aa25.94■■□□□ 1.74
MSRB3-211ENST00000541897 DICER1Q9UPY3 1922 aaKnown RBP25.94■■□□□ 1.74
MSRB3-211ENST00000541897 DNAJC5GQ8N7S2 189 aa25.93■■□□□ 1.74
MSRB3-211ENST00000541897 AKAP2Q9Y2D5 859 aa25.93■■□□□ 1.74
MSRB3-211ENST00000541897 ZNF804BA4D1E1 1349 aa25.92■■□□□ 1.74
MSRB3-211ENST00000541897 TAF5LO75529 589 aa25.92■■□□□ 1.74
MSRB3-211ENST00000541897 IGHDP01880 384 aa25.92■■□□□ 1.74
MSRB3-211ENST00000541897 FGFR2P21802 821 aa25.92■■□□□ 1.74
MSRB3-211ENST00000541897 HTRA3P83110 453 aa25.92■■□□□ 1.74
MSRB3-211ENST00000541897 TFCP2Q12800 502 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms