RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 PCDHGA10Q9Y5H3 936 aa6□□□□□ -1.45
SNHG1-218ENST00000541615 FHOD1Q9Y613 1164 aa6□□□□□ -1.45
SNHG1-218ENST00000541615 SCAF11Q99590 1463 aaKnown RBP6□□□□□ -1.45
SNHG1-218ENST00000541615 BICRAQ9NZM4 1560 aa6□□□□□ -1.45
SNHG1-218ENST00000541615 MAP3K5Q99683 1374 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 A0A0G2JS52 829 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 BICDL2A1A5D9 508 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 MARCH6O60337 910 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 FESP07332 822 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 TUBBP07437 444 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 CCDC159P0C7I6 412 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 HNRNPH1P31943 449 aaKnown RBP5.99□□□□□ -1.45
SNHG1-218ENST00000541615 SH3BGRP55822 239 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-218ENST00000541615 HDLBPQ00341 1268 aaKnown RBP5.99□□□□□ -1.45
SNHG1-218ENST00000541615 CCDC15Q0P6D6 951 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 KIAA0753Q2KHM9 967 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 CCDC184Q52MB2 194 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 LRRC23Q53EV4 343 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-218ENST00000541615 CCDC92Q53HC0 331 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-218ENST00000541615 FOXD4L5Q5VV16 416 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-218ENST00000541615 CEP135Q66GS9 1140 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 TYW1BQ6NUM6 668 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-218ENST00000541615 CADPS2Q86UW7 1296 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 NFATC2IPQ8NCF5 419 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 ZFAND2BQ8WV99 257 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 FOXD4L4Q8WXT5 416 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-218ENST00000541615 RSRC1Q96IZ7 334 aaKnown RBP5.99□□□□□ -1.45
SNHG1-218ENST00000541615 FMNL2Q96PY5 1086 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 RUFY1Q96T51 708 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 RABEP2Q9H5N1 569 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 KCND1Q9NSA2 647 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 LCMT1Q9UIC8 334 aa5.99□□□□□ -1.45
SNHG1-218ENST00000541615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.98□□□□□ -1.457e-33■□□□□ 8.4
SNHG1-218ENST00000541615 LIN7AO14910 233 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-218ENST00000541615 POLR3GO15318 223 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-218ENST00000541615 KRT38O76015 456 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 FMNL1O95466 1100 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-218ENST00000541615 ECEL1O95672 775 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 ZFXP17010 805 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-218ENST00000541615 STIP1P31948 543 aaKnown RBP5.98□□□□□ -1.45
SNHG1-218ENST00000541615 SLC8A1P32418 973 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 DYNC1I2Q13409 638 aaKnown RBP5.98□□□□□ -1.45
SNHG1-218ENST00000541615 LAMB3Q13751 1172 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 PDE3AQ14432 1141 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 RRP12Q5JTH9 1297 aaKnown RBP5.98□□□□□ -1.45
SNHG1-218ENST00000541615 ANKRD45Q5TZF3 282 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 FBXO38Q6PIJ6 1188 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 LAPTM4BQ86VI4 370 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 IQCA1Q86XH1 822 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 CCDC65Q8IXS2 484 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 CEP112Q8N8E3 955 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 MAB21L3Q8N8X9 362 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 EZH1Q92800 747 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-218ENST00000541615 KCNB2Q92953 911 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 SMARCE1Q969G3 411 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 THOC1Q96FV9 657 aaKnown RBP5.98□□□□□ -1.45
SNHG1-218ENST00000541615 MRFAP1L1Q96HT8 127 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 UIMC1Q96RL1 719 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 NAP1L3Q99457 506 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-218ENST00000541615 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.98□□□□□ -1.45
SNHG1-218ENST00000541615 TRAIPQ9BWF2 469 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 RETREG1Q9H6L5 497 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 LMBRD1Q9NUN5 540 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 EXOC1Q9NV70 894 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 SPATA7Q9P0W8 599 aa5.98□□□□□ -1.45
SNHG1-218ENST00000541615 ATP1B4Q9UN42 357 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-218ENST00000541615 RPAP1Q9BWH6 1393 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-218ENST00000541615 KIF21BO75037 1637 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 UNCXA6NJT0 531 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 K7ELQ4 463 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-218ENST00000541615 KIF3BO15066 747 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 TIMM44O43615 452 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 ONECUT3O60422 494 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-218ENST00000541615 ADCY5O95622 1261 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 MSL3P1P0C860 447 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 KCNA2P16389 499 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 FERP16591 822 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 ZNF24P17028 368 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 PLA2G4AP47712 749 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 GCLCP48506 637 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-218ENST00000541615 LMAN1P49257 510 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 RAB27AP51159 221 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 ROR2Q01974 943 aaKnown RBP5.97□□□□□ -1.45
SNHG1-218ENST00000541615 SCRN1Q12765 414 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 CAMK2BQ13554 666 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 SMC1AQ14683 1233 aaKnown RBP5.97□□□□□ -1.45
SNHG1-218ENST00000541615 PLCB4Q15147 1175 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 ZFYVE27Q5T4F4 411 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 SYNE3Q6ZMZ3 975 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 LRRC49Q8IUZ0 686 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 AMOTL1Q8IY63 956 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 STK11IPQ8N1F8 1099 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 FNBP4Q8N3X1 1017 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-218ENST00000541615 PRPF38AQ8NAV1 312 aaKnown RBP5.97□□□□□ -1.45
SNHG1-218ENST00000541615 CCDC150Q8NCX0 1101 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 ANKK1Q8NFD2 765 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 ERMNQ8TAM6 284 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 FAM81BQ96LP2 452 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 ALS2CR12Q96Q35 445 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms