RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 WASHC4Q2M389 1173 aa21.32■■□□□ 1
CD9-209ENST00000540891 GPC2Q8N158 579 aa21.32■■□□□ 1
CD9-209ENST00000540891 ANKIB1Q9P2G1 1089 aa21.32■■□□□ 1
CD9-209ENST00000540891 ZNRF3Q9ULT6 936 aa21.32■■□□□ 1
CD9-209ENST00000540891 CHMP3Q9Y3E7 222 aa21.32■■□□□ 1
CD9-209ENST00000540891 XDHP47989 1333 aa21.31■■□□□ 1
CD9-209ENST00000540891 WTIPA6NIX2 430 aaPredicted RBP21.31■■□□□ 1
CD9-209ENST00000540891 UFL1O94874 794 aa21.31■■□□□ 1
CD9-209ENST00000540891 CCT4P50991 539 aaKnown RBP21.31■■□□□ 1
CD9-209ENST00000540891 IFIT5Q13325 482 aaKnown RBP21.31■■□□□ 1
CD9-209ENST00000540891 GGA1Q9UJY5 639 aa21.31■■□□□ 1
CD9-209ENST00000540891 TNNQ9UQP3 1299 aa21.31■■□□□ 1
CD9-209ENST00000540891 YDJCA8MPS7 323 aa21.3■■□□□ 1
CD9-209ENST00000540891 RIMBP2O15034 1052 aa21.3■■□□□ 1
CD9-209ENST00000540891 CXCL9Q07325 125 aa21.3■■□□□ 1
CD9-209ENST00000540891 RABL6Q3YEC7 729 aaPredicted RBP21.3■■□□□ 1
CD9-209ENST00000540891 ANKRD44Q8N8A2 993 aa21.3■■□□□ 1
CD9-209ENST00000540891 BICC1Q9H694 974 aaKnown RBP21.3■■□□□ 1
CD9-209ENST00000540891 TRIM27P14373 513 aa21.29■■□□□ 1
CD9-209ENST00000540891 C16orf71Q8IYS4 520 aaPredicted RBP21.29■■□□□ 1
CD9-209ENST00000540891 RBM46Q8TBY0 533 aaKnown RBP21.29■■□□□ 1
CD9-209ENST00000540891 EYA3Q99504 573 aa21.29■■□□□ 1
CD9-209ENST00000540891 GJA3Q9Y6H8 435 aa21.29■■□□□ 1
CD9-209ENST00000540891 ATP2B4P23634 1241 aa21.28■■□□□ 1
CD9-209ENST00000540891 ZNF594Q96JF6 807 aaPredicted RBP21.28■■□□□ 1
CD9-209ENST00000540891 MPHOSPH8Q99549 860 aa21.28■■□□□ 1
CD9-209ENST00000540891 DBNDD1Q9H9R9 158 aa21.28■■□□□ 1
CD9-209ENST00000540891 SCN4AP35499 1836 aa21.27■■□□□ 1
CD9-209ENST00000540891 SCNN1DP51172 638 aa21.27■■□□□ 1
CD9-209ENST00000540891 DOK7Q18PE1 504 aa21.27■■□□□ 1
CD9-209ENST00000540891 CCDC57Q2TAC2 916 aa21.27■■□□□ 1
CD9-209ENST00000540891 INTS3Q68E01 1043 aaKnown RBP21.27■■□□□ 1
CD9-209ENST00000540891 ATF7IPQ6VMQ6 1270 aa21.27■■□□□ 1
CD9-209ENST00000540891 FRAT1Q92837 279 aaPredicted RBP21.27■■□□□ 1
CD9-209ENST00000540891 ZC3H12CQ9C0D7 883 aaKnown RBP21.27■■□□□ 1
CD9-209ENST00000540891 TAF1DQ9H5J8 278 aaPredicted RBP21.27■■□□□ 1
CD9-209ENST00000540891 IQCA1LA6NCM1 817 aa21.26■□□□□ 0.99
CD9-209ENST00000540891 IPO8O15397 1037 aaKnown RBP21.26■□□□□ 0.99
CD9-209ENST00000540891 RAD17O75943 681 aa21.26■□□□□ 0.99
CD9-209ENST00000540891 CHRNDQ07001 517 aa21.26■□□□□ 0.99
CD9-209ENST00000540891 ECE2O60344 883 aa21.25■□□□□ 0.99
CD9-209ENST00000540891 POTEIP0CG38 1075 aa21.25■□□□□ 0.99
CD9-209ENST00000540891 POTEJP0CG39 1038 aa21.25■□□□□ 0.99
CD9-209ENST00000540891 CIAPIN1Q6FI81 312 aa21.25■□□□□ 0.99
CD9-209ENST00000540891 KCNQ5Q9NR82 932 aa21.25■□□□□ 0.99
CD9-209ENST00000540891 A0A1B0GUL6 1792 aa21.24■□□□□ 0.99
CD9-209ENST00000540891 MEIS3Q99687 375 aa21.24■□□□□ 0.99
CD9-209ENST00000540891 ANKRD2Q9GZV1 360 aa21.24■□□□□ 0.99
CD9-209ENST00000540891 HACL1Q9UJ83 578 aa21.24■□□□□ 0.99
CD9-209ENST00000540891 LEMD3Q9Y2U8 911 aa21.24■□□□□ 0.99
CD9-209ENST00000540891 MED23Q9ULK4 1368 aa21.23■□□□□ 0.99
CD9-209ENST00000540891 ZKSCAN2Q63HK3 967 aa21.23■□□□□ 0.99
CD9-209ENST00000540891 TXNRD3Q86VQ6 643 aa21.23■□□□□ 0.99
CD9-209ENST00000540891 CLUAP1Q96AJ1 413 aa21.23■□□□□ 0.99
CD9-209ENST00000540891 ZNF804BA4D1E1 1349 aa21.23■□□□□ 0.99
CD9-209ENST00000540891 SNAP23O00161 211 aa21.22■□□□□ 0.99
CD9-209ENST00000540891 UBTFL1P0CB47 393 aaPredicted RBP21.22■□□□□ 0.99
CD9-209ENST00000540891 KLRK1P26718 216 aa21.22■□□□□ 0.99
CD9-209ENST00000540891 EPHX2P34913 555 aa21.22■□□□□ 0.99
CD9-209ENST00000540891 FSTL1Q12841 308 aa21.22■□□□□ 0.99
CD9-209ENST00000540891 TAF7LQ5H9L4 462 aa21.22■□□□□ 0.99
CD9-209ENST00000540891 LDHAL6AQ6ZMR3 332 aa21.22■□□□□ 0.99
CD9-209ENST00000540891 HELBQ8NG08 1087 aaPredicted RBP21.22■□□□□ 0.99
CD9-209ENST00000540891 PUS3Q9BZE2 481 aaKnown RBP21.22■□□□□ 0.99
CD9-209ENST00000540891 IRS2Q9Y4H2 1338 aa21.22■□□□□ 0.99
CD9-209ENST00000540891 SCN9AQ15858 1988 aa21.21■□□□□ 0.99
CD9-209ENST00000540891 ADAMTSL1Q8N6G6 1762 aa21.21■□□□□ 0.99
CD9-209ENST00000540891 PSMD14O00487 310 aa21.21■□□□□ 0.99
CD9-209ENST00000540891 TAF5LO75529 589 aa21.21■□□□□ 0.99
CD9-209ENST00000540891 EPS15P42566 896 aa21.21■□□□□ 0.99
CD9-209ENST00000540891 GMPSP49915 693 aaPredicted RBP21.21■□□□□ 0.99
CD9-209ENST00000540891 TNIP1Q15025 636 aa21.21■□□□□ 0.99
CD9-209ENST00000540891 SMC1BQ8NDV3 1235 aa21.21■□□□□ 0.99
CD9-209ENST00000540891 HSPA6P17066 643 aa21.2■□□□□ 0.98
CD9-209ENST00000540891 RFX5P48382 616 aaPredicted RBP21.2■□□□□ 0.98
CD9-209ENST00000540891 CNNM1Q9NRU3 951 aa21.2■□□□□ 0.98
CD9-209ENST00000540891 GPRC5DQ9NZD1 345 aa21.2■□□□□ 0.98
CD9-209ENST00000540891 ZBTB12Q9Y330 459 aaPredicted RBP21.2■□□□□ 0.98
CD9-209ENST00000540891 LRRFIP2Q9Y608 721 aaKnown RBP21.2■□□□□ 0.98
CD9-209ENST00000540891 TMEM57Q8N5G2 664 aa21.19■□□□□ 0.98
CD9-209ENST00000540891 KLHDC4Q8TBB5 520 aa21.19■□□□□ 0.98
CD9-209ENST00000540891 RIPOR2Q9Y4F9 1068 aa21.19■□□□□ 0.98
CD9-209ENST00000540891 LMOD1P29536 600 aaPredicted RBP21.18■□□□□ 0.98
CD9-209ENST00000540891 LRRC24Q50LG9 513 aa21.18■□□□□ 0.98
CD9-209ENST00000540891 SHTN1A0MZ66 631 aa21.17■□□□□ 0.98
CD9-209ENST00000540891 G3V3G9 751 aa21.17■□□□□ 0.98
CD9-209ENST00000540891 VIL1P09327 827 aaKnown RBP21.17■□□□□ 0.98
CD9-209ENST00000540891 RLBP1P12271 317 aa21.17■□□□□ 0.98
CD9-209ENST00000540891 EAPPQ56P03 285 aaPredicted RBP21.17■□□□□ 0.98
CD9-209ENST00000540891 DCAF8Q5TAQ9 597 aa21.17■□□□□ 0.98
CD9-209ENST00000540891 CHADLQ6NUI6 762 aa21.17■□□□□ 0.98
CD9-209ENST00000540891 PODNQ7Z5L7 613 aa21.17■□□□□ 0.98
CD9-209ENST00000540891 LDHDQ86WU2 507 aa21.17■□□□□ 0.98
CD9-209ENST00000540891 PLIN1O60240 522 aa21.16■□□□□ 0.98
CD9-209ENST00000540891 KCNJ4P48050 445 aa21.16■□□□□ 0.98
CD9-209ENST00000540891 PTPN12Q05209 780 aaKnown RBP21.16■□□□□ 0.98
CD9-209ENST00000540891 C15orf52Q6ZUT6 534 aaKnown RBP21.16■□□□□ 0.98
CD9-209ENST00000540891 PNMA8AQ86V59 439 aaPredicted RBP21.16■□□□□ 0.98
CD9-209ENST00000540891 COA1Q9GZY4 146 aa21.16■□□□□ 0.98
CD9-209ENST00000540891 PSME4Q14997 1843 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms