RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 TPTE2Q6XPS3 522 aa29.84■■■□□ 2.37
TTC3-225ENST00000540756 AKAP2Q9Y2D5 859 aa29.84■■■□□ 2.37
TTC3-225ENST00000540756 RTL9Q8NET4 1388 aa29.83■■■□□ 2.37
TTC3-225ENST00000540756 SF3B3Q15393 1217 aaKnown RBP29.83■■■□□ 2.37
TTC3-225ENST00000540756 SNAP23O00161 211 aa29.83■■■□□ 2.37
TTC3-225ENST00000540756 ATP2B3Q16720 1220 aa29.83■■■□□ 2.37
TTC3-225ENST00000540756 MPHOSPH8Q99549 860 aa29.83■■■□□ 2.37
TTC3-225ENST00000540756 PDE8BO95263 885 aa29.82■■■□□ 2.36
TTC3-225ENST00000540756 HAUS7Q99871 368 aa29.82■■■□□ 2.36
TTC3-225ENST00000540756 TAF5LO75529 589 aa29.81■■■□□ 2.36
TTC3-225ENST00000540756 TFCP2L1Q9NZI6 479 aa29.81■■■□□ 2.36
TTC3-225ENST00000540756 AKT1S1Q96B36 256 aa29.81■■■□□ 2.36
TTC3-225ENST00000540756 ANO2Q9NQ90 1003 aa29.81■■■□□ 2.36
TTC3-225ENST00000540756 CHGBP05060 677 aa29.8■■■□□ 2.36
TTC3-225ENST00000540756 FSD1Q9BTV5 496 aa29.8■■■□□ 2.36
TTC3-225ENST00000540756 DIAPH3Q9NSV4 1193 aa29.8■■■□□ 2.36
TTC3-225ENST00000540756 CARMIL3Q8ND23 1372 aa29.8■■■□□ 2.36
TTC3-225ENST00000540756 SGSM2O43147 1006 aa29.79■■■□□ 2.36
TTC3-225ENST00000540756 IGHMBP2P38935 993 aaKnown RBP29.79■■■□□ 2.36
TTC3-225ENST00000540756 DDX46Q7L014 1031 aaKnown RBP29.79■■■□□ 2.36
TTC3-225ENST00000540756 FAM227BQ96M60 508 aa29.79■■■□□ 2.36
TTC3-225ENST00000540756 MROH5Q6ZUA9 1318 aa29.78■■■□□ 2.36
TTC3-225ENST00000540756 TNRC6CQ9HCJ0 1690 aaKnown RBP29.78■■■□□ 2.36
TTC3-225ENST00000540756 NLRP3Q96P20 1036 aa29.78■■■□□ 2.36
TTC3-225ENST00000540756 NPHP1O15259 732 aa29.78■■■□□ 2.36
TTC3-225ENST00000540756 GORABQ5T7V8 394 aa29.78■■■□□ 2.36
TTC3-225ENST00000540756 CELF1Q92879 486 aaKnown RBP29.78■■■□□ 2.36
TTC3-225ENST00000540756 EIF5BO60841 1220 aaKnown RBP29.77■■■□□ 2.36
TTC3-225ENST00000540756 IFIT1P09914 478 aaKnown RBP29.76■■■□□ 2.36
TTC3-225ENST00000540756 SCARF1Q14162 830 aa29.76■■■□□ 2.36
TTC3-225ENST00000540756 COL23A1Q86Y22 540 aaPredicted RBP29.76■■■□□ 2.36
TTC3-225ENST00000540756 GOLIM4O00461 696 aa29.76■■■□□ 2.35
TTC3-225ENST00000540756 TM4SF1P30408 202 aa29.76■■■□□ 2.35
TTC3-225ENST00000540756 NMIQ13287 307 aaPredicted RBP29.76■■■□□ 2.35
TTC3-225ENST00000540756 CDC5LQ99459 802 aaKnown RBP29.76■■■□□ 2.35
TTC3-225ENST00000540756 TBC1D2Q9BYX2 928 aa29.76■■■□□ 2.35
TTC3-225ENST00000540756 FGFR2P21802 821 aa29.75■■■□□ 2.35
TTC3-225ENST00000540756 SNRKQ9NRH2 765 aa29.75■■■□□ 2.35
TTC3-225ENST00000540756 CHRNDQ07001 517 aa29.74■■■□□ 2.35
TTC3-225ENST00000540756 CCDC158Q5M9N0 1113 aa29.74■■■□□ 2.35
TTC3-225ENST00000540756 TTC39AQ5SRH9 613 aa29.74■■■□□ 2.35
TTC3-225ENST00000540756 PRR5LQ6MZQ0 368 aa29.74■■■□□ 2.35
TTC3-225ENST00000540756 ANKRD18AQ8IVF6 992 aa29.74■■■□□ 2.35
TTC3-225ENST00000540756 CNBD1Q8NA66 436 aa29.74■■■□□ 2.35
TTC3-225ENST00000540756 ANTXR1Q9H6X2 564 aa29.74■■■□□ 2.35
TTC3-225ENST00000540756 A0A0D9SFI3 127 aa29.74■■■□□ 2.35
TTC3-225ENST00000540756 PUM3Q15397 648 aaKnown RBP29.74■■■□□ 2.35
TTC3-225ENST00000540756 PI16Q6UXB8 463 aa29.74■■■□□ 2.35
TTC3-225ENST00000540756 PAG1Q9NWQ8 432 aa29.74■■■□□ 2.35
TTC3-225ENST00000540756 WTIPA6NIX2 430 aaPredicted RBP29.73■■■□□ 2.35
TTC3-225ENST00000540756 EN1Q05925 392 aaPredicted RBP29.73■■■□□ 2.35
TTC3-225ENST00000540756 DDR1Q08345 913 aa29.73■■■□□ 2.35
TTC3-225ENST00000540756 EZH2Q15910 746 aaKnown RBP29.72■■■□□ 2.35
TTC3-225ENST00000540756 SLFNL1Q499Z3 407 aa29.72■■■□□ 2.35
TTC3-225ENST00000540756 SERPINB2P05120 415 aa29.72■■■□□ 2.35
TTC3-225ENST00000540756 FKBP4Q02790 459 aaKnown RBP eCLIP29.72■■■□□ 2.35
TTC3-225ENST00000540756 LSG1Q9H089 658 aaKnown RBP29.72■■■□□ 2.35
TTC3-225ENST00000540756 PALD1Q9ULE6 856 aa29.72■■■□□ 2.35
TTC3-225ENST00000540756 DAXXQ9UER7 740 aaPredicted RBP29.71■■■□□ 2.35
TTC3-225ENST00000540756 LPIN2Q92539 896 aa29.71■■■□□ 2.35
TTC3-225ENST00000540756 AKAP11Q9UKA4 1901 aa29.7■■■□□ 2.35
TTC3-225ENST00000540756 CD2BP2O95400 341 aaKnown RBP29.7■■■□□ 2.34
TTC3-225ENST00000540756 PHKA1P46020 1223 aa29.7■■■□□ 2.34
TTC3-225ENST00000540756 PTH1RQ03431 593 aa29.69■■■□□ 2.34
TTC3-225ENST00000540756 SLC51AQ86UW1 340 aa29.69■■■□□ 2.34
TTC3-225ENST00000540756 KBTBD3Q8NAB2 608 aa29.69■■■□□ 2.34
TTC3-225ENST00000540756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.69■■■□□ 2.34
TTC3-225ENST00000540756 RUFY2Q8WXA3 655 aa29.69■■■□□ 2.34
TTC3-225ENST00000540756 BSDC1Q9NW68 430 aaPredicted RBP29.69■■■□□ 2.34
TTC3-225ENST00000540756 MCAMP43121 646 aa29.69■■■□□ 2.34
TTC3-225ENST00000540756 A0A1B0GUL6 1792 aa29.68■■■□□ 2.34
TTC3-225ENST00000540756 POLRMTO00411 1230 aaKnown RBP29.68■■■□□ 2.34
TTC3-225ENST00000540756 ZAP70P43403 619 aa29.68■■■□□ 2.34
TTC3-225ENST00000540756 BECN1Q14457 450 aa29.68■■■□□ 2.34
TTC3-225ENST00000540756 CCDC102BQ68D86 513 aa29.68■■■□□ 2.34
TTC3-225ENST00000540756 CAMKK2Q96RR4 588 aa29.68■■■□□ 2.34
TTC3-225ENST00000540756 MINPP1Q9UNW1 487 aa29.68■■■□□ 2.34
TTC3-225ENST00000540756 HIP1O00291 1037 aa29.67■■■□□ 2.34
TTC3-225ENST00000540756 RPS8P62241 208 aaKnown RBP29.67■■■□□ 2.34
TTC3-225ENST00000540756 ANO8Q9HCE9 1232 aaPredicted RBP29.67■■■□□ 2.34
TTC3-225ENST00000540756 RGPD3A6NKT7 1758 aaPredicted RBP29.67■■■□□ 2.34
TTC3-225ENST00000540756 RGPD4Q7Z3J3 1758 aa29.67■■■□□ 2.34
TTC3-225ENST00000540756 ARAP2Q8WZ64 1704 aa29.67■■■□□ 2.34
TTC3-225ENST00000540756 PNPLA7Q6ZV29 1317 aa29.67■■■□□ 2.34
TTC3-225ENST00000540756 ZNF589Q86UQ0 364 aaPredicted RBP29.67■■■□□ 2.34
TTC3-225ENST00000540756 SEC62Q99442 399 aaKnown RBP29.67■■■□□ 2.34
TTC3-225ENST00000540756 RAD50Q92878 1312 aa29.66■■■□□ 2.34
TTC3-225ENST00000540756 SLC5A1P13866 664 aa29.66■■■□□ 2.34
TTC3-225ENST00000540756 HMGB2P26583 209 aaKnown RBP29.65■■■□□ 2.34
TTC3-225ENST00000540756 KIAA1211Q6ZU35 1233 aa29.64■■■□□ 2.34
TTC3-225ENST00000540756 HSPA4P34932 840 aa29.63■■■□□ 2.33
TTC3-225ENST00000540756 CCDC129Q6ZRS4 1044 aa29.63■■■□□ 2.33
TTC3-225ENST00000540756 MED23Q9ULK4 1368 aa29.63■■■□□ 2.33
TTC3-225ENST00000540756 BCAMP50895 628 aa29.62■■■□□ 2.33
TTC3-225ENST00000540756 MYO5AQ9Y4I1 1855 aaKnown RBP29.62■■■□□ 2.33
TTC3-225ENST00000540756 MSL1Q68DK7 614 aa29.62■■■□□ 2.33
TTC3-225ENST00000540756 ARID4AP29374 1257 aaPredicted RBP29.61■■■□□ 2.33
TTC3-225ENST00000540756 ST5P78524 1137 aa29.61■■■□□ 2.33
TTC3-225ENST00000540756 DEFB132Q7Z7B7 95 aa29.61■■■□□ 2.33
TTC3-225ENST00000540756 SPRYD3Q8NCJ5 442 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms