RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 GPATCH3Q96I76 525 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 CCDC85AQ96PX6 553 aaPredicted RBP17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 GPBP1L1Q9HC44 474 aaPredicted RBP17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 BCS1LQ9Y276 419 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 CARMIL3Q8ND23 1372 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 ERC2O15083 957 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 CDC45O75419 566 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 SDSP20132 328 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 TM4SF1P30408 202 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 ERFEQ4G0M1 354 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 CCDC152Q4G0S7 254 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 LRRC24Q50LG9 513 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 TNNI3KQ59H18 835 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 FPGT-TNNI3KV9GXZ4 949 aa17.44■□□□□ 0.38
CYB561A3-216ENST00000540755 SPEF2Q9C093 1822 aa17.43■□□□□ 0.38
CYB561A3-216ENST00000540755 TSHZ3Q63HK5 1081 aa17.43■□□□□ 0.38
CYB561A3-216ENST00000540755 TPTE2Q6XPS3 522 aa17.43■□□□□ 0.38
CYB561A3-216ENST00000540755 NBPF5PQ86XG9 351 aaPredicted RBP17.43■□□□□ 0.38
CYB561A3-216ENST00000540755 ECHDC1Q9NTX5 307 aa17.43■□□□□ 0.38
CYB561A3-216ENST00000540755 GLRX3O76003 335 aaKnown RBP17.42■□□□□ 0.38
CYB561A3-216ENST00000540755 GTF2E1P29083 439 aaPredicted RBP17.42■□□□□ 0.38
CYB561A3-216ENST00000540755 NFIXQ14938 502 aa17.42■□□□□ 0.38
CYB561A3-216ENST00000540755 SF3B3Q15393 1217 aaKnown RBP17.42■□□□□ 0.38
CYB561A3-216ENST00000540755 PUS3Q9BZE2 481 aaKnown RBP17.42■□□□□ 0.38
CYB561A3-216ENST00000540755 ABCC12Q96J65 1359 aa17.42■□□□□ 0.38
CYB561A3-216ENST00000540755 ZNF609O15014 1411 aa17.42■□□□□ 0.38
CYB561A3-216ENST00000540755 RIC1Q4ADV7 1423 aa17.41■□□□□ 0.38
CYB561A3-216ENST00000540755 CCDC8Q9H0W5 538 aaPredicted RBP17.41■□□□□ 0.38
CYB561A3-216ENST00000540755 DLEC1Q9Y238 1755 aa17.4■□□□□ 0.38
CYB561A3-216ENST00000540755 EIF5BO60841 1220 aaKnown RBP17.4■□□□□ 0.38
CYB561A3-216ENST00000540755 SEC24BO95487 1268 aa17.4■□□□□ 0.38
CYB561A3-216ENST00000540755 CHRNA5P30532 468 aa17.4■□□□□ 0.38
CYB561A3-216ENST00000540755 LDHAL6AQ6ZMR3 332 aa17.4■□□□□ 0.38
CYB561A3-216ENST00000540755 TBC1D9Q6ZT07 1266 aa17.4■□□□□ 0.38
CYB561A3-216ENST00000540755 CEP126Q9P2H0 1117 aa17.4■□□□□ 0.38
CYB561A3-216ENST00000540755 RIPOR2Q9Y4F9 1068 aa17.4■□□□□ 0.38
CYB561A3-216ENST00000540755 TNRC6CQ9HCJ0 1690 aaKnown RBP17.4■□□□□ 0.38
CYB561A3-216ENST00000540755 KIF3CO14782 793 aa17.39■□□□□ 0.37
CYB561A3-216ENST00000540755 TLR7Q9NYK1 1049 aaKnown RBP17.39■□□□□ 0.37
CYB561A3-216ENST00000540755 DBNLQ9UJU6 430 aaKnown RBP17.39■□□□□ 0.37
CYB561A3-216ENST00000540755 AKAP2Q9Y2D5 859 aa17.39■□□□□ 0.37
CYB561A3-216ENST00000540755 A0A1B0GUL6 1792 aa17.39■□□□□ 0.37
CYB561A3-216ENST00000540755 ARAP2Q8WZ64 1704 aa17.38■□□□□ 0.37
CYB561A3-216ENST00000540755 NLRP3Q96P20 1036 aa17.38■□□□□ 0.37
CYB561A3-216ENST00000540755 UPF2Q9HAU5 1272 aaKnown RBP17.38■□□□□ 0.37
CYB561A3-216ENST00000540755 CNNM1Q9NRU3 951 aa17.38■□□□□ 0.37
CYB561A3-216ENST00000540755 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 CASC1Q6TDU7 716 aa17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 ARHGAP27Q6ZUM4 889 aa17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 CDC5LQ99459 802 aaKnown RBP17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 SEC31BQ9NQW1 1179 aa17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 PIM2Q9P1W9 311 aa17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 MROH5Q6ZUA9 1318 aa17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 IGHMBP2P38935 993 aaKnown RBP17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 METTL24Q5JXM2 366 aa17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 C3orf67Q6ZVT6 689 aa17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 CNTROBQ8N137 903 aa17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 VGLL2Q8N8G2 317 aa17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 CNBD1Q8NA66 436 aa17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 MPHOSPH8Q99549 860 aa17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 DBNDD2Q9BQY9 259 aa17.37■□□□□ 0.37
CYB561A3-216ENST00000540755 TAF1P21675 1872 aa17.36■□□□□ 0.37
CYB561A3-216ENST00000540755 A0A1B0GUL7 405 aa17.36■□□□□ 0.37
CYB561A3-216ENST00000540755 ATP5JP18859 108 aa17.36■□□□□ 0.37
CYB561A3-216ENST00000540755 DALRD3Q5D0E6 543 aaKnown RBP17.36■□□□□ 0.37
CYB561A3-216ENST00000540755 RILPL2Q969X0 211 aa17.36■□□□□ 0.37
CYB561A3-216ENST00000540755 ANKRD31Q8N7Z5 1873 aa17.35■□□□□ 0.37
CYB561A3-216ENST00000540755 COL4A1P02462 1669 aa17.35■□□□□ 0.37
CYB561A3-216ENST00000540755 NPHP1O15259 732 aa17.35■□□□□ 0.37
CYB561A3-216ENST00000540755 PRR5LQ6MZQ0 368 aa17.35■□□□□ 0.37
CYB561A3-216ENST00000540755 PDE8BO95263 885 aa17.34■□□□□ 0.37
CYB561A3-216ENST00000540755 SERPINB2P05120 415 aa17.34■□□□□ 0.37
CYB561A3-216ENST00000540755 ANP32AP39687 249 aaKnown RBP17.34■□□□□ 0.37
CYB561A3-216ENST00000540755 MFAP1P55081 439 aaKnown RBP17.34■□□□□ 0.37
CYB561A3-216ENST00000540755 TIMM10P62072 90 aa17.34■□□□□ 0.37
CYB561A3-216ENST00000540755 NEUROD6Q96NK8 337 aa17.34■□□□□ 0.37
CYB561A3-216ENST00000540755 SBF1O95248 1867 aa17.33■□□□□ 0.37
CYB561A3-216ENST00000540755 COL11A2P13942 1736 aaPredicted RBP17.33■□□□□ 0.37
CYB561A3-216ENST00000540755 ST5P78524 1137 aa17.33■□□□□ 0.37
CYB561A3-216ENST00000540755 C9orf131Q5VYM1 1079 aa17.33■□□□□ 0.37
CYB561A3-216ENST00000540755 ANKRD18AQ8IVF6 992 aa17.33■□□□□ 0.37
CYB561A3-216ENST00000540755 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.33■□□□□ 0.37
CYB561A3-216ENST00000540755 EVI5LQ96CN4 794 aa17.33■□□□□ 0.37
CYB561A3-216ENST00000540755 CHMLP26374 656 aa17.32■□□□□ 0.36
CYB561A3-216ENST00000540755 ATP2B3Q16720 1220 aa17.32■□□□□ 0.36
CYB561A3-216ENST00000540755 TBC1D32Q96NH3 1257 aa17.32■□□□□ 0.36
CYB561A3-216ENST00000540755 BOLA2Q9H3K6 86 aa17.32■□□□□ 0.36
CYB561A3-216ENST00000540755 MAP4K4O95819 1239 aaPredicted RBP17.31■□□□□ 0.36
CYB561A3-216ENST00000540755 HSPA6P17066 643 aa17.31■□□□□ 0.36
CYB561A3-216ENST00000540755 XAGE2Q96GT9 111 aa17.31■□□□□ 0.36
CYB561A3-216ENST00000540755 NMRK2Q9NPI5 230 aa17.31■□□□□ 0.36
CYB561A3-216ENST00000540755 BSDC1Q9NW68 430 aaPredicted RBP17.31■□□□□ 0.36
CYB561A3-216ENST00000540755 FGFR2P21802 821 aa17.31■□□□□ 0.36
CYB561A3-216ENST00000540755 PUM3Q15397 648 aaKnown RBP17.31■□□□□ 0.36
CYB561A3-216ENST00000540755 CCDC24Q8N4L8 307 aa17.31■□□□□ 0.36
CYB561A3-216ENST00000540755 HAUS7Q99871 368 aa17.31■□□□□ 0.36
CYB561A3-216ENST00000540755 RFX7Q2KHR2 1363 aa17.3■□□□□ 0.36
CYB561A3-216ENST00000540755 CCDC158Q5M9N0 1113 aa17.3■□□□□ 0.36
CYB561A3-216ENST00000540755 DDX46Q7L014 1031 aaKnown RBP17.3■□□□□ 0.36
CYB561A3-216ENST00000540755 LPIN2Q92539 896 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms