RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 MYD88Q99836 296 aa15.52■□□□□ 0.08
CBX3P4-202ENST00000540428 ZC3H12CQ9C0D7 883 aaKnown RBP15.52■□□□□ 0.08
CBX3P4-202ENST00000540428 ZNF408Q9H9D4 720 aa15.52■□□□□ 0.08
CBX3P4-202ENST00000540428 RTL9Q8NET4 1388 aa15.51■□□□□ 0.07
CBX3P4-202ENST00000540428 TAF1P21675 1872 aa15.51■□□□□ 0.07
CBX3P4-202ENST00000540428 PDE8AO60658 829 aa15.51■□□□□ 0.07
CBX3P4-202ENST00000540428 DDX58O95786 925 aaKnown RBP15.51■□□□□ 0.07
CBX3P4-202ENST00000540428 USP48Q86UV5 1035 aa15.51■□□□□ 0.07
CBX3P4-202ENST00000540428 CWC25Q9NXE8 425 aaPredicted RBP15.51■□□□□ 0.07
CBX3P4-202ENST00000540428 ELL2O00472 640 aaPredicted RBP15.5■□□□□ 0.07
CBX3P4-202ENST00000540428 VIL1P09327 827 aaKnown RBP15.5■□□□□ 0.07
CBX3P4-202ENST00000540428 NOGQ13253 232 aa15.5■□□□□ 0.07
CBX3P4-202ENST00000540428 DOK7Q18PE1 504 aa15.5■□□□□ 0.07
CBX3P4-202ENST00000540428 TBC1D10BQ4KMP7 808 aaPredicted RBP15.5■□□□□ 0.07
CBX3P4-202ENST00000540428 CCDC30Q5VVM6 783 aa15.5■□□□□ 0.07
CBX3P4-202ENST00000540428 KRT26Q7Z3Y9 468 aa15.5■□□□□ 0.07
CBX3P4-202ENST00000540428 DCPSQ96C86 337 aaKnown RBP15.5■□□□□ 0.07
CBX3P4-202ENST00000540428 METTL22Q9BUU2 404 aaPredicted RBP15.5■□□□□ 0.07
CBX3P4-202ENST00000540428 SEC31BQ9NQW1 1179 aa15.5■□□□□ 0.07
CBX3P4-202ENST00000540428 GGA1Q9UJY5 639 aa15.5■□□□□ 0.07
CBX3P4-202ENST00000540428 COL4A1P02462 1669 aa15.5■□□□□ 0.07
CBX3P4-202ENST00000540428 ZNF609O15014 1411 aa15.5■□□□□ 0.07
CBX3P4-202ENST00000540428 UFL1O94874 794 aa15.49■□□□□ 0.07
CBX3P4-202ENST00000540428 EGFRP00533 1210 aa15.49■□□□□ 0.07
CBX3P4-202ENST00000540428 HUNKP57058 714 aa15.49■□□□□ 0.07
CBX3P4-202ENST00000540428 C8orf58Q8NAV2 365 aa15.49■□□□□ 0.07
CBX3P4-202ENST00000540428 KCNQ5Q9NR82 932 aa15.49■□□□□ 0.07
CBX3P4-202ENST00000540428 ANKIB1Q9P2G1 1089 aa15.49■□□□□ 0.07
CBX3P4-202ENST00000540428 G3V3G9 751 aa15.48■□□□□ 0.07
CBX3P4-202ENST00000540428 KIF4BQ2VIQ3 1234 aa15.48■□□□□ 0.07
CBX3P4-202ENST00000540428 DCAF8Q5TAQ9 597 aa15.48■□□□□ 0.07
CBX3P4-202ENST00000540428 AGBL3Q8NEM8 1001 aa15.48■□□□□ 0.07
CBX3P4-202ENST00000540428 GBA2Q9HCG7 927 aaPredicted RBP15.48■□□□□ 0.07
CBX3P4-202ENST00000540428 XDHP47989 1333 aa15.47■□□□□ 0.07
CBX3P4-202ENST00000540428 ANKRD18AQ8IVF6 992 aa15.47■□□□□ 0.07
CBX3P4-202ENST00000540428 C2orf69Q8N8R5 385 aa15.47■□□□□ 0.07
CBX3P4-202ENST00000540428 ATP2B4P23634 1241 aa15.46■□□□□ 0.07
CBX3P4-202ENST00000540428 ZNF280AP59817 542 aaPredicted RBP15.46■□□□□ 0.07
CBX3P4-202ENST00000540428 RBM26Q5T8P6 1007 aaKnown RBP15.46■□□□□ 0.07
CBX3P4-202ENST00000540428 RGMBQ6NW40 437 aa15.46■□□□□ 0.07
CBX3P4-202ENST00000540428 RSBN1LQ6PCB5 846 aaPredicted RBP15.46■□□□□ 0.07
CBX3P4-202ENST00000540428 KSR2Q6VAB6 950 aa15.46■□□□□ 0.07
CBX3P4-202ENST00000540428 SULF1Q8IWU6 871 aa15.46■□□□□ 0.07
CBX3P4-202ENST00000540428 CCDC102AQ96A19 550 aa15.46■□□□□ 0.07
CBX3P4-202ENST00000540428 CDC5LQ99459 802 aaKnown RBP15.46■□□□□ 0.07
CBX3P4-202ENST00000540428 TSKSQ9UJT2 592 aa15.46■□□□□ 0.07
CBX3P4-202ENST00000540428 MAP3K2Q9Y2U5 619 aa15.46■□□□□ 0.07
CBX3P4-202ENST00000540428 ADM5C9JUS6 153 aa15.45■□□□□ 0.06
CBX3P4-202ENST00000540428 CTSWP56202 376 aa15.45■□□□□ 0.06
CBX3P4-202ENST00000540428 CCDC27Q2M243 656 aa15.45■□□□□ 0.06
CBX3P4-202ENST00000540428 DLK2Q6UY11 383 aa15.45■□□□□ 0.06
CBX3P4-202ENST00000540428 PODNQ7Z5L7 613 aa15.45■□□□□ 0.06
CBX3P4-202ENST00000540428 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
CBX3P4-202ENST00000540428 GGA3Q9NZ52 723 aa15.45■□□□□ 0.06
CBX3P4-202ENST00000540428 PI4KAP2A4QPH2 592 aa15.44■□□□□ 0.06
CBX3P4-202ENST00000540428 FAM155AB1AL88 458 aaPredicted RBP15.44■□□□□ 0.06
CBX3P4-202ENST00000540428 IGKV5-2P06315 115 aa15.44■□□□□ 0.06
CBX3P4-202ENST00000540428 NEXNQ0ZGT2 675 aa15.44■□□□□ 0.06
CBX3P4-202ENST00000540428 PI4KAP1Q8N8J0 262 aa15.44■□□□□ 0.06
CBX3P4-202ENST00000540428 CCDC85AQ96PX6 553 aaPredicted RBP15.44■□□□□ 0.06
CBX3P4-202ENST00000540428 STK31Q9BXU1 1019 aa15.44■□□□□ 0.06
CBX3P4-202ENST00000540428 TTLL11Q8NHH1 800 aa15.43■□□□□ 0.06
CBX3P4-202ENST00000540428 JARID2Q92833 1246 aaPredicted RBP15.43■□□□□ 0.06
CBX3P4-202ENST00000540428 ZIC5Q96T25 663 aa15.43■□□□□ 0.06
CBX3P4-202ENST00000540428 GMLQ99445 158 aa15.43■□□□□ 0.06
CBX3P4-202ENST00000540428 BSDC1Q9NW68 430 aaPredicted RBP15.43■□□□□ 0.06
CBX3P4-202ENST00000540428 SAGE1Q9NXZ1 904 aa15.43■□□□□ 0.06
CBX3P4-202ENST00000540428 PITPNM2Q9BZ72 1349 aa15.43■□□□□ 0.06
CBX3P4-202ENST00000540428 MED23Q9ULK4 1368 aa15.42■□□□□ 0.06
CBX3P4-202ENST00000540428 USP17L3A6NCW0 530 aa15.42■□□□□ 0.06
CBX3P4-202ENST00000540428 USP17L4A6NCW7 530 aa15.42■□□□□ 0.06
CBX3P4-202ENST00000540428 USP17L8P0C7I0 530 aa15.42■□□□□ 0.06
CBX3P4-202ENST00000540428 RGS19P49795 217 aa15.42■□□□□ 0.06
CBX3P4-202ENST00000540428 ZNF157P51786 506 aaPredicted RBP15.42■□□□□ 0.06
CBX3P4-202ENST00000540428 NCBP3Q53F19 620 aaKnown RBP15.42■□□□□ 0.06
CBX3P4-202ENST00000540428 USP17L1Q7RTZ2 530 aa15.42■□□□□ 0.06
CBX3P4-202ENST00000540428 CDCA5Q96FF9 252 aa15.42■□□□□ 0.06
CBX3P4-202ENST00000540428 SCN9AQ15858 1988 aa15.42■□□□□ 0.06
CBX3P4-202ENST00000540428 CCDC85CA6NKD9 419 aa15.41■□□□□ 0.06
CBX3P4-202ENST00000540428 NEURL1BA8MQ27 555 aa15.41■□□□□ 0.06
CBX3P4-202ENST00000540428 SLC10A3P09131 477 aa15.41■□□□□ 0.06
CBX3P4-202ENST00000540428 FKBP1BP68106 108 aa15.41■□□□□ 0.06
CBX3P4-202ENST00000540428 SCARF1Q14162 830 aa15.41■□□□□ 0.06
CBX3P4-202ENST00000540428 ANGEL2Q5VTE6 544 aaKnown RBP15.41■□□□□ 0.06
CBX3P4-202ENST00000540428 TSR2Q969E8 191 aaKnown RBP15.41■□□□□ 0.06
CBX3P4-202ENST00000540428 MCOLN1Q9GZU1 580 aa15.41■□□□□ 0.06
CBX3P4-202ENST00000540428 MYOZ2Q9NPC6 264 aa15.41■□□□□ 0.06
CBX3P4-202ENST00000540428 MINPP1Q9UNW1 487 aa15.41■□□□□ 0.06
CBX3P4-202ENST00000540428 ASTN2O75129 1339 aaPredicted RBP15.41■□□□□ 0.06
CBX3P4-202ENST00000540428 KIF23Q02241 960 aaPredicted RBP15.4■□□□□ 0.06
CBX3P4-202ENST00000540428 TWISTNBQ3B726 338 aaPredicted RBP15.4■□□□□ 0.06
CBX3P4-202ENST00000540428 WWC1Q8IX03 1113 aa15.4■□□□□ 0.06
CBX3P4-202ENST00000540428 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
CBX3P4-202ENST00000540428 GREM2Q9H772 168 aa15.4■□□□□ 0.06
CBX3P4-202ENST00000540428 IL16Q14005 1332 aa15.4■□□□□ 0.06
CBX3P4-202ENST00000540428 MYO3BQ8WXR4 1341 aa15.4■□□□□ 0.06
CBX3P4-202ENST00000540428 H7C1W4 665 aa15.39■□□□□ 0.05
CBX3P4-202ENST00000540428 MMP14P50281 582 aa15.39■□□□□ 0.05
CBX3P4-202ENST00000540428 CCT4P50991 539 aaKnown RBP15.39■□□□□ 0.05
CBX3P4-202ENST00000540428 CWF19L2Q2TBE0 894 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms