RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 RBM26Q5T8P6 1007 aaKnown RBP25.97■■□□□ 1.75
LPCAT3-210ENST00000540090 C2orf69Q8N8R5 385 aa25.97■■□□□ 1.75
LPCAT3-210ENST00000540090 DGKZQ13574 1117 aa25.96■■□□□ 1.75
LPCAT3-210ENST00000540090 DUSP27Q5VZP5 1158 aa25.96■■□□□ 1.75
LPCAT3-210ENST00000540090 CCDC102AQ96A19 550 aa25.96■■□□□ 1.75
LPCAT3-210ENST00000540090 CFAP44Q96MT7 982 aa25.96■■□□□ 1.75
LPCAT3-210ENST00000540090 DDX60Q8IY21 1712 aaKnown RBP25.95■■□□□ 1.74
LPCAT3-210ENST00000540090 VIL1P09327 827 aaKnown RBP25.95■■□□□ 1.74
LPCAT3-210ENST00000540090 ZC3H12CQ9C0D7 883 aaKnown RBP25.95■■□□□ 1.74
LPCAT3-210ENST00000540090 PODXL2Q9NZ53 605 aa25.95■■□□□ 1.74
LPCAT3-210ENST00000540090 CASP8AP2Q9UKL3 1982 aa25.95■■□□□ 1.74
LPCAT3-210ENST00000540090 MYBBP1AQ9BQG0 1328 aaKnown RBP25.94■■□□□ 1.74
LPCAT3-210ENST00000540090 ADM5C9JUS6 153 aa25.94■■□□□ 1.74
LPCAT3-210ENST00000540090 ZBTB38Q8NAP3 1195 aaPredicted RBP25.93■■□□□ 1.74
LPCAT3-210ENST00000540090 KIF23Q02241 960 aaPredicted RBP25.92■■□□□ 1.74
LPCAT3-210ENST00000540090 KIF4BQ2VIQ3 1234 aa25.92■■□□□ 1.74
LPCAT3-210ENST00000540090 SEC31BQ9NQW1 1179 aa25.92■■□□□ 1.74
LPCAT3-210ENST00000540090 SAGE1Q9NXZ1 904 aa25.92■■□□□ 1.74
LPCAT3-210ENST00000540090 ADAMTS8Q9UP79 889 aa25.92■■□□□ 1.74
LPCAT3-210ENST00000540090 COL4A1P02462 1669 aa25.92■■□□□ 1.74
LPCAT3-210ENST00000540090 HSP90B1P14625 803 aaKnown RBP25.91■■□□□ 1.74
LPCAT3-210ENST00000540090 ZNF157P51786 506 aaPredicted RBP25.91■■□□□ 1.74
LPCAT3-210ENST00000540090 WDR43Q15061 677 aaKnown RBP eCLIP25.91■■□□□ 1.74
LPCAT3-210ENST00000540090 RIC3Q7Z5B4 369 aa25.91■■□□□ 1.74
LPCAT3-210ENST00000540090 SULF1Q8IWU6 871 aa25.91■■□□□ 1.74
LPCAT3-210ENST00000540090 MBIPQ9NS73 344 aa25.91■■□□□ 1.74
LPCAT3-210ENST00000540090 GGA3Q9NZ52 723 aa25.89■■□□□ 1.74
LPCAT3-210ENST00000540090 ANKIB1Q9P2G1 1089 aa25.89■■□□□ 1.74
LPCAT3-210ENST00000540090 GGA1Q9UJY5 639 aa25.89■■□□□ 1.74
LPCAT3-210ENST00000540090 G3V3G9 751 aa25.88■■□□□ 1.73
LPCAT3-210ENST00000540090 UFL1O94874 794 aa25.88■■□□□ 1.73
LPCAT3-210ENST00000540090 ZNF853P0CG23 659 aa25.88■■□□□ 1.73
LPCAT3-210ENST00000540090 ZNF280AP59817 542 aaPredicted RBP25.88■■□□□ 1.73
LPCAT3-210ENST00000540090 GOLGA2Q08379 1002 aa25.88■■□□□ 1.73
LPCAT3-210ENST00000540090 DCAF8Q5TAQ9 597 aa25.88■■□□□ 1.73
LPCAT3-210ENST00000540090 AGBL3Q8NEM8 1001 aa25.88■■□□□ 1.73
LPCAT3-210ENST00000540090 PHAXQ9H814 394 aaKnown RBP25.88■■□□□ 1.73
LPCAT3-210ENST00000540090 RNF186Q9NXI6 227 aa25.88■■□□□ 1.73
LPCAT3-210ENST00000540090 ASTN2O75129 1339 aaPredicted RBP25.88■■□□□ 1.73
LPCAT3-210ENST00000540090 POLR2AP24928 1970 aaKnown RBP25.87■■□□□ 1.73
LPCAT3-210ENST00000540090 CCDC191Q8NCU4 936 aa25.87■■□□□ 1.73
LPCAT3-210ENST00000540090 PCCAP05165 728 aaPredicted RBP25.86■■□□□ 1.73
LPCAT3-210ENST00000540090 SLC10A3P09131 477 aa25.86■■□□□ 1.73
LPCAT3-210ENST00000540090 CCDC152Q4G0S7 254 aa25.86■■□□□ 1.73
LPCAT3-210ENST00000540090 RSBN1LQ6PCB5 846 aaPredicted RBP25.86■■□□□ 1.73
LPCAT3-210ENST00000540090 CDCA5Q96FF9 252 aa25.86■■□□□ 1.73
LPCAT3-210ENST00000540090 CSRNP1Q96S65 589 aa25.86■■□□□ 1.73
LPCAT3-210ENST00000540090 MYD88Q99836 296 aa25.86■■□□□ 1.73
LPCAT3-210ENST00000540090 PDE8AO60658 829 aa25.85■■□□□ 1.73
LPCAT3-210ENST00000540090 TRPA1O75762 1119 aa25.85■■□□□ 1.73
LPCAT3-210ENST00000540090 DDX10Q13206 875 aaKnown RBP25.85■■□□□ 1.73
LPCAT3-210ENST00000540090 SCARF1Q14162 830 aa25.85■■□□□ 1.73
LPCAT3-210ENST00000540090 ZNF609O15014 1411 aa25.84■■□□□ 1.73
LPCAT3-210ENST00000540090 GMLQ99445 158 aa25.84■■□□□ 1.73
LPCAT3-210ENST00000540090 ANGEL2Q5VTE6 544 aaKnown RBP25.83■■□□□ 1.73
LPCAT3-210ENST00000540090 SCN9AQ15858 1988 aa25.83■■□□□ 1.73
LPCAT3-210ENST00000540090 REM2Q8IYK8 340 aaPredicted RBP25.82■■□□□ 1.72
LPCAT3-210ENST00000540090 IFT57Q9NWB7 429 aa25.82■■□□□ 1.72
LPCAT3-210ENST00000540090 CWC25Q9NXE8 425 aaPredicted RBP25.82■■□□□ 1.72
LPCAT3-210ENST00000540090 ELL2O00472 640 aaPredicted RBP25.81■■□□□ 1.72
LPCAT3-210ENST00000540090 USP17L8P0C7I0 530 aa25.81■■□□□ 1.72
LPCAT3-210ENST00000540090 FKBP1BP68106 108 aa25.81■■□□□ 1.72
LPCAT3-210ENST00000540090 PODNQ7Z5L7 613 aa25.81■■□□□ 1.72
LPCAT3-210ENST00000540090 JARID2Q92833 1246 aaPredicted RBP25.81■■□□□ 1.72
LPCAT3-210ENST00000540090 CCDC85AQ96PX6 553 aaPredicted RBP25.81■■□□□ 1.72
LPCAT3-210ENST00000540090 METTL22Q9BUU2 404 aaPredicted RBP25.81■■□□□ 1.72
LPCAT3-210ENST00000540090 XDHP47989 1333 aa25.81■■□□□ 1.72
LPCAT3-210ENST00000540090 ATP2B4P23634 1241 aa25.8■■□□□ 1.72
LPCAT3-210ENST00000540090 GNAI1P63096 354 aa25.8■■□□□ 1.72
LPCAT3-210ENST00000540090 ANKRD18AQ8IVF6 992 aa25.8■■□□□ 1.72
LPCAT3-210ENST00000540090 MYOZ2Q9NPC6 264 aa25.8■■□□□ 1.72
LPCAT3-210ENST00000540090 USP17L3A6NCW0 530 aa25.79■■□□□ 1.72
LPCAT3-210ENST00000540090 USP17L4A6NCW7 530 aa25.79■■□□□ 1.72
LPCAT3-210ENST00000540090 USP17L1Q7RTZ2 530 aa25.79■■□□□ 1.72
LPCAT3-210ENST00000540090 RASAL3Q86YV0 1011 aa25.79■■□□□ 1.72
LPCAT3-210ENST00000540090 PITPNM2Q9BZ72 1349 aa25.79■■□□□ 1.72
LPCAT3-210ENST00000540090 CALD1Q05682 793 aaKnown RBP25.78■■□□□ 1.72
LPCAT3-210ENST00000540090 C8orf58Q8NAV2 365 aa25.78■■□□□ 1.72
LPCAT3-210ENST00000540090 APAF1O14727 1248 aa25.77■■□□□ 1.72
LPCAT3-210ENST00000540090 DDX58O95786 925 aaKnown RBP25.77■■□□□ 1.72
LPCAT3-210ENST00000540090 CHMP4AQ9BY43 222 aa25.76■■□□□ 1.71
LPCAT3-210ENST00000540090 WTIPA6NIX2 430 aaPredicted RBP25.75■■□□□ 1.71
LPCAT3-210ENST00000540090 CTU1Q7Z7A3 348 aaKnown RBP25.75■■□□□ 1.71
LPCAT3-210ENST00000540090 CDC5LQ99459 802 aaKnown RBP25.75■■□□□ 1.71
LPCAT3-210ENST00000540090 CTSWP56202 376 aa25.74■■□□□ 1.71
LPCAT3-210ENST00000540090 CCDC30Q5VVM6 783 aa25.74■■□□□ 1.71
LPCAT3-210ENST00000540090 BSDC1Q9NW68 430 aaPredicted RBP25.74■■□□□ 1.71
LPCAT3-210ENST00000540090 MAP3K2Q9Y2U5 619 aa25.74■■□□□ 1.71
LPCAT3-210ENST00000540090 TTLL11Q8NHH1 800 aa25.73■■□□□ 1.71
LPCAT3-210ENST00000540090 MINPP1Q9UNW1 487 aa25.73■■□□□ 1.71
LPCAT3-210ENST00000540090 TNRC18O15417 2968 aaPredicted RBP25.72■■□□□ 1.71
LPCAT3-210ENST00000540090 IGKV5-2P06315 115 aa25.72■■□□□ 1.71
LPCAT3-210ENST00000540090 SOX10P56693 466 aa25.72■■□□□ 1.71
LPCAT3-210ENST00000540090 NBPF9Q3BBW0 867 aa25.72■■□□□ 1.71
LPCAT3-210ENST00000540090 MOB2Q70IA6 237 aa25.72■■□□□ 1.71
LPCAT3-210ENST00000540090 SCAF8Q9UPN6 1271 aaKnown RBP25.72■■□□□ 1.71
LPCAT3-210ENST00000540090 MED23Q9ULK4 1368 aa25.71■■□□□ 1.71
LPCAT3-210ENST00000540090 UBE2Q2LH0YL09 131 aa25.71■■□□□ 1.71
LPCAT3-210ENST00000540090 DACT2Q5SW24 774 aa25.71■■□□□ 1.71
LPCAT3-210ENST00000540090 KSR2Q6VAB6 950 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms