RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 GRIN3BO60391 1043 aa8.8□□□□□ -1
LPCAT3-209ENST00000540060 RLBP1P12271 317 aa8.8□□□□□ -1
LPCAT3-209ENST00000540060 FOXO4P98177 505 aa8.8□□□□□ -1
LPCAT3-209ENST00000540060 GRAPQ13588 217 aa8.8□□□□□ -1
LPCAT3-209ENST00000540060 CCDC152Q4G0S7 254 aa8.8□□□□□ -1
LPCAT3-209ENST00000540060 DDX46Q7L014 1031 aaKnown RBP8.8□□□□□ -1
LPCAT3-209ENST00000540060 SLC51AQ86UW1 340 aa8.8□□□□□ -1
LPCAT3-209ENST00000540060 TTLL11Q8NHH1 800 aa8.8□□□□□ -1
LPCAT3-209ENST00000540060 GRAPLQ8TC17 118 aaPredicted RBP8.8□□□□□ -1
LPCAT3-209ENST00000540060 C7orf43Q8WVR3 580 aa8.8□□□□□ -1
LPCAT3-209ENST00000540060 KAZALD1Q96I82 304 aa8.8□□□□□ -1
LPCAT3-209ENST00000540060 SUCLG2Q96I99 432 aa8.8□□□□□ -1
LPCAT3-209ENST00000540060 USP44Q9H0E7 712 aa8.8□□□□□ -1
LPCAT3-209ENST00000540060 ZNF646O15015 1829 aaPredicted RBP8.8□□□□□ -1
LPCAT3-209ENST00000540060 PSME4Q14997 1843 aa8.8□□□□□ -1
LPCAT3-209ENST00000540060 C21orf2O43822 256 aa8.79□□□□□ -1
LPCAT3-209ENST00000540060 CSF1RP07333 972 aa8.79□□□□□ -1
LPCAT3-209ENST00000540060 MKRN4PQ13434 485 aaPredicted RBP8.79□□□□□ -1
LPCAT3-209ENST00000540060 FAM161AQ3B820 660 aa8.79□□□□□ -1
LPCAT3-209ENST00000540060 EPHA10Q5JZY3 1008 aa8.79□□□□□ -1
LPCAT3-209ENST00000540060 OLFM4Q6UX06 510 aa8.79□□□□□ -1
LPCAT3-209ENST00000540060 FTSJ3Q8IY81 847 aaKnown RBP8.79□□□□□ -1
LPCAT3-209ENST00000540060 DZIP1LQ8IYY4 767 aaKnown RBP8.79□□□□□ -1
LPCAT3-209ENST00000540060 TMEM57Q8N5G2 664 aa8.79□□□□□ -1
LPCAT3-209ENST00000540060 CELF1Q92879 486 aaKnown RBP8.79□□□□□ -1
LPCAT3-209ENST00000540060 CCDC85AQ96PX6 553 aaPredicted RBP8.79□□□□□ -1
LPCAT3-209ENST00000540060 MEIS3Q99687 375 aa8.79□□□□□ -1
LPCAT3-209ENST00000540060 GREM2Q9H772 168 aa8.79□□□□□ -1
LPCAT3-209ENST00000540060 SEC31BQ9NQW1 1179 aa8.79□□□□□ -1
LPCAT3-209ENST00000540060 ARAP2Q8WZ64 1704 aa8.79□□□□□ -1
LPCAT3-209ENST00000540060 COL4A5P29400 1685 aa8.78□□□□□ -1
LPCAT3-209ENST00000540060 NFKBIEO00221 500 aa8.78□□□□□ -1
LPCAT3-209ENST00000540060 PLIN1O60240 522 aa8.78□□□□□ -1
LPCAT3-209ENST00000540060 RABL6Q3YEC7 729 aaPredicted RBP8.78□□□□□ -1
LPCAT3-209ENST00000540060 CCDC93Q567U6 631 aa8.78□□□□□ -1
LPCAT3-209ENST00000540060 SOGA3Q5TF21 947 aa8.78□□□□□ -1
LPCAT3-209ENST00000540060 ANKRD44Q8N8A2 993 aa8.78□□□□□ -1
LPCAT3-209ENST00000540060 PANK1Q8TE04 598 aa8.78□□□□□ -1
LPCAT3-209ENST00000540060 BICC1Q9H694 974 aaKnown RBP8.78□□□□□ -1
LPCAT3-209ENST00000540060 CREBZFQ9NS37 354 aa8.78□□□□□ -1
LPCAT3-209ENST00000540060 LTBP3Q9NS15 1303 aa8.78□□□□□ -1
LPCAT3-209ENST00000540060 BBOX1O75936 387 aa8.77□□□□□ -1.01
LPCAT3-209ENST00000540060 UBTFL1P0CB47 393 aaPredicted RBP8.77□□□□□ -1.01
LPCAT3-209ENST00000540060 ITGA6P23229 1130 aa8.77□□□□□ -1.01
LPCAT3-209ENST00000540060 RASSF7Q02833 373 aa8.77□□□□□ -1.01
LPCAT3-209ENST00000540060 LMBR1LQ6UX01 489 aa8.77□□□□□ -1.01
LPCAT3-209ENST00000540060 TMC4Q7Z404 712 aa8.77□□□□□ -1.01
LPCAT3-209ENST00000540060 COLQQ9Y215 455 aaPredicted RBP8.77□□□□□ -1.01
LPCAT3-209ENST00000540060 ATP6V0A2Q9Y487 856 aa8.77□□□□□ -1.01
LPCAT3-209ENST00000540060 MYH13Q9UKX3 1938 aa8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 GNAI3P08754 354 aa8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 MS4A1P11836 297 aa8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 PRELPP51888 382 aa8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 RRP1P56182 461 aaKnown RBP8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 RPS8P62241 208 aaKnown RBP8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 C20orf194Q5TEA3 1177 aa8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 CC2D2BQ6DHV5 1058 aa8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 ARHGAP27Q6ZUM4 889 aa8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 ITPRIPQ8IWB1 547 aa8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 SP8Q8IXZ3 490 aa8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 CDC5LQ99459 802 aaKnown RBP8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 TAOK3Q9H2K8 898 aa8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 LRRFIP2Q9Y608 721 aaKnown RBP8.76□□□□□ -1.01
LPCAT3-209ENST00000540060 ANKRD18BA2A2Z9 1011 aa8.75□□□□□ -1.01
LPCAT3-209ENST00000540060 FKBP4Q02790 459 aaKnown RBP eCLIP8.75□□□□□ -1.01
LPCAT3-209ENST00000540060 IFIT5Q13325 482 aaKnown RBP8.75□□□□□ -1.01
LPCAT3-209ENST00000540060 PDE3AQ14432 1141 aa8.75□□□□□ -1.01
LPCAT3-209ENST00000540060 MVPQ14764 893 aaKnown RBP8.75□□□□□ -1.01
LPCAT3-209ENST00000540060 GRIPAP1Q4V328 841 aa8.75□□□□□ -1.01
LPCAT3-209ENST00000540060 ANKRD18AQ8IVF6 992 aa8.75□□□□□ -1.01
LPCAT3-209ENST00000540060 RTKN2Q8IZC4 609 aa8.75□□□□□ -1.01
LPCAT3-209ENST00000540060 RNF166Q96A37 237 aaPredicted RBP8.75□□□□□ -1.01
LPCAT3-209ENST00000540060 PSMD1Q99460 953 aa8.75□□□□□ -1.01
LPCAT3-209ENST00000540060 CHMP3Q9Y3E7 222 aa8.75□□□□□ -1.01
LPCAT3-209ENST00000540060 SCN9AQ15858 1988 aa8.75□□□□□ -1.01
LPCAT3-209ENST00000540060 ZBTB7BO15156 539 aaPredicted RBP8.74□□□□□ -1.01
LPCAT3-209ENST00000540060 IGHMBP2P38935 993 aaKnown RBP8.74□□□□□ -1.01
LPCAT3-209ENST00000540060 MTX1Q13505 466 aa8.74□□□□□ -1.01
LPCAT3-209ENST00000540060 CCDC57Q2TAC2 916 aa8.74□□□□□ -1.01
LPCAT3-209ENST00000540060 RTFDC1Q9BY42 306 aaPredicted RBP8.74□□□□□ -1.01
LPCAT3-209ENST00000540060 BSDC1Q9NW68 430 aaPredicted RBP8.74□□□□□ -1.01
LPCAT3-209ENST00000540060 DDX19BQ9UMR2 479 aa8.74□□□□□ -1.01
LPCAT3-209ENST00000540060 HDAC5Q9UQL6 1122 aa8.74□□□□□ -1.01
LPCAT3-209ENST00000540060 COG6Q9Y2V7 657 aa8.74□□□□□ -1.01
LPCAT3-209ENST00000540060 SNPHO15079 494 aa8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 SEC24BO95487 1268 aa8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 GNAI2P04899 355 aa8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 LMNB1P20700 586 aa8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 RFX5P48382 616 aaPredicted RBP8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 GPSM2P81274 684 aa8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 DPP8Q6V1X1 898 aaPredicted RBP8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 MPNDQ8N594 471 aa8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 ZNF594Q96JF6 807 aaPredicted RBP8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 TMX4Q9H1E5 349 aaPredicted RBP8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 PODXL2Q9NZ53 605 aa8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 RNF181Q9P0P0 153 aa8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 WDR90Q96KV7 1748 aa8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 XDHP47989 1333 aa8.73□□□□□ -1.01
LPCAT3-209ENST00000540060 IARSP41252 1262 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms