RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MAP4K4O95819 1239 aaPredicted RBP20.49■□□□□ 0.87
COPS3-212ENST00000539941 SLC15A2Q16348 729 aa20.49■□□□□ 0.87
COPS3-212ENST00000539941 ERFEQ4G0M1 354 aa20.49■□□□□ 0.87
COPS3-212ENST00000539941 PHF14O94880 888 aa20.48■□□□□ 0.87
COPS3-212ENST00000539941 METTL24Q5JXM2 366 aa20.48■□□□□ 0.87
COPS3-212ENST00000539941 TPTE2Q6XPS3 522 aa20.48■□□□□ 0.87
COPS3-212ENST00000539941 BICDL1Q6ZP65 573 aa20.48■□□□□ 0.87
COPS3-212ENST00000539941 NBPF5PQ86XG9 351 aaPredicted RBP20.48■□□□□ 0.87
COPS3-212ENST00000539941 NEUROD6Q96NK8 337 aa20.48■□□□□ 0.87
COPS3-212ENST00000539941 BOLA2Q9H3K6 86 aa20.48■□□□□ 0.87
COPS3-212ENST00000539941 MROH5Q6ZUA9 1318 aa20.48■□□□□ 0.87
COPS3-212ENST00000539941 RFX7Q2KHR2 1363 aa20.48■□□□□ 0.87
COPS3-212ENST00000539941 CARMIL3Q8ND23 1372 aa20.48■□□□□ 0.87
COPS3-212ENST00000539941 ABCC12Q96J65 1359 aa20.48■□□□□ 0.87
COPS3-212ENST00000539941 GTF2E1P29083 439 aaPredicted RBP20.48■□□□□ 0.87
COPS3-212ENST00000539941 BECN1Q14457 450 aa20.48■□□□□ 0.87
COPS3-212ENST00000539941 TICAM2Q86XR7 235 aa20.48■□□□□ 0.87
COPS3-212ENST00000539941 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.48■□□□□ 0.87
COPS3-212ENST00000539941 RUFY2Q8WXA3 655 aa20.47■□□□□ 0.87
COPS3-212ENST00000539941 CDC5LQ99459 802 aaKnown RBP20.47■□□□□ 0.87
COPS3-212ENST00000539941 HAUS7Q99871 368 aa20.47■□□□□ 0.87
COPS3-212ENST00000539941 STK32BQ9NY57 414 aa20.47■□□□□ 0.87
COPS3-212ENST00000539941 IGHMBP2P38935 993 aaKnown RBP20.46■□□□□ 0.87
COPS3-212ENST00000539941 TIMM10P62072 90 aa20.46■□□□□ 0.87
COPS3-212ENST00000539941 VGLL2Q8N8G2 317 aa20.46■□□□□ 0.87
COPS3-212ENST00000539941 DIAPH3Q9NSV4 1193 aa20.46■□□□□ 0.87
COPS3-212ENST00000539941 DAXXQ9UER7 740 aaPredicted RBP20.46■□□□□ 0.87
COPS3-212ENST00000539941 ATP2B3Q16720 1220 aa20.45■□□□□ 0.86
COPS3-212ENST00000539941 MPHOSPH8Q99549 860 aa20.45■□□□□ 0.86
COPS3-212ENST00000539941 SPEF2Q9C093 1822 aa20.45■□□□□ 0.86
COPS3-212ENST00000539941 CASZ1Q86V15 1759 aa20.45■□□□□ 0.86
COPS3-212ENST00000539941 SGSM2O43147 1006 aa20.45■□□□□ 0.86
COPS3-212ENST00000539941 PDE8BO95263 885 aa20.45■□□□□ 0.86
COPS3-212ENST00000539941 SPON1Q9HCB6 807 aa20.45■□□□□ 0.86
COPS3-212ENST00000539941 CCDC158Q5M9N0 1113 aa20.44■□□□□ 0.86
COPS3-212ENST00000539941 XAGE2Q96GT9 111 aa20.44■□□□□ 0.86
COPS3-212ENST00000539941 NLRP3Q96P20 1036 aa20.44■□□□□ 0.86
COPS3-212ENST00000539941 SEC31BQ9NQW1 1179 aa20.44■□□□□ 0.86
COPS3-212ENST00000539941 NFIXQ14938 502 aa20.43■□□□□ 0.86
COPS3-212ENST00000539941 RAD50Q92878 1312 aa20.43■□□□□ 0.86
COPS3-212ENST00000539941 GYS1P13807 737 aa20.42■□□□□ 0.86
COPS3-212ENST00000539941 PUM3Q15397 648 aaKnown RBP20.42■□□□□ 0.86
COPS3-212ENST00000539941 GORABQ5T7V8 394 aa20.42■□□□□ 0.86
COPS3-212ENST00000539941 KIF2CQ99661 725 aa20.42■□□□□ 0.86
COPS3-212ENST00000539941 FSD1Q9BTV5 496 aa20.42■□□□□ 0.86
COPS3-212ENST00000539941 ARAP2Q8WZ64 1704 aa20.42■□□□□ 0.86
COPS3-212ENST00000539941 MCCP23508 829 aa20.42■□□□□ 0.86
COPS3-212ENST00000539941 ZNF827Q17R98 1081 aa20.42■□□□□ 0.86
COPS3-212ENST00000539941 FLAD1Q8NFF5 587 aa20.42■□□□□ 0.86
COPS3-212ENST00000539941 AKT1S1Q96B36 256 aa20.42■□□□□ 0.86
COPS3-212ENST00000539941 ZNF512BQ96KM6 892 aaPredicted RBP20.42■□□□□ 0.86
COPS3-212ENST00000539941 LPIN2Q92539 896 aa20.41■□□□□ 0.86
COPS3-212ENST00000539941 ANO2Q9NQ90 1003 aa20.41■□□□□ 0.86
COPS3-212ENST00000539941 IFIT1P09914 478 aaKnown RBP20.4■□□□□ 0.86
COPS3-212ENST00000539941 FGFR2P21802 821 aa20.4■□□□□ 0.86
COPS3-212ENST00000539941 GLIPR1L2Q4G1C9 344 aa20.4■□□□□ 0.86
COPS3-212ENST00000539941 TTC39AQ5SRH9 613 aa20.4■□□□□ 0.86
COPS3-212ENST00000539941 CWC27Q6UX04 472 aaKnown RBP20.4■□□□□ 0.86
COPS3-212ENST00000539941 C3orf67Q6ZVT6 689 aa20.4■□□□□ 0.86
COPS3-212ENST00000539941 ANKRD18AQ8IVF6 992 aa20.4■□□□□ 0.86
COPS3-212ENST00000539941 SNRKQ9NRH2 765 aa20.4■□□□□ 0.86
COPS3-212ENST00000539941 ZBTB7AO95365 584 aa20.39■□□□□ 0.86
COPS3-212ENST00000539941 ADORA1P30542 326 aa20.39■□□□□ 0.86
COPS3-212ENST00000539941 RABEP1Q15276 862 aa20.39■□□□□ 0.86
COPS3-212ENST00000539941 CNBD1Q8NA66 436 aa20.39■□□□□ 0.86
COPS3-212ENST00000539941 KBTBD3Q8NAB2 608 aa20.39■□□□□ 0.86
COPS3-212ENST00000539941 SNX21Q969T3 373 aa20.39■□□□□ 0.86
COPS3-212ENST00000539941 DNAJC2Q99543 621 aaKnown RBP20.39■□□□□ 0.86
COPS3-212ENST00000539941 NPHP1O15259 732 aa20.38■□□□□ 0.85
COPS3-212ENST00000539941 SLC5A1P13866 664 aa20.38■□□□□ 0.85
COPS3-212ENST00000539941 TM4SF1P30408 202 aa20.38■□□□□ 0.85
COPS3-212ENST00000539941 ANAPC15P60006 121 aa20.38■□□□□ 0.85
COPS3-212ENST00000539941 KIAA1211Q6ZU35 1233 aa20.38■□□□□ 0.85
COPS3-212ENST00000539941 BSDC1Q9NW68 430 aaPredicted RBP20.38■□□□□ 0.85
COPS3-212ENST00000539941 PAG1Q9NWQ8 432 aa20.38■□□□□ 0.85
COPS3-212ENST00000539941 TFCP2L1Q9NZI6 479 aa20.38■□□□□ 0.85
COPS3-212ENST00000539941 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.38■□□□□ 0.85
COPS3-212ENST00000539941 PTGER2P43116 358 aa20.38■□□□□ 0.85
COPS3-212ENST00000539941 IL17RAQ96F46 866 aa20.38■□□□□ 0.85
COPS3-212ENST00000539941 ATF5Q9Y2D1 282 aaPredicted RBP20.38■□□□□ 0.85
COPS3-212ENST00000539941 TBC1D2Q9BYX2 928 aa20.37■□□□□ 0.85
COPS3-212ENST00000539941 IL25Q9H293 177 aa20.37■□□□□ 0.85
COPS3-212ENST00000539941 RTN4Q9NQC3 1192 aaKnown RBP20.37■□□□□ 0.85
COPS3-212ENST00000539941 NMIQ13287 307 aaPredicted RBP20.36■□□□□ 0.85
COPS3-212ENST00000539941 LRRFIP1Q32MZ4 808 aaKnown RBP20.36■□□□□ 0.85
COPS3-212ENST00000539941 LSG1Q9H089 658 aaKnown RBP20.36■□□□□ 0.85
COPS3-212ENST00000539941 UQCRFS1P1P0C7P4 283 aa20.35■□□□□ 0.85
COPS3-212ENST00000539941 CHRNDQ07001 517 aa20.35■□□□□ 0.85
COPS3-212ENST00000539941 GSE1Q14687 1217 aa20.35■□□□□ 0.85
COPS3-212ENST00000539941 EDC3Q96F86 508 aaKnown RBP20.35■□□□□ 0.85
COPS3-212ENST00000539941 A0A1B0GUL6 1792 aa20.35■□□□□ 0.85
COPS3-212ENST00000539941 TNRC6CQ9HCJ0 1690 aaKnown RBP20.35■□□□□ 0.85
COPS3-212ENST00000539941 GOLIM4O00461 696 aa20.35■□□□□ 0.85
COPS3-212ENST00000539941 RPS8P62241 208 aaKnown RBP20.35■□□□□ 0.85
COPS3-212ENST00000539941 ST5P78524 1137 aa20.35■□□□□ 0.85
COPS3-212ENST00000539941 PRR5LQ6MZQ0 368 aa20.35■□□□□ 0.85
COPS3-212ENST00000539941 DDX46Q7L014 1031 aaKnown RBP20.35■□□□□ 0.85
COPS3-212ENST00000539941 HSCBQ8IWL3 235 aa20.35■□□□□ 0.85
COPS3-212ENST00000539941 MED23Q9ULK4 1368 aa20.34■□□□□ 0.85
COPS3-212ENST00000539941 SERPINB2P05120 415 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms