RNA–Protein interactions for RNA: ENST00000539814.5

LDHA-217, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-217ENST00000539814 LMOD3Q0VAK6 560 aa10.22□□□□□ -0.77
LDHA-217ENST00000539814 SEMA3FQ13275 785 aa10.22□□□□□ -0.77
LDHA-217ENST00000539814 LAPTM4BQ86VI4 370 aa10.22□□□□□ -0.77
LDHA-217ENST00000539814 C5P01031 1676 aa10.22□□□□□ -0.77
LDHA-217ENST00000539814 PTCD1O75127 700 aaKnown RBP10.21□□□□□ -0.77
LDHA-217ENST00000539814 EZH2Q15910 746 aaKnown RBP10.21□□□□□ -0.77
LDHA-217ENST00000539814 ERICH6BQ5W0A0 696 aa10.21□□□□□ -0.77
LDHA-217ENST00000539814 B4GALNT3Q6L9W6 998 aa10.21□□□□□ -0.77
LDHA-217ENST00000539814 TSR2Q969E8 191 aaKnown RBP10.21□□□□□ -0.77
LDHA-217ENST00000539814 TJP1Q07157 1748 aa10.21□□□□□ -0.78
LDHA-217ENST00000539814 NUP188Q5SRE5 1749 aa10.21□□□□□ -0.78
LDHA-217ENST00000539814 PRAMEF22A3QJZ6 481 aa10.2□□□□□ -0.78
LDHA-217ENST00000539814 SF3B2Q13435 895 aaKnown RBP10.2□□□□□ -0.78
LDHA-217ENST00000539814 TAF7Q15545 349 aaPredicted RBP10.2□□□□□ -0.78
LDHA-217ENST00000539814 KRT24Q2M2I5 525 aa10.2□□□□□ -0.78
LDHA-217ENST00000539814 TBC1D9Q6ZT07 1266 aa10.2□□□□□ -0.78
LDHA-217ENST00000539814 RREB1Q92766 1687 aa10.2□□□□□ -0.78
LDHA-217ENST00000539814 SLC4A9Q96Q91 983 aa10.2□□□□□ -0.78
LDHA-217ENST00000539814 TSPYL4Q9UJ04 414 aa10.2□□□□□ -0.78
LDHA-217ENST00000539814 GNEQ9Y223 722 aaKnown RBP10.2□□□□□ -0.78
LDHA-217ENST00000539814 RGPD3A6NKT7 1758 aaPredicted RBP10.19□□□□□ -0.78
LDHA-217ENST00000539814 RGPD4Q7Z3J3 1758 aa10.19□□□□□ -0.78
LDHA-217ENST00000539814 ZNF521Q96K83 1311 aa10.19□□□□□ -0.78
LDHA-217ENST00000539814 GOLGA8CPA6NN73 597 aa10.19□□□□□ -0.78
LDHA-217ENST00000539814 ITPK1Q13572 414 aa10.19□□□□□ -0.78
LDHA-217ENST00000539814 ZNF496Q96IT1 587 aaPredicted RBP10.19□□□□□ -0.78
LDHA-217ENST00000539814 MBIPQ9NS73 344 aa10.19□□□□□ -0.78
LDHA-217ENST00000539814 C6orf229H3BNL8 230 aa10.18□□□□□ -0.78
LDHA-217ENST00000539814 ATP9BO43861 1147 aa10.18□□□□□ -0.78
LDHA-217ENST00000539814 BAG6P46379 1132 aa10.18□□□□□ -0.78
LDHA-217ENST00000539814 TXNRD1Q16881 649 aa10.18□□□□□ -0.78
LDHA-217ENST00000539814 ZNF790Q6PG37 636 aa10.18□□□□□ -0.78
LDHA-217ENST00000539814 SMIM5Q71RC9 77 aa10.18□□□□□ -0.78
LDHA-217ENST00000539814 TTC5Q8N0Z6 440 aa10.18□□□□□ -0.78
LDHA-217ENST00000539814 KCTD12Q96CX2 325 aaKnown RBP10.18□□□□□ -0.78
LDHA-217ENST00000539814 CAMKK2Q96RR4 588 aa10.18□□□□□ -0.78
LDHA-217ENST00000539814 LRRC4BQ9NT99 713 aa10.18□□□□□ -0.78
LDHA-217ENST00000539814 CCNL1Q9UK58 526 aaPredicted RBP10.18□□□□□ -0.78
LDHA-217ENST00000539814 TAF1LQ8IZX4 1826 aa10.18□□□□□ -0.78
LDHA-217ENST00000539814 COL5A3P25940 1745 aaPredicted RBP10.18□□□□□ -0.78
LDHA-217ENST00000539814 FANCIQ9NVI1 1328 aa10.17□□□□□ -0.78
LDHA-217ENST00000539814 LOC102724428A0A0B4J2F2 783 aa10.17□□□□□ -0.78
LDHA-217ENST00000539814 CHL1O00533 1208 aa10.17□□□□□ -0.78
LDHA-217ENST00000539814 SIK1P57059 783 aa10.17□□□□□ -0.78
LDHA-217ENST00000539814 SLF2Q8IX21 1173 aa10.17□□□□□ -0.78
LDHA-217ENST00000539814 DNAJC10Q8IXB1 793 aa10.17□□□□□ -0.78
LDHA-217ENST00000539814 LINC00116Q8NCU8 138 aa10.17□□□□□ -0.78
LDHA-217ENST00000539814 ZFRQ96KR1 1074 aaKnown RBP10.17□□□□□ -0.78
LDHA-217ENST00000539814 ELL2O00472 640 aaPredicted RBP10.16□□□□□ -0.78
LDHA-217ENST00000539814 SLC10A3P09131 477 aa10.16□□□□□ -0.78
LDHA-217ENST00000539814 ZNF853P0CG23 659 aa10.16□□□□□ -0.78
LDHA-217ENST00000539814 ATP6V1AP38606 617 aa10.16□□□□□ -0.78
LDHA-217ENST00000539814 PIP4K2AP48426 406 aaPredicted RBP10.16□□□□□ -0.78
LDHA-217ENST00000539814 EIF4A1P60842 406 aaKnown RBP10.16□□□□□ -0.78
LDHA-217ENST00000539814 NR6A1Q15406 480 aa10.16□□□□□ -0.78
LDHA-217ENST00000539814 PNMA1Q8ND90 353 aa10.16□□□□□ -0.78
LDHA-217ENST00000539814 SMARCC1Q92922 1105 aaPredicted RBP10.16□□□□□ -0.78
LDHA-217ENST00000539814 WNT2BQ93097 391 aa10.16□□□□□ -0.78
LDHA-217ENST00000539814 IFT57Q9NWB7 429 aa10.16□□□□□ -0.78
LDHA-217ENST00000539814 TUBGCP6Q96RT7 1819 aa10.16□□□□□ -0.78
LDHA-217ENST00000539814 LAMB4A4D0S4 1761 aa10.16□□□□□ -0.78
LDHA-217ENST00000539814 C4BP0C0L5 1744 aa10.16□□□□□ -0.78
LDHA-217ENST00000539814 HEG1Q9ULI3 1381 aa10.15□□□□□ -0.78
LDHA-217ENST00000539814 PLSCR1O15162 318 aa10.15□□□□□ -0.78
LDHA-217ENST00000539814 GNAI1P63096 354 aa10.15□□□□□ -0.78
LDHA-217ENST00000539814 CALD1Q05682 793 aaKnown RBP10.15□□□□□ -0.78
LDHA-217ENST00000539814 ZNF827Q17R98 1081 aa10.15□□□□□ -0.78
LDHA-217ENST00000539814 AMIGO3Q86WK7 504 aa10.15□□□□□ -0.78
LDHA-217ENST00000539814 CCDC125Q86Z20 511 aa10.15□□□□□ -0.78
LDHA-217ENST00000539814 WDR63Q8IWG1 891 aa10.15□□□□□ -0.78
LDHA-217ENST00000539814 C8orf58Q8NAV2 365 aa10.15□□□□□ -0.78
LDHA-217ENST00000539814 ANKK1Q8NFD2 765 aa10.15□□□□□ -0.78
LDHA-217ENST00000539814 FMNL2Q96PY5 1086 aa10.15□□□□□ -0.78
LDHA-217ENST00000539814 ZBED9Q6R2W3 1325 aa10.14□□□□□ -0.79
LDHA-217ENST00000539814 MYH14Q7Z406 1995 aaKnown RBP10.14□□□□□ -0.79
LDHA-217ENST00000539814 TCERG1O14776 1098 aaKnown RBP10.14□□□□□ -0.79
LDHA-217ENST00000539814 TSPYL6Q8N831 410 aa10.14□□□□□ -0.79
LDHA-217ENST00000539814 CICQ96RK0 1608 aaPredicted RBP10.14□□□□□ -0.79
LDHA-217ENST00000539814 IL16Q14005 1332 aa10.13□□□□□ -0.79
LDHA-217ENST00000539814 ZNF831Q5JPB2 1677 aa10.13□□□□□ -0.79
LDHA-217ENST00000539814 UNCXA6NJT0 531 aa10.13□□□□□ -0.79
LDHA-217ENST00000539814 EXOSC9Q06265 439 aaKnown RBP10.13□□□□□ -0.79
LDHA-217ENST00000539814 SLFN5Q08AF3 891 aa10.13□□□□□ -0.79
LDHA-217ENST00000539814 ELOAQ14241 798 aaKnown RBP10.13□□□□□ -0.79
LDHA-217ENST00000539814 TMEM164Q5U3C3 297 aa10.13□□□□□ -0.79
LDHA-217ENST00000539814 ZMIZ1Q9ULJ6 1067 aa10.13□□□□□ -0.79
LDHA-217ENST00000539814 USP16Q9Y5T5 823 aa10.13□□□□□ -0.79
LDHA-217ENST00000539814 GIGYF1O75420 1035 aaPredicted RBP10.12□□□□□ -0.79
LDHA-217ENST00000539814 EIF2S2P20042 333 aaKnown RBP10.12□□□□□ -0.79
LDHA-217ENST00000539814 SLC27A3Q5K4L6 730 aa10.12□□□□□ -0.79
LDHA-217ENST00000539814 SWT1Q5T5J6 900 aaKnown RBP10.12□□□□□ -0.79
LDHA-217ENST00000539814 DUSP27Q5VZP5 1158 aa10.12□□□□□ -0.79
LDHA-217ENST00000539814 THSD4Q6ZMP0 1018 aa10.12□□□□□ -0.79
LDHA-217ENST00000539814 STK32AQ8WU08 396 aa10.12□□□□□ -0.79
LDHA-217ENST00000539814 UBR3Q6ZT12 1888 aa10.11□□□□□ -0.79
LDHA-217ENST00000539814 ANXA1P04083 346 aa10.11□□□□□ -0.79
LDHA-217ENST00000539814 A1BGP04217 495 aa10.11□□□□□ -0.79
LDHA-217ENST00000539814 SNRPA1P09661 255 aaKnown RBP10.11□□□□□ -0.79
LDHA-217ENST00000539814 CYP19A1P11511 503 aaPredicted RBP10.11□□□□□ -0.79
LDHA-217ENST00000539814 CRKLP46109 303 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms