RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 TNIP1Q15025 636 aa21.42■■□□□ 1.02
DDB1-215ENST00000539712 BEND3Q5T5X7 828 aa21.42■■□□□ 1.02
DDB1-215ENST00000539712 USP50Q70EL3 339 aaPredicted RBP21.42■■□□□ 1.02
DDB1-215ENST00000539712 ANKRD18AQ8IVF6 992 aa21.42■■□□□ 1.02
DDB1-215ENST00000539712 SHTN1A0MZ66 631 aa21.41■■□□□ 1.02
DDB1-215ENST00000539712 CSF1RP07333 972 aa21.41■■□□□ 1.02
DDB1-215ENST00000539712 DOK7Q18PE1 504 aa21.41■■□□□ 1.02
DDB1-215ENST00000539712 ADARB2Q9NS39 739 aaKnown RBP21.41■■□□□ 1.02
DDB1-215ENST00000539712 MYH3P11055 1940 aa21.4■■□□□ 1.02
DDB1-215ENST00000539712 PSMD14O00487 310 aa21.4■■□□□ 1.02
DDB1-215ENST00000539712 UFL1O94874 794 aa21.4■■□□□ 1.02
DDB1-215ENST00000539712 HIRAP54198 1017 aaPredicted RBP21.4■■□□□ 1.02
DDB1-215ENST00000539712 EYA3Q99504 573 aa21.4■■□□□ 1.02
DDB1-215ENST00000539712 ANKIB1Q9P2G1 1089 aa21.4■■□□□ 1.02
DDB1-215ENST00000539712 ECE2O60344 883 aa21.39■■□□□ 1.01
DDB1-215ENST00000539712 FMR1Q06787 632 aaKnown RBP eCLIP21.39■■□□□ 1.011e-7■■■■■ 28.3
DDB1-215ENST00000539712 CDC5LQ99459 802 aaKnown RBP21.39■■□□□ 1.01
DDB1-215ENST00000539712 BSDC1Q9NW68 430 aaPredicted RBP21.39■■□□□ 1.01
DDB1-215ENST00000539712 GGA1Q9UJY5 639 aa21.39■■□□□ 1.01
DDB1-215ENST00000539712 MINPP1Q9UNW1 487 aa21.39■■□□□ 1.01
DDB1-215ENST00000539712 ZBTB12Q9Y330 459 aaPredicted RBP21.39■■□□□ 1.01
DDB1-215ENST00000539712 SCN9AQ15858 1988 aa21.38■■□□□ 1.01
DDB1-215ENST00000539712 TMEM88BA6NKF7 163 aa21.38■■□□□ 1.01
DDB1-215ENST00000539712 ZC3H12CQ9C0D7 883 aaKnown RBP21.38■■□□□ 1.01
DDB1-215ENST00000539712 PGAP2Q9UHJ9 254 aa21.38■■□□□ 1.01
DDB1-215ENST00000539712 CNOT7Q9UIV1 285 aaKnown RBP21.38■■□□□ 1.01
DDB1-215ENST00000539712 XDHP47989 1333 aa21.37■■□□□ 1.01
DDB1-215ENST00000539712 FOXO4P98177 505 aa21.37■■□□□ 1.01
DDB1-215ENST00000539712 SLFN5Q08AF3 891 aa21.37■■□□□ 1.01
DDB1-215ENST00000539712 TRPM4Q8TD43 1214 aa21.37■■□□□ 1.01
DDB1-215ENST00000539712 BCL2L13Q9BXK5 485 aa21.37■■□□□ 1.01
DDB1-215ENST00000539712 MKRN1Q9UHC7 482 aaKnown RBP21.37■■□□□ 1.01
DDB1-215ENST00000539712 FAM161AQ3B820 660 aa21.36■■□□□ 1.01
DDB1-215ENST00000539712 DPF2Q92785 391 aa21.36■■□□□ 1.01
DDB1-215ENST00000539712 E9PSI1 815 aa21.35■■□□□ 1.01
DDB1-215ENST00000539712 CCER2I3L3R5 266 aa21.35■■□□□ 1.01
DDB1-215ENST00000539712 TRAF5O00463 557 aa21.35■■□□□ 1.01
DDB1-215ENST00000539712 ITGA6P23229 1130 aa21.35■■□□□ 1.01
DDB1-215ENST00000539712 MICALL2Q8IY33 904 aa21.35■■□□□ 1.01
DDB1-215ENST00000539712 MRPL50Q8N5N7 158 aaKnown RBP21.35■■□□□ 1.01
DDB1-215ENST00000539712 CDCA7LQ96GN5 454 aa21.35■■□□□ 1.01
DDB1-215ENST00000539712 CNTNAP1P78357 1384 aa21.35■■□□□ 1.01
DDB1-215ENST00000539712 EGFRP00533 1210 aa21.34■■□□□ 1.01
DDB1-215ENST00000539712 VIL1P09327 827 aaKnown RBP21.34■■□□□ 1.01
DDB1-215ENST00000539712 ATP2B4P23634 1241 aa21.34■■□□□ 1.01
DDB1-215ENST00000539712 EPHA10Q5JZY3 1008 aa21.34■■□□□ 1.01
DDB1-215ENST00000539712 TRMT2AQ8IZ69 625 aaKnown RBP21.34■■□□□ 1.01
DDB1-215ENST00000539712 CST9Q5W186 159 aa21.33■■□□□ 1.01
DDB1-215ENST00000539712 SPEF2Q9C093 1822 aa21.33■■□□□ 1.01
DDB1-215ENST00000539712 RPS12P25398 132 aaKnown RBP21.32■■□□□ 1
DDB1-215ENST00000539712 SAMD7Q7Z3H4 446 aa21.32■■□□□ 1
DDB1-215ENST00000539712 ZC3H15Q8WU90 426 aaKnown RBP21.32■■□□□ 1
DDB1-215ENST00000539712 H7C1D1 291 aa21.31■■□□□ 1
DDB1-215ENST00000539712 GRM8O00222 908 aa21.31■■□□□ 1
DDB1-215ENST00000539712 CCT4P50991 539 aaKnown RBP21.31■■□□□ 1
DDB1-215ENST00000539712 TXNRD3Q86VQ6 643 aa21.31■■□□□ 1
DDB1-215ENST00000539712 SSH1Q8WYL5 1049 aa21.31■■□□□ 1
DDB1-215ENST00000539712 RASSF10A6NK89 507 aa21.3■■□□□ 1
DDB1-215ENST00000539712 ALDH1L1O75891 902 aa21.3■■□□□ 1
DDB1-215ENST00000539712 IGHMBP2P38935 993 aaKnown RBP21.3■■□□□ 1
DDB1-215ENST00000539712 VEGFBP49765 207 aa21.3■■□□□ 1
DDB1-215ENST00000539712 KAZALD1Q96I82 304 aa21.3■■□□□ 1
DDB1-215ENST00000539712 GMLQ99445 158 aa21.3■■□□□ 1
DDB1-215ENST00000539712 GLIS2Q9BZE0 524 aaPredicted RBP21.3■■□□□ 1
DDB1-215ENST00000539712 MED23Q9ULK4 1368 aa21.3■■□□□ 1
DDB1-215ENST00000539712 SLC4A10Q6U841 1118 aa21.29■■□□□ 1
DDB1-215ENST00000539712 SRCIN1Q9C0H9 1055 aa21.29■■□□□ 1
DDB1-215ENST00000539712 ZNF609O15014 1411 aa21.29■■□□□ 1
DDB1-215ENST00000539712 KLRK1P26718 216 aa21.28■■□□□ 1
DDB1-215ENST00000539712 TBC1D10BQ4KMP7 808 aaPredicted RBP21.28■■□□□ 1
DDB1-215ENST00000539712 LMBR1LQ6UX01 489 aa21.28■■□□□ 1
DDB1-215ENST00000539712 PODNQ7Z5L7 613 aa21.28■■□□□ 1
DDB1-215ENST00000539712 LEMD3Q9Y2U8 911 aa21.28■■□□□ 1
DDB1-215ENST00000539712 PSME4Q14997 1843 aa21.27■■□□□ 1
DDB1-215ENST00000539712 ANKRD18BA2A2Z9 1011 aa21.27■■□□□ 1
DDB1-215ENST00000539712 HSPA1AP0DMV8 641 aaKnown RBP21.27■■□□□ 1
DDB1-215ENST00000539712 HSPA1BP0DMV9 641 aaKnown RBP21.27■■□□□ 1
DDB1-215ENST00000539712 ZNF280AP59817 542 aaPredicted RBP21.27■■□□□ 1
DDB1-215ENST00000539712 RSBN1LQ6PCB5 846 aaPredicted RBP21.27■■□□□ 1
DDB1-215ENST00000539712 DLK2Q6UY11 383 aa21.27■■□□□ 1
DDB1-215ENST00000539712 MPHOSPH8Q99549 860 aa21.27■■□□□ 1
DDB1-215ENST00000539712 ANKRD2Q9GZV1 360 aa21.27■■□□□ 1
DDB1-215ENST00000539712 ZNF804BA4D1E1 1349 aa21.27■□□□□ 0.99
DDB1-215ENST00000539712 UTYO14607 1347 aa21.27■□□□□ 0.99
DDB1-215ENST00000539712 IRS2Q9Y4H2 1338 aa21.27■□□□□ 0.99
DDB1-215ENST00000539712 G3V3G9 751 aa21.26■□□□□ 0.99
DDB1-215ENST00000539712 SNAP23O00161 211 aa21.26■□□□□ 0.99
DDB1-215ENST00000539712 NBPF7P0C2Y1 421 aaPredicted RBP21.26■□□□□ 0.99
DDB1-215ENST00000539712 CHRNDQ07001 517 aa21.26■□□□□ 0.99
DDB1-215ENST00000539712 IFIT5Q13325 482 aaKnown RBP21.26■□□□□ 0.99
DDB1-215ENST00000539712 DEFB115Q30KQ5 88 aa21.26■□□□□ 0.99
DDB1-215ENST00000539712 DCAF8Q5TAQ9 597 aa21.26■□□□□ 0.99
DDB1-215ENST00000539712 AGBL3Q8NEM8 1001 aa21.26■□□□□ 0.99
DDB1-215ENST00000539712 C9orf78Q9NZ63 289 aaPredicted RBP21.26■□□□□ 0.99
DDB1-215ENST00000539712 TRPM7Q96QT4 1865 aa21.26■□□□□ 0.99
DDB1-215ENST00000539712 USP17L3A6NCW0 530 aa21.25■□□□□ 0.99
DDB1-215ENST00000539712 USP17L4A6NCW7 530 aa21.25■□□□□ 0.99
DDB1-215ENST00000539712 RBM26Q5T8P6 1007 aaKnown RBP21.25■□□□□ 0.99
DDB1-215ENST00000539712 CDC37L1Q7L3B6 337 aa21.25■□□□□ 0.99
DDB1-215ENST00000539712 USP17L1Q7RTZ2 530 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms