RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 ZNF609O15014 1411 aa10.78□□□□□ -0.68
DDB1-213ENST00000539332 TNRC6CQ9HCJ0 1690 aaKnown RBP10.78□□□□□ -0.68
DDB1-213ENST00000539332 POLRMTO00411 1230 aaKnown RBP10.77□□□□□ -0.68
DDB1-213ENST00000539332 NPHP1O15259 732 aa10.77□□□□□ -0.68
DDB1-213ENST00000539332 GLRX3O76003 335 aaKnown RBP10.77□□□□□ -0.68
DDB1-213ENST00000539332 SERPINB2P05120 415 aa10.77□□□□□ -0.68
DDB1-213ENST00000539332 MFAP1P55081 439 aaKnown RBP10.77□□□□□ -0.68
DDB1-213ENST00000539332 BECN1Q14457 450 aa10.77□□□□□ -0.68
DDB1-213ENST00000539332 CCDC57Q2TAC2 916 aa10.77□□□□□ -0.68
DDB1-213ENST00000539332 GLIPR1L2Q4G1C9 344 aa10.77□□□□□ -0.68
DDB1-213ENST00000539332 ATG9AQ7Z3C6 839 aa10.77□□□□□ -0.68
DDB1-213ENST00000539332 EAF2Q96CJ1 260 aaPredicted RBP10.77□□□□□ -0.68
DDB1-213ENST00000539332 PDGFDQ9GZP0 370 aaPredicted RBP10.77□□□□□ -0.68
DDB1-213ENST00000539332 SIL1Q9H173 461 aa10.77□□□□□ -0.68
DDB1-213ENST00000539332 GREM2Q9H772 168 aa10.77□□□□□ -0.68
DDB1-213ENST00000539332 GPR108Q9NPR9 543 aa10.77□□□□□ -0.68
DDB1-213ENST00000539332 RTL9Q8NET4 1388 aa10.77□□□□□ -0.69
DDB1-213ENST00000539332 MMP10P09238 476 aa10.77□□□□□ -0.69
DDB1-213ENST00000539332 IFIT5Q13325 482 aaKnown RBP10.77□□□□□ -0.69
DDB1-213ENST00000539332 MSL1Q68DK7 614 aa10.77□□□□□ -0.69
DDB1-213ENST00000539332 PRR5LQ6MZQ0 368 aa10.77□□□□□ -0.69
DDB1-213ENST00000539332 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
DDB1-213ENST00000539332 CCDC24Q8N4L8 307 aa10.77□□□□□ -0.69
DDB1-213ENST00000539332 C22orf23Q9BZE7 217 aa10.77□□□□□ -0.69
DDB1-213ENST00000539332 ECHDC1Q9NTX5 307 aa10.77□□□□□ -0.69
DDB1-213ENST00000539332 AKAP11Q9UKA4 1901 aa10.77□□□□□ -0.69
DDB1-213ENST00000539332 ANKRD31Q8N7Z5 1873 aa10.77□□□□□ -0.69
DDB1-213ENST00000539332 ERC2O15083 957 aa10.76□□□□□ -0.69
DDB1-213ENST00000539332 ITGA6P23229 1130 aa10.76□□□□□ -0.69
DDB1-213ENST00000539332 SF3B3Q15393 1217 aaKnown RBP10.76□□□□□ -0.69
DDB1-213ENST00000539332 CCDC152Q4G0S7 254 aa10.76□□□□□ -0.69
DDB1-213ENST00000539332 ILDR2Q71H61 639 aa10.76□□□□□ -0.69
DDB1-213ENST00000539332 AACSQ86V21 672 aa10.76□□□□□ -0.69
DDB1-213ENST00000539332 GPATCH3Q96I76 525 aa10.76□□□□□ -0.69
DDB1-213ENST00000539332 ZNF594Q96JF6 807 aaPredicted RBP10.76□□□□□ -0.69
DDB1-213ENST00000539332 RIC1Q4ADV7 1423 aa10.76□□□□□ -0.69
DDB1-213ENST00000539332 ANKRD18BA2A2Z9 1011 aa10.75□□□□□ -0.69
DDB1-213ENST00000539332 EYA2O00167 538 aa10.75□□□□□ -0.69
DDB1-213ENST00000539332 IFIT2P09913 472 aaKnown RBP10.75□□□□□ -0.69
DDB1-213ENST00000539332 IL15P40933 162 aaPredicted RBP10.75□□□□□ -0.69
DDB1-213ENST00000539332 TNNI3KQ59H18 835 aa10.75□□□□□ -0.69
DDB1-213ENST00000539332 NLRP3Q96P20 1036 aa10.75□□□□□ -0.69
DDB1-213ENST00000539332 FPGT-TNNI3KV9GXZ4 949 aa10.75□□□□□ -0.69
DDB1-213ENST00000539332 CHMLP26374 656 aa10.75□□□□□ -0.69
DDB1-213ENST00000539332 ST5P78524 1137 aa10.75□□□□□ -0.69
DDB1-213ENST00000539332 TFCP2Q12800 502 aa10.75□□□□□ -0.69
DDB1-213ENST00000539332 CASC1Q6TDU7 716 aa10.75□□□□□ -0.69
DDB1-213ENST00000539332 COL4A1P02462 1669 aa10.74□□□□□ -0.69
DDB1-213ENST00000539332 EPB41L2O43491 1005 aaKnown RBP10.74□□□□□ -0.69
DDB1-213ENST00000539332 TAF7LQ5H9L4 462 aa10.74□□□□□ -0.69
DDB1-213ENST00000539332 SLC16A10Q8TF71 515 aa10.74□□□□□ -0.69
DDB1-213ENST00000539332 SEC31BQ9NQW1 1179 aa10.74□□□□□ -0.69
DDB1-213ENST00000539332 TLR7Q9NYK1 1049 aaKnown RBP10.74□□□□□ -0.69
DDB1-213ENST00000539332 PARP3Q9Y6F1 533 aa10.74□□□□□ -0.69
DDB1-213ENST00000539332 LRRC24Q50LG9 513 aa10.73□□□□□ -0.69
DDB1-213ENST00000539332 CNTROBQ8N137 903 aa10.73□□□□□ -0.69
DDB1-213ENST00000539332 KIF2CQ99661 725 aa10.73□□□□□ -0.69
DDB1-213ENST00000539332 ESYT1Q9BSJ8 1104 aa10.73□□□□□ -0.69
DDB1-213ENST00000539332 USP26Q9BXU7 913 aa10.73□□□□□ -0.69
DDB1-213ENST00000539332 PUS3Q9BZE2 481 aaKnown RBP10.73□□□□□ -0.69
DDB1-213ENST00000539332 DBNLQ9UJU6 430 aaKnown RBP10.73□□□□□ -0.69
DDB1-213ENST00000539332 RFX7Q2KHR2 1363 aa10.73□□□□□ -0.69
DDB1-213ENST00000539332 GOLGB1Q14789 3259 aaKnown RBP10.73□□□□□ -0.69
DDB1-213ENST00000539332 FRAT2O75474 233 aaPredicted RBP10.72□□□□□ -0.69
DDB1-213ENST00000539332 ATP5JP18859 108 aa10.72□□□□□ -0.69
DDB1-213ENST00000539332 CRY2Q49AN0 593 aa10.72□□□□□ -0.69
DDB1-213ENST00000539332 LDHAL6AQ6ZMR3 332 aa10.72□□□□□ -0.69
DDB1-213ENST00000539332 CCDC8Q9H0W5 538 aaPredicted RBP10.72□□□□□ -0.69
DDB1-213ENST00000539332 DOCK2Q92608 1830 aa10.72□□□□□ -0.69
DDB1-213ENST00000539332 MYO5AQ9Y4I1 1855 aaKnown RBP10.72□□□□□ -0.69
DDB1-213ENST00000539332 TRIM6-TRIM34B2RNG4 842 aa10.72□□□□□ -0.69
DDB1-213ENST00000539332 REC8O95072 547 aa10.72□□□□□ -0.69
DDB1-213ENST00000539332 R3HDM1Q15032 1099 aaKnown RBP10.72□□□□□ -0.69
DDB1-213ENST00000539332 SPRYD3Q8NCJ5 442 aa10.72□□□□□ -0.69
DDB1-213ENST00000539332 IL17RAQ96F46 866 aa10.72□□□□□ -0.69
DDB1-213ENST00000539332 CDC5LQ99459 802 aaKnown RBP10.72□□□□□ -0.69
DDB1-213ENST00000539332 BRIP1Q9BX63 1249 aa10.72□□□□□ -0.69
DDB1-213ENST00000539332 RIPOR2Q9Y4F9 1068 aa10.72□□□□□ -0.69
DDB1-213ENST00000539332 KLRG2A4D1S0 409 aaPredicted RBP10.71□□□□□ -0.69
DDB1-213ENST00000539332 TICAM2Q86XR7 235 aa10.71□□□□□ -0.69
DDB1-213ENST00000539332 VGLL2Q8N8G2 317 aa10.71□□□□□ -0.69
DDB1-213ENST00000539332 RILPL2Q969X0 211 aa10.71□□□□□ -0.69
DDB1-213ENST00000539332 EVI5LQ96CN4 794 aa10.71□□□□□ -0.69
DDB1-213ENST00000539332 MPHOSPH8Q99549 860 aa10.71□□□□□ -0.69
DDB1-213ENST00000539332 CNNM1Q9NRU3 951 aa10.71□□□□□ -0.69
DDB1-213ENST00000539332 COL11A2P13942 1736 aaPredicted RBP10.71□□□□□ -0.7
DDB1-213ENST00000539332 IGHMBP2P38935 993 aaKnown RBP10.7□□□□□ -0.7
DDB1-213ENST00000539332 DDX46Q7L014 1031 aaKnown RBP10.7□□□□□ -0.7
DDB1-213ENST00000539332 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.7□□□□□ -0.7
DDB1-213ENST00000539332 CELF1Q92879 486 aaKnown RBP10.7□□□□□ -0.7
DDB1-213ENST00000539332 DBNDD2Q9BQY9 259 aa10.7□□□□□ -0.7
DDB1-213ENST00000539332 ANKRD18AQ8IVF6 992 aa10.7□□□□□ -0.7
DDB1-213ENST00000539332 RPGRQ92834 1020 aaKnown RBP10.7□□□□□ -0.7
DDB1-213ENST00000539332 ARID3AQ99856 593 aa10.7□□□□□ -0.7
DDB1-213ENST00000539332 SNRKQ9NRH2 765 aa10.7□□□□□ -0.7
DDB1-213ENST00000539332 CEP126Q9P2H0 1117 aa10.7□□□□□ -0.7
DDB1-213ENST00000539332 SRCAPQ6ZRS2 3230 aa10.69□□□□□ -0.7
DDB1-213ENST00000539332 CACNA1SQ13698 1873 aa10.69□□□□□ -0.7
DDB1-213ENST00000539332 MYH13Q9UKX3 1938 aa10.69□□□□□ -0.7
DDB1-213ENST00000539332 KIF13BQ9NQT8 1826 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms