RNA–Protein interactions for RNA: ENST00000539318.5

NPIPB4-211, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 695 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-211	ENST00000539318	PNMA6E	A0A0J9YXQ4	647 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	CCDC93	Q567U6	631 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	ARHGAP27	Q6ZUM4	889 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	SIRT2	Q8IXJ6	389 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	RTKN2	Q8IZC4	609 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	PELP1	Q8IZL8	1130 aa	Known RBP	11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	KLHDC4	Q8TBB5	520 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	SSH3	Q8TE77	659 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	PSMD1	Q99460	953 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	PUS3	Q9BZE2	481 aa	Known RBP	11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	CHMP4B	Q9H444	224 aa	Known RBP	11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	C1orf115	Q9H7X2	142 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	COPRS	Q9NQ92	184 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	PODXL2	Q9NZ53	605 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	CHMP3	Q9Y3E7	222 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	SPEF2	Q9C093	1822 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	LTBP1	Q14766	1721 aa		11.18	□□□□□ -0.62
NPIPB4-211	ENST00000539318	WTIP	A6NIX2	430 aa	Predicted RBP	11.17	□□□□□ -0.62
NPIPB4-211	ENST00000539318	IGHMBP2	P38935	993 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB4-211	ENST00000539318	GPSM2	P81274	684 aa		11.17	□□□□□ -0.62
NPIPB4-211	ENST00000539318	CEP85	Q6P2H3	762 aa		11.17	□□□□□ -0.62
NPIPB4-211	ENST00000539318	LDHAL6A	Q6ZMR3	332 aa		11.17	□□□□□ -0.62
NPIPB4-211	ENST00000539318	ATG9A	Q7Z3C6	839 aa		11.17	□□□□□ -0.62
NPIPB4-211	ENST00000539318	MPND	Q8N594	471 aa		11.17	□□□□□ -0.62
NPIPB4-211	ENST00000539318	CRBN	Q96SW2	442 aa		11.17	□□□□□ -0.62
NPIPB4-211	ENST00000539318	POLL	Q9UGP5	575 aa		11.17	□□□□□ -0.62
NPIPB4-211	ENST00000539318	FBXO3	Q9UK99	471 aa		11.17	□□□□□ -0.62
NPIPB4-211	ENST00000539318	DICER1	Q9UPY3	1922 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB4-211	ENST00000539318	SRGAP3	O43295	1099 aa		11.16	□□□□□ -0.62
NPIPB4-211	ENST00000539318	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
NPIPB4-211	ENST00000539318	LRRC24	Q50LG9	513 aa		11.16	□□□□□ -0.62
NPIPB4-211	ENST00000539318	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPB4-211	ENST00000539318	MPHOSPH8	Q99549	860 aa		11.16	□□□□□ -0.62
NPIPB4-211	ENST00000539318	EYA2	O00167	538 aa		11.15	□□□□□ -0.62
NPIPB4-211	ENST00000539318	CHRND	Q07001	517 aa		11.15	□□□□□ -0.62
NPIPB4-211	ENST00000539318	TBC1D16	Q8TBP0	767 aa		11.15	□□□□□ -0.62
NPIPB4-211	ENST00000539318	VPS33B	Q9H267	617 aa		11.15	□□□□□ -0.62
NPIPB4-211	ENST00000539318	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.15	□□□□□ -0.62
NPIPB4-211	ENST00000539318	PA2G4	Q9UQ80	394 aa	Known RBP	11.15	□□□□□ -0.62
NPIPB4-211	ENST00000539318	NOP58	Q9Y2X3	529 aa	Known RBP	11.15	□□□□□ -0.62
NPIPB4-211	ENST00000539318	PCDHB15	Q9Y5E8	787 aa		11.15	□□□□□ -0.62
NPIPB4-211	ENST00000539318		A0A1B0GUL6	1792 aa		11.15	□□□□□ -0.62
NPIPB4-211	ENST00000539318	DUOX1	Q9NRD9	1551 aa		11.15	□□□□□ -0.62
NPIPB4-211	ENST00000539318	IRS2	Q9Y4H2	1338 aa		11.14	□□□□□ -0.63
NPIPB4-211	ENST00000539318	CIAO1	O76071	339 aa		11.14	□□□□□ -0.63
NPIPB4-211	ENST00000539318	RASSF7	Q02833	373 aa		11.14	□□□□□ -0.63
NPIPB4-211	ENST00000539318	DPP8	Q6V1X1	898 aa	Predicted RBP	11.14	□□□□□ -0.63
NPIPB4-211	ENST00000539318	VGLL2	Q8N8G2	317 aa		11.14	□□□□□ -0.63
NPIPB4-211	ENST00000539318	HELB	Q8NG08	1087 aa	Predicted RBP	11.14	□□□□□ -0.63
NPIPB4-211	ENST00000539318	EXOC6	Q8TAG9	804 aa		11.14	□□□□□ -0.63
NPIPB4-211	ENST00000539318	ANKRD2	Q9GZV1	360 aa		11.14	□□□□□ -0.63
NPIPB4-211	ENST00000539318	TAOK3	Q9H2K8	898 aa		11.14	□□□□□ -0.63
NPIPB4-211	ENST00000539318	LEMD3	Q9Y2U8	911 aa		11.14	□□□□□ -0.63
NPIPB4-211	ENST00000539318	XDH	P47989	1333 aa		11.13	□□□□□ -0.63
NPIPB4-211	ENST00000539318	SNAP23	O00161	211 aa		11.13	□□□□□ -0.63
NPIPB4-211	ENST00000539318	TAF5L	O75529	589 aa		11.13	□□□□□ -0.63
NPIPB4-211	ENST00000539318	LMNB1	P20700	586 aa		11.13	□□□□□ -0.63
NPIPB4-211	ENST00000539318	ATP2B4	P23634	1241 aa		11.13	□□□□□ -0.63
NPIPB4-211	ENST00000539318	AAMP	Q13685	434 aa		11.13	□□□□□ -0.63
NPIPB4-211	ENST00000539318	TAF7L	Q5H9L4	462 aa		11.13	□□□□□ -0.63
NPIPB4-211	ENST00000539318	TMX4	Q9H1E5	349 aa	Predicted RBP	11.13	□□□□□ -0.63
NPIPB4-211	ENST00000539318	CNNM1	Q9NRU3	951 aa		11.13	□□□□□ -0.63
NPIPB4-211	ENST00000539318	ANKIB1	Q9P2G1	1089 aa		11.13	□□□□□ -0.63
NPIPB4-211	ENST00000539318	MROH5	Q6ZUA9	1318 aa		11.12	□□□□□ -0.63
NPIPB4-211	ENST00000539318	SASH1	O94885	1247 aa		11.12	□□□□□ -0.63
NPIPB4-211	ENST00000539318	PDE8B	O95263	885 aa		11.12	□□□□□ -0.63
NPIPB4-211	ENST00000539318	FGFR2	P21802	821 aa		11.12	□□□□□ -0.63
NPIPB4-211	ENST00000539318	KIAA2012	Q0VF49	1180 aa		11.12	□□□□□ -0.63
NPIPB4-211	ENST00000539318	C9orf131	Q5VYM1	1079 aa		11.12	□□□□□ -0.63
NPIPB4-211	ENST00000539318	C15orf52	Q6ZUT6	534 aa	Known RBP	11.12	□□□□□ -0.63
NPIPB4-211	ENST00000539318	TXNRD3	Q86VQ6	643 aa		11.12	□□□□□ -0.63
NPIPB4-211	ENST00000539318	SUPT20H	Q8NEM7	779 aa		11.12	□□□□□ -0.63
NPIPB4-211	ENST00000539318	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.12	□□□□□ -0.63
NPIPB4-211	ENST00000539318	GGA1	Q9UJY5	639 aa		11.12	□□□□□ -0.63
NPIPB4-211	ENST00000539318	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.12	□□□□□ -0.63
NPIPB4-211	ENST00000539318	ZNF804B	A4D1E1	1349 aa		11.11	□□□□□ -0.63
NPIPB4-211	ENST00000539318	COL4A5	P29400	1685 aa		11.11	□□□□□ -0.63
NPIPB4-211	ENST00000539318	IL15	P40933	162 aa	Predicted RBP	11.11	□□□□□ -0.63
NPIPB4-211	ENST00000539318	IARS	P41252	1262 aa	Known RBP	11.11	□□□□□ -0.63
NPIPB4-211	ENST00000539318	UBE4A	Q14139	1066 aa		11.11	□□□□□ -0.63
NPIPB4-211	ENST00000539318	WASHC4	Q2M389	1173 aa		11.11	□□□□□ -0.63
NPIPB4-211	ENST00000539318	SIL1	Q9H173	461 aa		11.11	□□□□□ -0.63
NPIPB4-211	ENST00000539318	C6orf229	H3BNL8	230 aa		11.1	□□□□□ -0.63
NPIPB4-211	ENST00000539318	FZD9	O00144	591 aa		11.1	□□□□□ -0.63
NPIPB4-211	ENST00000539318	SURF6	O75683	361 aa	Known RBP	11.1	□□□□□ -0.63
NPIPB4-211	ENST00000539318	UFL1	O94874	794 aa		11.1	□□□□□ -0.63
NPIPB4-211	ENST00000539318	CENPB	P07199	599 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPB4-211	ENST00000539318	IRX6	P78412	446 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPB4-211	ENST00000539318	AOC3	Q16853	763 aa		11.1	□□□□□ -0.63
NPIPB4-211	ENST00000539318	METTL24	Q5JXM2	366 aa		11.1	□□□□□ -0.63
NPIPB4-211	ENST00000539318	GPR101	Q96P66	508 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPB4-211	ENST00000539318	DCTPP1	Q9H773	170 aa		11.1	□□□□□ -0.63
NPIPB4-211	ENST00000539318	CEP126	Q9P2H0	1117 aa		11.1	□□□□□ -0.63
NPIPB4-211	ENST00000539318	SCN9A	Q15858	1988 aa		11.1	□□□□□ -0.63
NPIPB4-211	ENST00000539318	HMMR	O75330	724 aa		11.09	□□□□□ -0.63
NPIPB4-211	ENST00000539318	KLRK1	P26718	216 aa		11.09	□□□□□ -0.63
NPIPB4-211	ENST00000539318	TFCP2	Q12800	502 aa		11.09	□□□□□ -0.63
NPIPB4-211	ENST00000539318	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
NPIPB4-211	ENST00000539318	EYA3	Q99504	573 aa		11.09	□□□□□ -0.63
NPIPB4-211	ENST00000539318	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms