RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 SCRN1Q12765 414 aa8.26□□□□□ -1.09
PROM1-219ENST00000539194 RGS22Q8NE09 1264 aa8.26□□□□□ -1.09
PROM1-219ENST00000539194 ENGASEQ8NFI3 743 aa8.26□□□□□ -1.09
PROM1-219ENST00000539194 ANP32BQ92688 251 aaKnown RBP8.26□□□□□ -1.09
PROM1-219ENST00000539194 PFKFB2O60825 505 aa8.26□□□□□ -1.09
PROM1-219ENST00000539194 HMGN5P82970 282 aaKnown RBP8.26□□□□□ -1.09
PROM1-219ENST00000539194 IFNL2Q8IZJ0 200 aa8.26□□□□□ -1.09
PROM1-219ENST00000539194 G3BP1Q13283 466 aaKnown RBP eCLIP8.26□□□□□ -1.09
PROM1-219ENST00000539194 IQCB1Q15051 598 aa8.26□□□□□ -1.09
PROM1-219ENST00000539194 KBTBD3Q8NAB2 608 aa8.26□□□□□ -1.09
PROM1-219ENST00000539194 TDRD7Q8NHU6 1098 aaKnown RBP8.26□□□□□ -1.09
PROM1-219ENST00000539194 SEC62Q99442 399 aaKnown RBP8.26□□□□□ -1.09
PROM1-219ENST00000539194 MYD88Q99836 296 aa8.26□□□□□ -1.09
PROM1-219ENST00000539194 LLPHQ9BRT6 129 aaKnown RBP8.26□□□□□ -1.09
PROM1-219ENST00000539194 DSCC1Q9BVC3 393 aa8.26□□□□□ -1.09
PROM1-219ENST00000539194 ZNF831Q5JPB2 1677 aa8.26□□□□□ -1.09
PROM1-219ENST00000539194 A0A0G2JLW4 131 aa8.25□□□□□ -1.09
PROM1-219ENST00000539194 CTIFO43310 598 aaKnown RBP8.25□□□□□ -1.09
PROM1-219ENST00000539194 NOLC1Q14978 699 aaKnown RBP eCLIP8.25□□□□□ -1.09
PROM1-219ENST00000539194 ZMYM1Q5SVZ6 1142 aa8.25□□□□□ -1.09
PROM1-219ENST00000539194 NSUN7Q8NE18 718 aaKnown RBP8.25□□□□□ -1.09
PROM1-219ENST00000539194 DBNDD2Q9BQY9 259 aa8.25□□□□□ -1.09
PROM1-219ENST00000539194 CLSTN2Q9H4D0 955 aa8.25□□□□□ -1.09
PROM1-219ENST00000539194 KCND1Q9NSA2 647 aa8.25□□□□□ -1.09
PROM1-219ENST00000539194 FIBPO43427 364 aa8.25□□□□□ -1.09
PROM1-219ENST00000539194 CIAO1O76071 339 aa8.25□□□□□ -1.09
PROM1-219ENST00000539194 ZKSCAN1P17029 563 aaPredicted RBP8.25□□□□□ -1.09
PROM1-219ENST00000539194 FAM173BQ6P4H8 233 aa8.25□□□□□ -1.09
PROM1-219ENST00000539194 COL16A1Q07092 1604 aaPredicted RBP8.25□□□□□ -1.09
PROM1-219ENST00000539194 JAK2O60674 1132 aa8.25□□□□□ -1.09
PROM1-219ENST00000539194 HSP90AA2PQ14568 343 aaPredicted RBP8.25□□□□□ -1.09
PROM1-219ENST00000539194 FOXD4L6Q3SYB3 417 aaPredicted RBP8.25□□□□□ -1.09
PROM1-219ENST00000539194 BLOC1S2Q6QNY1 142 aa8.25□□□□□ -1.09
PROM1-219ENST00000539194 FOXD4L3Q6VB84 417 aaPredicted RBP8.25□□□□□ -1.09
PROM1-219ENST00000539194 RCOR1Q9UKL0 485 aa8.25□□□□□ -1.09
PROM1-219ENST00000539194 COL4A1P02462 1669 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 KIAA2012Q0VF49 1180 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 MCMDC2Q4G0Z9 681 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 LARP1BQ659C4 914 aaKnown RBP8.24□□□□□ -1.09
PROM1-219ENST00000539194 FAM200AQ8TCP9 573 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 DDX54Q8TDD1 881 aaKnown RBP8.24□□□□□ -1.09
PROM1-219ENST00000539194 HELLSQ9NRZ9 838 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 PYCARDQ9ULZ3 195 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 R3HCC1Q9Y3T6 440 aaKnown RBP8.24□□□□□ -1.09
PROM1-219ENST00000539194 ABCC12Q96J65 1359 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 DISP2A7MBM2 1401 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 NR1I2O75469 434 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 FDPSP14324 419 aaKnown RBP8.24□□□□□ -1.09
PROM1-219ENST00000539194 KRT32Q14532 448 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 SARM1Q6SZW1 724 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 PRIMPOLQ96LW4 560 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 TTC12Q9H892 705 aaPredicted RBP8.24□□□□□ -1.09
PROM1-219ENST00000539194 COL5A3P25940 1745 aaPredicted RBP8.24□□□□□ -1.09
PROM1-219ENST00000539194 KIAA1551Q9HCM1 1747 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 PDCP20941 246 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 CDC25BP30305 580 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 TYRO3Q06418 890 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 NAA16Q6N069 864 aaPredicted RBP8.24□□□□□ -1.09
PROM1-219ENST00000539194 CCDC129Q6ZRS4 1044 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 RIC3Q7Z5B4 369 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 TCEANC2Q96MN5 208 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 ZNF830Q96NB3 372 aaPredicted RBP8.24□□□□□ -1.09
PROM1-219ENST00000539194 NEK1Q96PY6 1258 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 PLA2G12BQ9BX93 195 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 SCAND2PQ9GZW5 306 aaPredicted RBP8.24□□□□□ -1.09
PROM1-219ENST00000539194 NDUFB9Q9Y6M9 179 aa8.24□□□□□ -1.09
PROM1-219ENST00000539194 UQCRHLA0A096LP55 91 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 UQCRHP07919 91 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 KRT85P78386 507 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 FMNL2Q96PY5 1086 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 FSD1Q9BTV5 496 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 ISCA1Q9BUE6 129 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 SIL1Q9H173 461 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 U3KPZ7 1027 aaPredicted RBP8.23□□□□□ -1.09
PROM1-219ENST00000539194 MYL6BP14649 208 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 AIMP1Q12904 312 aaKnown RBP8.23□□□□□ -1.09
PROM1-219ENST00000539194 SLFNL1Q499Z3 407 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 RNF20Q5VTR2 975 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 C14orf37Q86TY3 774 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 GOLPH3LQ9H4A5 285 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 CBX8Q9HC52 389 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 BCL9LQ86UU0 1499 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 Q6ZUG5 572 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 NBPF3Q9H094 633 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 MAST3O60307 1309 aa8.23□□□□□ -1.09
PROM1-219ENST00000539194 CSF1RP07333 972 aa8.22□□□□□ -1.09
PROM1-219ENST00000539194 TRIM28Q13263 835 aaKnown RBP8.22□□□□□ -1.09
PROM1-219ENST00000539194 OS9Q13438 667 aaPredicted RBP8.22□□□□□ -1.09
PROM1-219ENST00000539194 UBE3BQ7Z3V4 1068 aa8.22□□□□□ -1.09
PROM1-219ENST00000539194 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.22□□□□□ -1.09
PROM1-219ENST00000539194 NKX2-3Q8TAU0 364 aa8.22□□□□□ -1.09
PROM1-219ENST00000539194 ANKRD7Q92527 254 aa8.22□□□□□ -1.09
PROM1-219ENST00000539194 NRAPQ86VF7 1730 aa8.22□□□□□ -1.09
PROM1-219ENST00000539194 NID2Q14112 1375 aa8.22□□□□□ -1.09
PROM1-219ENST00000539194 HSPD1P10809 573 aaKnown RBP8.22□□□□□ -1.09
PROM1-219ENST00000539194 TATP17735 454 aaPredicted RBP8.22□□□□□ -1.09
PROM1-219ENST00000539194 JARID2Q92833 1246 aaPredicted RBP8.22□□□□□ -1.09
PROM1-219ENST00000539194 DDX17Q92841 729 aaKnown RBP8.22□□□□□ -1.09
PROM1-219ENST00000539194 ZSCAN16Q9H4T2 348 aaPredicted RBP8.22□□□□□ -1.09
PROM1-219ENST00000539194 DDX19AQ9NUU7 478 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms