RNA–Protein interactions for RNA: ENST00000539091.5

RAP1B-220, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-220ENST00000539091 SRGAP3O43295 1099 aa25.91■■□□□ 1.74
RAP1B-220ENST00000539091 GPSM2P81274 684 aa25.9■■□□□ 1.74
RAP1B-220ENST00000539091 LARGE2Q8N3Y3 721 aa25.9■■□□□ 1.74
RAP1B-220ENST00000539091 MINPP1Q9UNW1 487 aa25.9■■□□□ 1.74
RAP1B-220ENST00000539091 CHD4Q14839 1912 aa25.9■■□□□ 1.74
RAP1B-220ENST00000539091 PPIP5K2O43314 1243 aa25.89■■□□□ 1.74
RAP1B-220ENST00000539091 UFL1O94874 794 aa25.89■■□□□ 1.74
RAP1B-220ENST00000539091 ATP2B4P23634 1241 aa25.89■■□□□ 1.74
RAP1B-220ENST00000539091 YY1P25490 414 aa25.89■■□□□ 1.74
RAP1B-220ENST00000539091 IARSP41252 1262 aaKnown RBP25.89■■□□□ 1.74
RAP1B-220ENST00000539091 C20orf194Q5TEA3 1177 aa25.89■■□□□ 1.74
RAP1B-220ENST00000539091 VPS33BQ9H267 617 aa25.89■■□□□ 1.74
RAP1B-220ENST00000539091 FER1L6Q2WGJ9 1857 aa25.88■■□□□ 1.73
RAP1B-220ENST00000539091 C1orf115Q9H7X2 142 aa25.88■■□□□ 1.73
RAP1B-220ENST00000539091 SUPT16HQ9Y5B9 1047 aaKnown RBP25.88■■□□□ 1.73
RAP1B-220ENST00000539091 CHRNDQ07001 517 aa25.87■■□□□ 1.73
RAP1B-220ENST00000539091 WASHC4Q2M389 1173 aa25.87■■□□□ 1.73
RAP1B-220ENST00000539091 ZC3H12CQ9C0D7 883 aaKnown RBP25.87■■□□□ 1.73
RAP1B-220ENST00000539091 PODXL2Q9NZ53 605 aa25.87■■□□□ 1.73
RAP1B-220ENST00000539091 SPEF2Q9C093 1822 aa25.86■■□□□ 1.73
RAP1B-220ENST00000539091 NIM1KQ8IY84 436 aa25.86■■□□□ 1.73
RAP1B-220ENST00000539091 RTFDC1Q9BY42 306 aaPredicted RBP25.86■■□□□ 1.73
RAP1B-220ENST00000539091 MROH5Q6ZUA9 1318 aa25.86■■□□□ 1.73
RAP1B-220ENST00000539091 METTL24Q5JXM2 366 aa25.85■■□□□ 1.73
RAP1B-220ENST00000539091 TBC1D16Q8TBP0 767 aa25.85■■□□□ 1.73
RAP1B-220ENST00000539091 SIL1Q9H173 461 aa25.85■■□□□ 1.73
RAP1B-220ENST00000539091 LEMD3Q9Y2U8 911 aa25.85■■□□□ 1.73
RAP1B-220ENST00000539091 HMMRO75330 724 aa25.84■■□□□ 1.73
RAP1B-220ENST00000539091 CENPBP07199 599 aaPredicted RBP25.84■■□□□ 1.73
RAP1B-220ENST00000539091 MTX1Q13505 466 aa25.84■■□□□ 1.73
RAP1B-220ENST00000539091 AOC3Q16853 763 aa25.84■■□□□ 1.73
RAP1B-220ENST00000539091 FBXO3Q9UK99 471 aa25.84■■□□□ 1.73
RAP1B-220ENST00000539091 RIMBP2O15034 1052 aa25.83■■□□□ 1.73
RAP1B-220ENST00000539091 ATP8B2P98198 1209 aa25.83■■□□□ 1.73
RAP1B-220ENST00000539091 OS9Q13438 667 aaPredicted RBP25.83■■□□□ 1.73
RAP1B-220ENST00000539091 DPY19L2Q6NUT2 758 aa25.83■■□□□ 1.73
RAP1B-220ENST00000539091 HELBQ8NG08 1087 aaPredicted RBP25.83■■□□□ 1.73
RAP1B-220ENST00000539091 KLHDC4Q8TBB5 520 aa25.83■■□□□ 1.73
RAP1B-220ENST00000539091 ZC3H4Q9UPT8 1303 aaKnown RBP25.83■■□□□ 1.73
RAP1B-220ENST00000539091 EYA2O00167 538 aa25.82■■□□□ 1.72
RAP1B-220ENST00000539091 EIF6P56537 245 aaKnown RBP25.82■■□□□ 1.72
RAP1B-220ENST00000539091 G3BP1Q13283 466 aaKnown RBP eCLIP25.82■■□□□ 1.72
RAP1B-220ENST00000539091 SLC51AQ86UW1 340 aa25.82■■□□□ 1.72
RAP1B-220ENST00000539091 POLLQ9UGP5 575 aa25.82■■□□□ 1.72
RAP1B-220ENST00000539091 LRRC37AA6NMS7 1700 aa25.82■■□□□ 1.72
RAP1B-220ENST00000539091 PTPN12Q05209 780 aaKnown RBP25.81■■□□□ 1.72
RAP1B-220ENST00000539091 KIAA2012Q0VF49 1180 aa25.81■■□□□ 1.72
RAP1B-220ENST00000539091 PUS3Q9BZE2 481 aaKnown RBP25.81■■□□□ 1.72
RAP1B-220ENST00000539091 ZBTB40Q9NUA8 1239 aa25.81■■□□□ 1.72
RAP1B-220ENST00000539091 CEP126Q9P2H0 1117 aa25.81■■□□□ 1.72
RAP1B-220ENST00000539091 ZNF804BA4D1E1 1349 aa25.81■■□□□ 1.72
RAP1B-220ENST00000539091 TAF5LO75529 589 aa25.8■■□□□ 1.72
RAP1B-220ENST00000539091 LRRC24Q50LG9 513 aa25.8■■□□□ 1.72
RAP1B-220ENST00000539091 RPAP2Q8IXW5 612 aaPredicted RBP25.8■■□□□ 1.72
RAP1B-220ENST00000539091 COPRSQ9NQ92 184 aa25.8■■□□□ 1.72
RAP1B-220ENST00000539091 CCDC88AQ3V6T2 1871 aa25.8■■□□□ 1.72
RAP1B-220ENST00000539091 COL4A1P02462 1669 aa25.8■■□□□ 1.72
RAP1B-220ENST00000539091 SBF1O95248 1867 aa25.79■■□□□ 1.72
RAP1B-220ENST00000539091 CIAO1O76071 339 aa25.79■■□□□ 1.72
RAP1B-220ENST00000539091 IL15P40933 162 aaPredicted RBP25.79■■□□□ 1.72
RAP1B-220ENST00000539091 RFX5P48382 616 aaPredicted RBP25.79■■□□□ 1.72
RAP1B-220ENST00000539091 PA2G4Q9UQ80 394 aaKnown RBP25.79■■□□□ 1.72
RAP1B-220ENST00000539091 RIPOR2Q9Y4F9 1068 aa25.79■■□□□ 1.72
RAP1B-220ENST00000539091 GOLGB1Q14789 3259 aaKnown RBP25.78■■□□□ 1.72
RAP1B-220ENST00000539091 CEP85Q6P2H3 762 aa25.78■■□□□ 1.72
RAP1B-220ENST00000539091 PNMA6EA0A0J9YXQ4 647 aa25.77■■□□□ 1.72
RAP1B-220ENST00000539091 CRBNQ96SW2 442 aa25.77■■□□□ 1.72
RAP1B-220ENST00000539091 KDM2BQ8NHM5 1336 aa25.77■■□□□ 1.72
RAP1B-220ENST00000539091 SNED1Q8TER0 1413 aa25.77■■□□□ 1.72
RAP1B-220ENST00000539091 SURF6O75683 361 aaKnown RBP25.76■■□□□ 1.71
RAP1B-220ENST00000539091 UBE4AQ14139 1066 aa25.76■■□□□ 1.71
RAP1B-220ENST00000539091 SSH3Q8TE77 659 aa25.76■■□□□ 1.71
RAP1B-220ENST00000539091 GPR101Q96P66 508 aaPredicted RBP25.76■■□□□ 1.71
RAP1B-220ENST00000539091 ZNRF3Q9ULT6 936 aa25.76■■□□□ 1.71
RAP1B-220ENST00000539091 IFIT1P09914 478 aaKnown RBP25.75■■□□□ 1.71
RAP1B-220ENST00000539091 PRELPP51888 382 aa25.75■■□□□ 1.71
RAP1B-220ENST00000539091 HSP90AB4PQ58FF6 505 aa25.75■■□□□ 1.71
RAP1B-220ENST00000539091 ZNF804AQ7Z570 1209 aa25.75■■□□□ 1.71
RAP1B-220ENST00000539091 VPS37DQ86XT2 251 aa25.75■■□□□ 1.71
RAP1B-220ENST00000539091 MED23Q9ULK4 1368 aa25.74■■□□□ 1.71
RAP1B-220ENST00000539091 PDE8BO95263 885 aa25.74■■□□□ 1.71
RAP1B-220ENST00000539091 AAMPQ13685 434 aa25.74■■□□□ 1.71
RAP1B-220ENST00000539091 PUM3Q15397 648 aaKnown RBP25.74■■□□□ 1.71
RAP1B-220ENST00000539091 DOK7Q18PE1 504 aa25.74■■□□□ 1.71
RAP1B-220ENST00000539091 ZNF526Q8TF50 670 aaPredicted RBP25.74■■□□□ 1.71
RAP1B-220ENST00000539091 DBNDD1Q9H9R9 158 aa25.74■■□□□ 1.71
RAP1B-220ENST00000539091 DICER1Q9UPY3 1922 aaKnown RBP25.73■■□□□ 1.71
RAP1B-220ENST00000539091 SLC5A1P13866 664 aa25.73■■□□□ 1.71
RAP1B-220ENST00000539091 POLA2Q14181 598 aa25.73■■□□□ 1.71
RAP1B-220ENST00000539091 TNIP1Q15025 636 aa25.73■■□□□ 1.71
RAP1B-220ENST00000539091 CAVIN4Q5BKX8 364 aa25.73■■□□□ 1.71
RAP1B-220ENST00000539091 AKAP2Q9Y2D5 859 aa25.73■■□□□ 1.71
RAP1B-220ENST00000539091 ECE2O60344 883 aa25.72■■□□□ 1.71
RAP1B-220ENST00000539091 GJA3Q9Y6H8 435 aa25.72■■□□□ 1.71
RAP1B-220ENST00000539091 ATG9AQ7Z3C6 839 aa25.71■■□□□ 1.71
RAP1B-220ENST00000539091 COA1Q9GZY4 146 aa25.71■■□□□ 1.71
RAP1B-220ENST00000539091 GPBP1L1Q9HC44 474 aaPredicted RBP25.71■■□□□ 1.71
RAP1B-220ENST00000539091 TIAM2Q8IVF5 1701 aa25.71■■□□□ 1.71
RAP1B-220ENST00000539091 DUOX1Q9NRD9 1551 aa25.7■■□□□ 1.71
RAP1B-220ENST00000539091 GLTPD2A6NH11 291 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms