RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 TSR2Q969E8 191 aaKnown RBP16.14■□□□□ 0.17
VAMP1-206ENST00000538970 EYA3Q99504 573 aa16.14■□□□□ 0.17
VAMP1-206ENST00000538970 CHMP4AQ9BY43 222 aa16.14■□□□□ 0.17
VAMP1-206ENST00000538970 GLIS2Q9BZE0 524 aaPredicted RBP16.14■□□□□ 0.17
VAMP1-206ENST00000538970 SEC31BQ9NQW1 1179 aa16.14■□□□□ 0.17
VAMP1-206ENST00000538970 CWC25Q9NXE8 425 aaPredicted RBP16.14■□□□□ 0.17
VAMP1-206ENST00000538970 CNOT7Q9UIV1 285 aaKnown RBP16.14■□□□□ 0.17
VAMP1-206ENST00000538970 ZBTB12Q9Y330 459 aaPredicted RBP16.14■□□□□ 0.17
VAMP1-206ENST00000538970 RTL9Q8NET4 1388 aa16.13■□□□□ 0.17
VAMP1-206ENST00000538970 CASP8AP2Q9UKL3 1982 aa16.13■□□□□ 0.17
VAMP1-206ENST00000538970 PSMD14O00487 310 aa16.13■□□□□ 0.17
VAMP1-206ENST00000538970 ECE2O60344 883 aa16.13■□□□□ 0.17
VAMP1-206ENST00000538970 CCDC27Q2M243 656 aa16.13■□□□□ 0.17
VAMP1-206ENST00000538970 DPF2Q92785 391 aa16.13■□□□□ 0.17
VAMP1-206ENST00000538970 PODXL2Q9NZ53 605 aa16.13■□□□□ 0.17
VAMP1-206ENST00000538970 H7C1D1 291 aa16.12■□□□□ 0.17
VAMP1-206ENST00000538970 PDE8AO60658 829 aa16.12■□□□□ 0.17
VAMP1-206ENST00000538970 CELF2O95319 508 aaKnown RBP16.12■□□□□ 0.17
VAMP1-206ENST00000538970 CCDC152Q4G0S7 254 aa16.12■□□□□ 0.17
VAMP1-206ENST00000538970 JARID2Q92833 1246 aaPredicted RBP16.12■□□□□ 0.17
VAMP1-206ENST00000538970 MAP3K2Q9Y2U5 619 aa16.12■□□□□ 0.17
VAMP1-206ENST00000538970 RPS12P25398 132 aaKnown RBP16.11■□□□□ 0.17
VAMP1-206ENST00000538970 DOK7Q18PE1 504 aa16.11■□□□□ 0.17
VAMP1-206ENST00000538970 KSR2Q6VAB6 950 aa16.11■□□□□ 0.17
VAMP1-206ENST00000538970 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
VAMP1-206ENST00000538970 SAPCD2Q86UD0 394 aa16.11■□□□□ 0.17
VAMP1-206ENST00000538970 PI4KAP2A4QPH2 592 aa16.1■□□□□ 0.17
VAMP1-206ENST00000538970 UFL1O94874 794 aa16.1■□□□□ 0.17
VAMP1-206ENST00000538970 IGKV5-2P06315 115 aa16.1■□□□□ 0.17
VAMP1-206ENST00000538970 MAP2K2P36507 400 aa16.1■□□□□ 0.17
VAMP1-206ENST00000538970 SOX10P56693 466 aa16.1■□□□□ 0.17
VAMP1-206ENST00000538970 SAMD7Q7Z3H4 446 aa16.1■□□□□ 0.17
VAMP1-206ENST00000538970 WWC1Q8IX03 1113 aa16.1■□□□□ 0.17
VAMP1-206ENST00000538970 PI4KAP1Q8N8J0 262 aa16.1■□□□□ 0.17
VAMP1-206ENST00000538970 CCDC85AQ96PX6 553 aaPredicted RBP16.1■□□□□ 0.17
VAMP1-206ENST00000538970 ZC3H12CQ9C0D7 883 aaKnown RBP16.1■□□□□ 0.17
VAMP1-206ENST00000538970 KCNQ5Q9NR82 932 aa16.1■□□□□ 0.17
VAMP1-206ENST00000538970 EGFRP00533 1210 aa16.09■□□□□ 0.17
VAMP1-206ENST00000538970 TWISTNBQ3B726 338 aaPredicted RBP16.09■□□□□ 0.17
VAMP1-206ENST00000538970 HHIPL1Q96JK4 782 aa16.09■□□□□ 0.17
VAMP1-206ENST00000538970 STK31Q9BXU1 1019 aa16.09■□□□□ 0.17
VAMP1-206ENST00000538970 ZNF408Q9H9D4 720 aa16.09■□□□□ 0.17
VAMP1-206ENST00000538970 ANKIB1Q9P2G1 1089 aa16.09■□□□□ 0.17
VAMP1-206ENST00000538970 GGA1Q9UJY5 639 aa16.09■□□□□ 0.17
VAMP1-206ENST00000538970 ZNF609O15014 1411 aa16.09■□□□□ 0.17
VAMP1-206ENST00000538970 CTSWP56202 376 aa16.08■□□□□ 0.16
VAMP1-206ENST00000538970 TBC1D10BQ4KMP7 808 aaPredicted RBP16.08■□□□□ 0.16
VAMP1-206ENST00000538970 ANKRD18AQ8IVF6 992 aa16.08■□□□□ 0.16
VAMP1-206ENST00000538970 ZIC5Q96T25 663 aa16.08■□□□□ 0.16
VAMP1-206ENST00000538970 XDHP47989 1333 aa16.08■□□□□ 0.16
VAMP1-206ENST00000538970 IL16Q14005 1332 aa16.08■□□□□ 0.16
VAMP1-206ENST00000538970 SCN9AQ15858 1988 aa16.07■□□□□ 0.16
VAMP1-206ENST00000538970 VIL1P09327 827 aaKnown RBP16.07■□□□□ 0.16
VAMP1-206ENST00000538970 NEXNQ0ZGT2 675 aa16.07■□□□□ 0.16
VAMP1-206ENST00000538970 CWF19L2Q2TBE0 894 aaKnown RBP16.07■□□□□ 0.16
VAMP1-206ENST00000538970 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
VAMP1-206ENST00000538970 G2E3Q7L622 706 aa16.07■□□□□ 0.16
VAMP1-206ENST00000538970 USP48Q86UV5 1035 aa16.07■□□□□ 0.16
VAMP1-206ENST00000538970 PDE4DIPQ5VU43 2346 aa16.06■□□□□ 0.16
VAMP1-206ENST00000538970 NEURL1BA8MQ27 555 aa16.06■□□□□ 0.16
VAMP1-206ENST00000538970 CA12O43570 354 aa16.06■□□□□ 0.16
VAMP1-206ENST00000538970 BRPF1P55201 1214 aaPredicted RBP16.06■□□□□ 0.16
VAMP1-206ENST00000538970 DLK2Q6UY11 383 aa16.06■□□□□ 0.16
VAMP1-206ENST00000538970 TTLL11Q8NHH1 800 aa16.06■□□□□ 0.16
VAMP1-206ENST00000538970 CDC5LQ99459 802 aaKnown RBP16.06■□□□□ 0.16
VAMP1-206ENST00000538970 FANCIQ9NVI1 1328 aa16.05■□□□□ 0.16
VAMP1-206ENST00000538970 G3V3G9 751 aa16.05■□□□□ 0.16
VAMP1-206ENST00000538970 SLC4A2P04920 1241 aa16.05■□□□□ 0.16
VAMP1-206ENST00000538970 KIF4BQ2VIQ3 1234 aa16.05■□□□□ 0.16
VAMP1-206ENST00000538970 DCAF8Q5TAQ9 597 aa16.05■□□□□ 0.16
VAMP1-206ENST00000538970 KRT26Q7Z3Y9 468 aa16.05■□□□□ 0.16
VAMP1-206ENST00000538970 GREM2Q9H772 168 aa16.05■□□□□ 0.16
VAMP1-206ENST00000538970 MRS2Q9HD23 443 aa16.05■□□□□ 0.16
VAMP1-206ENST00000538970 PSME4Q14997 1843 aa16.04■□□□□ 0.16
VAMP1-206ENST00000538970 ADM5C9JUS6 153 aa16.04■□□□□ 0.16
VAMP1-206ENST00000538970 ATP2B4P23634 1241 aa16.04■□□□□ 0.16
VAMP1-206ENST00000538970 RBM26Q5T8P6 1007 aaKnown RBP16.04■□□□□ 0.16
VAMP1-206ENST00000538970 PRPF38BQ5VTL8 546 aaKnown RBP16.04■□□□□ 0.16
VAMP1-206ENST00000538970 MED23Q9ULK4 1368 aa16.03■□□□□ 0.16
VAMP1-206ENST00000538970 H7C1W4 665 aa16.03■□□□□ 0.16
VAMP1-206ENST00000538970 ZNF280AP59817 542 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-206ENST00000538970 FLIIQ13045 1269 aa16.03■□□□□ 0.16
VAMP1-206ENST00000538970 RSBN1LQ6PCB5 846 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-206ENST00000538970 UBE3BQ7Z3V4 1068 aa16.03■□□□□ 0.16
VAMP1-206ENST00000538970 AGBL3Q8NEM8 1001 aa16.03■□□□□ 0.16
VAMP1-206ENST00000538970 DCPSQ96C86 337 aaKnown RBP16.03■□□□□ 0.16
VAMP1-206ENST00000538970 BSDC1Q9NW68 430 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-206ENST00000538970 GGA3Q9NZ52 723 aa16.03■□□□□ 0.16
VAMP1-206ENST00000538970 MYH3P11055 1940 aa16.03■□□□□ 0.16
VAMP1-206ENST00000538970 HUNKP57058 714 aa16.02■□□□□ 0.16
VAMP1-206ENST00000538970 GCKRQ14397 625 aa16.02■□□□□ 0.16
VAMP1-206ENST00000538970 PODNQ7Z5L7 613 aa16.02■□□□□ 0.16
VAMP1-206ENST00000538970 MINPP1Q9UNW1 487 aa16.02■□□□□ 0.16
VAMP1-206ENST00000538970 SPEF2Q9C093 1822 aa16.02■□□□□ 0.16
VAMP1-206ENST00000538970 ASTN2O75129 1339 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-206ENST00000538970 WTIPA6NIX2 430 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-206ENST00000538970 GMLQ99445 158 aa16.01■□□□□ 0.15
VAMP1-206ENST00000538970 PLA2G12BQ9BX93 195 aa16.01■□□□□ 0.15
VAMP1-206ENST00000538970 GBA2Q9HCG7 927 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-206ENST00000538970 USP17L3A6NCW0 530 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms