RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 CHPF2Q9P2E5 772 aa16.18■□□□□ 0.18
PLXNB3-209ENST00000538966 PCDHB15Q9Y5E8 787 aa16.18■□□□□ 0.18
PLXNB3-209ENST00000538966 IKBKGQ9Y6K9 419 aa16.18■□□□□ 0.18
PLXNB3-209ENST00000538966 CKAP4Q07065 602 aaKnown RBP16.18■□□□□ 0.18
PLXNB3-209ENST00000538966 CAPZA3Q96KX2 299 aa16.18■□□□□ 0.18
PLXNB3-209ENST00000538966 HMGB2P26583 209 aaKnown RBP16.18■□□□□ 0.18
PLXNB3-209ENST00000538966 ESYT1Q9BSJ8 1104 aa16.18■□□□□ 0.18
PLXNB3-209ENST00000538966 IFIT1BQ5T764 474 aaKnown RBP16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 AMOTL2Q9Y2J4 779 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 GJC1P36383 396 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 CCDC155Q8N6L0 562 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 MRPS27Q92552 414 aaKnown RBP16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 TBC1D5Q92609 795 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 DNAJC5BQ9UF47 199 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 SLC4A4Q9Y6R1 1079 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 SCAF11Q99590 1463 aaKnown RBP16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 CHST3Q7LGC8 479 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 DHX58Q96C10 678 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 TIGD1Q96MW7 591 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 BAG3O95817 575 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 TSPY3P0CV98 308 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 TSPY8P0CW00 308 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 PRIM1P49642 420 aaKnown RBP16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 IFI16Q16666 785 aaKnown RBP16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 SPAG5Q96R06 1193 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 ARFGAP3Q9NP61 516 aa16.17■□□□□ 0.18
PLXNB3-209ENST00000538966 SBNO2Q9Y2G9 1366 aa16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 CYLC1P35663 651 aaPredicted RBP16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 CCDC174Q6PII3 467 aa16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 CDC5LQ99459 802 aaKnown RBP16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 F13A1P00488 732 aa16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 FBXO31Q5XUX0 539 aaPredicted RBP16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 FBF1Q8TES7 1133 aa16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 PDE1AP54750 535 aa16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 KARSQ15046 597 aaKnown RBP16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 RTN1Q16799 776 aa16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 FAM200AQ8TCP9 573 aa16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 PPM1EQ8WY54 764 aa16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 KRT13P13646 458 aa16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 KCNG4Q8TDN1 519 aa16.16■□□□□ 0.18
PLXNB3-209ENST00000538966 CYP7A1P22680 504 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 LMOD1P29536 600 aaPredicted RBP16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 C6orf163Q5TEZ5 329 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 ATRIPQ8WXE1 791 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 BBXQ8WY36 941 aaPredicted RBP16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 CTAGE1Q96RT6 745 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 CRNKL1Q9BZJ0 848 aaKnown RBP16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 TTC21AQ8NDW8 1320 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 CA8P35219 290 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 MXRA7P84157 204 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 TSNARE1Q96NA8 513 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 CABP5Q9NP86 173 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 NOS1P29475 1434 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 CAVIN2O95810 425 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 HSPA4P34932 840 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 HDAC1Q13547 482 aaPredicted RBP16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 SYNCQ9H7C4 482 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 RPRD2Q5VT52 1461 aaKnown RBP16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 ACTN2P35609 894 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 LRRC27Q9C0I9 530 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 ZMYND15Q9H091 742 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 MRVI1Q9Y6F6 885 aa16.15■□□□□ 0.18
PLXNB3-209ENST00000538966 RTL1A6NKG5 1358 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 FERP16591 822 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 NMIQ13287 307 aaPredicted RBP16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 DHX29Q7Z478 1369 aaKnown RBP16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 HLA-DOAP06340 250 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 ASIC1P78348 528 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 SMIM23A6NLE4 172 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 F8W031 263 aaPredicted RBP16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 STX17P56962 302 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 GRIPAP1Q4V328 841 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 IFNL2Q8IZJ0 200 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 SELENOSQ9BQE4 189 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 KRT23Q9C075 422 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 LDHCP07864 332 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 ANKRD13DQ6ZTN6 518 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 UBE2Q2Q8WVN8 375 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 TNNQ9UQP3 1299 aa16.14■□□□□ 0.17
PLXNB3-209ENST00000538966 EXOC5O00471 708 aa16.13■□□□□ 0.17
PLXNB3-209ENST00000538966 PA2G4Q9UQ80 394 aaKnown RBP16.13■□□□□ 0.17
PLXNB3-209ENST00000538966 CTAGE9A4FU28 777 aa16.13■□□□□ 0.17
PLXNB3-209ENST00000538966 MCMDC2Q4G0Z9 681 aa16.13■□□□□ 0.17
PLXNB3-209ENST00000538966 NBPF7P0C2Y1 421 aaPredicted RBP16.13■□□□□ 0.17
PLXNB3-209ENST00000538966 KIF4AO95239 1232 aa16.13■□□□□ 0.17
PLXNB3-209ENST00000538966 SELENOOQ9BVL4 669 aa16.13■□□□□ 0.17
PLXNB3-209ENST00000538966 LZTFL1Q9NQ48 299 aa16.13■□□□□ 0.17
PLXNB3-209ENST00000538966 TTC21BQ7Z4L5 1316 aa16.13■□□□□ 0.17
PLXNB3-209ENST00000538966 DNAJC21Q5F1R6 531 aaKnown RBP16.13■□□□□ 0.17
PLXNB3-209ENST00000538966 ANKRD24Q8TF21 1146 aa16.13■□□□□ 0.17
PLXNB3-209ENST00000538966 UGGT2Q9NYU1 1516 aa16.12■□□□□ 0.17
PLXNB3-209ENST00000538966 GPATCH8Q9UKJ3 1502 aaKnown RBP16.12■□□□□ 0.17
PLXNB3-209ENST00000538966 TYRO3Q06418 890 aa16.12■□□□□ 0.17
PLXNB3-209ENST00000538966 CHRNA2Q15822 529 aa16.12■□□□□ 0.17
PLXNB3-209ENST00000538966 IGSF3O75054 1194 aa16.12■□□□□ 0.17
PLXNB3-209ENST00000538966 UQCRFS1P1P0C7P4 283 aa16.12■□□□□ 0.17
PLXNB3-209ENST00000538966 CLCN1P35523 988 aa16.12■□□□□ 0.17
PLXNB3-209ENST00000538966 CCDC6Q16204 474 aa16.12■□□□□ 0.17
PLXNB3-209ENST00000538966 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
PLXNB3-209ENST00000538966 PICALMQ13492 652 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms