RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 DOK7Q18PE1 504 aa19.1■□□□□ 0.65
RAB40B-202ENST00000538809 CNTROBQ8N137 903 aa19.1■□□□□ 0.65
RAB40B-202ENST00000538809 TTLL11Q8NHH1 800 aa19.1■□□□□ 0.65
RAB40B-202ENST00000538809 EYA3Q99504 573 aa19.1■□□□□ 0.65
RAB40B-202ENST00000538809 BCL2L13Q9BXK5 485 aa19.1■□□□□ 0.65
RAB40B-202ENST00000538809 GREM2Q9H772 168 aa19.1■□□□□ 0.65
RAB40B-202ENST00000538809 ANKIB1Q9P2G1 1089 aa19.1■□□□□ 0.65
RAB40B-202ENST00000538809 SHTN1A0MZ66 631 aa19.09■□□□□ 0.65
RAB40B-202ENST00000538809 ECE2O60344 883 aa19.09■□□□□ 0.65
RAB40B-202ENST00000538809 TNIP1Q15025 636 aa19.09■□□□□ 0.65
RAB40B-202ENST00000538809 PODXL2Q9NZ53 605 aa19.09■□□□□ 0.65
RAB40B-202ENST00000538809 MKRN1Q9UHC7 482 aaKnown RBP19.09■□□□□ 0.65
RAB40B-202ENST00000538809 RTL9Q8NET4 1388 aa19.08■□□□□ 0.65
RAB40B-202ENST00000538809 PSMD14O00487 310 aa19.08■□□□□ 0.64
RAB40B-202ENST00000538809 USP50Q70EL3 339 aaPredicted RBP19.08■□□□□ 0.64
RAB40B-202ENST00000538809 LINS1Q8NG48 757 aa19.08■□□□□ 0.64
RAB40B-202ENST00000538809 CDC5LQ99459 802 aaKnown RBP19.08■□□□□ 0.64
RAB40B-202ENST00000538809 ADARB2Q9NS39 739 aaKnown RBP19.08■□□□□ 0.64
RAB40B-202ENST00000538809 GGA1Q9UJY5 639 aa19.08■□□□□ 0.64
RAB40B-202ENST00000538809 CASP7P55210 303 aa19.07■□□□□ 0.64
RAB40B-202ENST00000538809 FMR1Q06787 632 aaKnown RBP eCLIP19.07■□□□□ 0.64
RAB40B-202ENST00000538809 KCNQ5Q9NR82 932 aa19.07■□□□□ 0.64
RAB40B-202ENST00000538809 ZBTB12Q9Y330 459 aaPredicted RBP19.07■□□□□ 0.64
RAB40B-202ENST00000538809 XDHP47989 1333 aa19.06■□□□□ 0.64
RAB40B-202ENST00000538809 TMEM88BA6NKF7 163 aa19.06■□□□□ 0.64
RAB40B-202ENST00000538809 FAM161AQ3B820 660 aa19.06■□□□□ 0.64
RAB40B-202ENST00000538809 ZC3H12CQ9C0D7 883 aaKnown RBP19.06■□□□□ 0.64
RAB40B-202ENST00000538809 CNTNAP1P78357 1384 aa19.06■□□□□ 0.64
RAB40B-202ENST00000538809 MICALL2Q8IY33 904 aa19.05■□□□□ 0.64
RAB40B-202ENST00000538809 TRPM4Q8TD43 1214 aa19.05■□□□□ 0.64
RAB40B-202ENST00000538809 PLA2G12BQ9BX93 195 aa19.05■□□□□ 0.64
RAB40B-202ENST00000538809 E9PSI1 815 aa19.04■□□□□ 0.64
RAB40B-202ENST00000538809 G3V3G9 751 aa19.04■□□□□ 0.64
RAB40B-202ENST00000538809 TRAF5O00463 557 aa19.04■□□□□ 0.64
RAB40B-202ENST00000538809 BEND3Q5T5X7 828 aa19.04■□□□□ 0.64
RAB40B-202ENST00000538809 DCAF8Q5TAQ9 597 aa19.04■□□□□ 0.64
RAB40B-202ENST00000538809 CNOT7Q9UIV1 285 aaKnown RBP19.04■□□□□ 0.64
RAB40B-202ENST00000538809 WTIPA6NIX2 430 aaPredicted RBP19.03■□□□□ 0.64
RAB40B-202ENST00000538809 ITGA6P23229 1130 aa19.03■□□□□ 0.64
RAB40B-202ENST00000538809 SLFN5Q08AF3 891 aa19.03■□□□□ 0.64
RAB40B-202ENST00000538809 BSDC1Q9NW68 430 aaPredicted RBP19.03■□□□□ 0.64
RAB40B-202ENST00000538809 MINPP1Q9UNW1 487 aa19.03■□□□□ 0.64
RAB40B-202ENST00000538809 ATP2B4P23634 1241 aa19.02■□□□□ 0.64
RAB40B-202ENST00000538809 IGHMBP2P38935 993 aaKnown RBP19.02■□□□□ 0.64
RAB40B-202ENST00000538809 HIRAP54198 1017 aaPredicted RBP19.02■□□□□ 0.64
RAB40B-202ENST00000538809 SLC4A10Q6U841 1118 aa19.02■□□□□ 0.64
RAB40B-202ENST00000538809 H7C1D1 291 aa19.01■□□□□ 0.63
RAB40B-202ENST00000538809 HSPA1AP0DMV8 641 aaKnown RBP19.01■□□□□ 0.63
RAB40B-202ENST00000538809 HSPA1BP0DMV9 641 aaKnown RBP19.01■□□□□ 0.63
RAB40B-202ENST00000538809 TRMT2AQ8IZ69 625 aaKnown RBP19.01■□□□□ 0.63
RAB40B-202ENST00000538809 CHMP3Q9Y3E7 222 aa19.01■□□□□ 0.63
RAB40B-202ENST00000538809 MED23Q9ULK4 1368 aa19.01■□□□□ 0.63
RAB40B-202ENST00000538809 THSD7BQ9C0I4 1608 aa19■□□□□ 0.63
RAB40B-202ENST00000538809 EGFRP00533 1210 aa19■□□□□ 0.63
RAB40B-202ENST00000538809 CSF1RP07333 972 aa19■□□□□ 0.63
RAB40B-202ENST00000538809 TBC1D10BQ4KMP7 808 aaPredicted RBP19■□□□□ 0.63
RAB40B-202ENST00000538809 SAMD7Q7Z3H4 446 aa19■□□□□ 0.63
RAB40B-202ENST00000538809 DPF2Q92785 391 aa19■□□□□ 0.63
RAB40B-202ENST00000538809 CDCA7LQ96GN5 454 aa19■□□□□ 0.63
RAB40B-202ENST00000538809 GLIS2Q9BZE0 524 aaPredicted RBP19■□□□□ 0.63
RAB40B-202ENST00000538809 ABT1Q9ULW3 272 aaKnown RBP19■□□□□ 0.63
RAB40B-202ENST00000538809 RPS12P25398 132 aaKnown RBP18.99■□□□□ 0.63
RAB40B-202ENST00000538809 CCT4P50991 539 aaKnown RBP18.99■□□□□ 0.63
RAB40B-202ENST00000538809 FOXO4P98177 505 aa18.99■□□□□ 0.63
RAB40B-202ENST00000538809 ANKRD18BA2A2Z9 1011 aa18.98■□□□□ 0.63
RAB40B-202ENST00000538809 GRM8O00222 908 aa18.98■□□□□ 0.63
RAB40B-202ENST00000538809 VIL1P09327 827 aaKnown RBP18.98■□□□□ 0.63
RAB40B-202ENST00000538809 VEGFBP49765 207 aa18.98■□□□□ 0.63
RAB40B-202ENST00000538809 EPHA10Q5JZY3 1008 aa18.98■□□□□ 0.63
RAB40B-202ENST00000538809 MRPL50Q8N5N7 158 aaKnown RBP18.98■□□□□ 0.63
RAB40B-202ENST00000538809 MPHOSPH8Q99549 860 aa18.98■□□□□ 0.63
RAB40B-202ENST00000538809 SRCIN1Q9C0H9 1055 aa18.98■□□□□ 0.63
RAB40B-202ENST00000538809 RBM26Q5T8P6 1007 aaKnown RBP18.97■□□□□ 0.63
RAB40B-202ENST00000538809 C9orf78Q9NZ63 289 aaPredicted RBP18.97■□□□□ 0.63
RAB40B-202ENST00000538809 ZNF609O15014 1411 aa18.97■□□□□ 0.63
RAB40B-202ENST00000538809 RASSF10A6NK89 507 aa18.96■□□□□ 0.63
RAB40B-202ENST00000538809 ALDH1L1O75891 902 aa18.96■□□□□ 0.63
RAB40B-202ENST00000538809 KLRK1P26718 216 aa18.96■□□□□ 0.63
RAB40B-202ENST00000538809 DEFB115Q30KQ5 88 aa18.96■□□□□ 0.63
RAB40B-202ENST00000538809 CST9Q5W186 159 aa18.96■□□□□ 0.63
RAB40B-202ENST00000538809 DIEXFQ68CQ4 756 aaKnown RBP18.96■□□□□ 0.63
RAB40B-202ENST00000538809 LMBR1LQ6UX01 489 aa18.96■□□□□ 0.63
RAB40B-202ENST00000538809 TXNRD3Q86VQ6 643 aa18.96■□□□□ 0.63
RAB40B-202ENST00000538809 ZC3H15Q8WU90 426 aaKnown RBP18.96■□□□□ 0.63
RAB40B-202ENST00000538809 SSH1Q8WYL5 1049 aa18.96■□□□□ 0.63
RAB40B-202ENST00000538809 ZNF408Q9H9D4 720 aa18.96■□□□□ 0.63
RAB40B-202ENST00000538809 PGAP2Q9UHJ9 254 aa18.96■□□□□ 0.63
RAB40B-202ENST00000538809 ECM29Q5VYK3 1845 aa18.95■□□□□ 0.62
RAB40B-202ENST00000538809 CELF2O95319 508 aaKnown RBP18.95■□□□□ 0.62
RAB40B-202ENST00000538809 CHRNDQ07001 517 aa18.95■□□□□ 0.62
RAB40B-202ENST00000538809 IFIT5Q13325 482 aaKnown RBP18.95■□□□□ 0.62
RAB40B-202ENST00000538809 KIF4BQ2VIQ3 1234 aa18.95■□□□□ 0.62
RAB40B-202ENST00000538809 RSBN1LQ6PCB5 846 aaPredicted RBP18.95■□□□□ 0.62
RAB40B-202ENST00000538809 MIER1Q8N108 512 aa18.95■□□□□ 0.62
RAB40B-202ENST00000538809 FBXW7Q969H0 707 aa18.95■□□□□ 0.62
RAB40B-202ENST00000538809 ZNF804BA4D1E1 1349 aa18.95■□□□□ 0.62
RAB40B-202ENST00000538809 USP17L3A6NCW0 530 aa18.94■□□□□ 0.62
RAB40B-202ENST00000538809 USP17L4A6NCW7 530 aa18.94■□□□□ 0.62
RAB40B-202ENST00000538809 DLK2Q6UY11 383 aa18.94■□□□□ 0.62
RAB40B-202ENST00000538809 PAXIP1Q6ZW49 1069 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms