RNA–Protein interactions for RNA: ENST00000538494.1

SP140-212, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 629 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-212ENST00000538494 NFKBIEO00221 500 aa7.87□□□□□ -1.15
SP140-212ENST00000538494 SH3BP2P78314 561 aa7.87□□□□□ -1.15
SP140-212ENST00000538494 MDM2Q00987 491 aaPredicted RBP7.87□□□□□ -1.15
SP140-212ENST00000538494 ITPK1Q13572 414 aa7.87□□□□□ -1.15
SP140-212ENST00000538494 TRAPPC3LQ5T215 181 aa7.87□□□□□ -1.15
SP140-212ENST00000538494 PIGBQ92521 554 aa7.87□□□□□ -1.15
SP140-212ENST00000538494 PARP3Q9Y6F1 533 aa7.87□□□□□ -1.15
SP140-212ENST00000538494 CASP8AP2Q9UKL3 1982 aa7.87□□□□□ -1.15
SP140-212ENST00000538494 TIAM2Q8IVF5 1701 aa7.86□□□□□ -1.15
SP140-212ENST00000538494 CA12O43570 354 aa7.86□□□□□ -1.15
SP140-212ENST00000538494 MPRIPQ6WCQ1 1025 aa7.86□□□□□ -1.15
SP140-212ENST00000538494 SCN4AP35499 1836 aa7.86□□□□□ -1.15
SP140-212ENST00000538494 ADAMTSL1Q8N6G6 1762 aa7.86□□□□□ -1.15
SP140-212ENST00000538494 ZNF831Q5JPB2 1677 aa7.86□□□□□ -1.15
SP140-212ENST00000538494 CYP27B1O15528 508 aa7.85□□□□□ -1.15
SP140-212ENST00000538494 MAP2K2P36507 400 aa7.85□□□□□ -1.15
SP140-212ENST00000538494 HABP4Q5JVS0 413 aaKnown RBP7.85□□□□□ -1.15
SP140-212ENST00000538494 RTCBQ9Y3I0 505 aaKnown RBP7.85□□□□□ -1.15
SP140-212ENST00000538494 LTBP1Q14766 1721 aa7.85□□□□□ -1.15
SP140-212ENST00000538494 SBNO2Q9Y2G9 1366 aa7.84□□□□□ -1.15
SP140-212ENST00000538494 MON2Q7Z3U7 1717 aa7.84□□□□□ -1.15
SP140-212ENST00000538494 SOBPA7XYQ1 873 aa7.84□□□□□ -1.15
SP140-212ENST00000538494 RPS6KA4O75676 772 aa7.84□□□□□ -1.15
SP140-212ENST00000538494 TM4SF1P30408 202 aa7.84□□□□□ -1.15
SP140-212ENST00000538494 CHRNA5P30532 468 aa7.84□□□□□ -1.15
SP140-212ENST00000538494 DDR1Q08345 913 aa7.84□□□□□ -1.15
SP140-212ENST00000538494 SCARF1Q14162 830 aa7.84□□□□□ -1.15
SP140-212ENST00000538494 NBPF1Q3BBV0 1214 aa7.84□□□□□ -1.15
SP140-212ENST00000538494 MRPL14Q6P1L8 145 aaKnown RBP7.84□□□□□ -1.15
SP140-212ENST00000538494 RETREG3Q86VR2 466 aa7.84□□□□□ -1.15
SP140-212ENST00000538494 TAF1DQ9H5J8 278 aaPredicted RBP7.84□□□□□ -1.15
SP140-212ENST00000538494 SMG6Q86US8 1419 aaKnown RBP7.84□□□□□ -1.15
SP140-212ENST00000538494 INSRP06213 1382 aa7.84□□□□□ -1.16
SP140-212ENST00000538494 KTN1Q86UP2 1357 aaKnown RBP7.84□□□□□ -1.16
SP140-212ENST00000538494 PCDH11XQ9BZA7 1347 aa7.83□□□□□ -1.16
SP140-212ENST00000538494 PCDH11YQ9BZA8 1340 aa7.83□□□□□ -1.16
SP140-212ENST00000538494 LTBP3Q9NS15 1303 aa7.83□□□□□ -1.16
SP140-212ENST00000538494 COL6A3P12111 3177 aa7.83□□□□□ -1.16
SP140-212ENST00000538494 IQCA1LA6NCM1 817 aa7.83□□□□□ -1.16
SP140-212ENST00000538494 TULP1O00294 542 aaPredicted RBP7.83□□□□□ -1.16
SP140-212ENST00000538494 LINC01559Q495D7 138 aa7.83□□□□□ -1.16
SP140-212ENST00000538494 NBPF6Q5VWK0 638 aa7.83□□□□□ -1.16
SP140-212ENST00000538494 NBPF4Q96M43 638 aa7.83□□□□□ -1.16
SP140-212ENST00000538494 PURBQ96QR8 312 aaKnown RBP7.83□□□□□ -1.16
SP140-212ENST00000538494 BEGAINQ9BUH8 593 aa7.83□□□□□ -1.16
SP140-212ENST00000538494 TLL2Q9Y6L7 1015 aa7.83□□□□□ -1.16
SP140-212ENST00000538494 RGPD2P0DJD1 1756 aa7.83□□□□□ -1.16
SP140-212ENST00000538494 KDRP35968 1356 aa7.83□□□□□ -1.16
SP140-212ENST00000538494 MYH14Q7Z406 1995 aaKnown RBP7.82□□□□□ -1.16
SP140-212ENST00000538494 EVC2Q86UK5 1308 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 CNTNAP4Q9C0A0 1308 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 DLEC1Q9Y238 1755 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 POLRMTO00411 1230 aaKnown RBP7.82□□□□□ -1.16
SP140-212ENST00000538494 DDNO94850 711 aaPredicted RBP7.82□□□□□ -1.16
SP140-212ENST00000538494 CCNYL3P0C7X3 344 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 HOXC9P31274 260 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 ECE1P42892 770 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 MAP2K5Q13163 448 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 DGKZQ13574 1117 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 FER1L6Q2WGJ9 1857 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 NME9Q86XW9 330 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 KCTD17Q8N5Z5 321 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 BAP1Q92560 729 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 CAPNS2Q96L46 248 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 GPR101Q96P66 508 aaPredicted RBP7.82□□□□□ -1.16
SP140-212ENST00000538494 SLC4A9Q96Q91 983 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 ASAP1Q9ULH1 1129 aa7.82□□□□□ -1.16
SP140-212ENST00000538494 C6orf229H3BNL8 230 aa7.81□□□□□ -1.16
SP140-212ENST00000538494 MS4A1P11836 297 aa7.81□□□□□ -1.16
SP140-212ENST00000538494 FXR1P51114 621 aaKnown RBP eCLIP7.81□□□□□ -1.16
SP140-212ENST00000538494 NNTQ13423 1086 aa7.81□□□□□ -1.16
SP140-212ENST00000538494 NUTM1Q86Y26 1132 aa7.81□□□□□ -1.16
SP140-212ENST00000538494 TTLL6Q8N841 843 aa7.81□□□□□ -1.16
SP140-212ENST00000538494 NRXN2Q9P2S2 1712 aa7.81□□□□□ -1.16
SP140-212ENST00000538494 ADAMTS7Q9UKP4 1686 aa7.8□□□□□ -1.16
SP140-212ENST00000538494 DLL1O00548 723 aa7.8□□□□□ -1.16
SP140-212ENST00000538494 IRF6O14896 467 aa7.8□□□□□ -1.16
SP140-212ENST00000538494 RFC4P35249 363 aa7.8□□□□□ -1.16
SP140-212ENST00000538494 WDR4P57081 412 aaKnown RBP7.8□□□□□ -1.16
SP140-212ENST00000538494 ERFEQ4G0M1 354 aa7.8□□□□□ -1.16
SP140-212ENST00000538494 CNTROBQ8N137 903 aa7.8□□□□□ -1.16
SP140-212ENST00000538494 HHIPL1Q96JK4 782 aa7.8□□□□□ -1.16
SP140-212ENST00000538494 UNC93B1Q9H1C4 597 aa7.8□□□□□ -1.16
SP140-212ENST00000538494 DDX21Q9NR30 783 aaKnown RBP eCLIP7.8□□□□□ -1.16
SP140-212ENST00000538494 ATG3Q9NT62 314 aa7.8□□□□□ -1.16
SP140-212ENST00000538494 USP42Q9H9J4 1324 aaKnown RBP7.79□□□□□ -1.16
SP140-212ENST00000538494 COL5A3P25940 1745 aaPredicted RBP7.79□□□□□ -1.16
SP140-212ENST00000538494 VSIG8P0DPA2 414 aa7.79□□□□□ -1.16
SP140-212ENST00000538494 TATP17735 454 aaPredicted RBP7.79□□□□□ -1.16
SP140-212ENST00000538494 BRPF1P55201 1214 aaPredicted RBP7.79□□□□□ -1.16
SP140-212ENST00000538494 SOX10P56693 466 aa7.79□□□□□ -1.16
SP140-212ENST00000538494 KCNMA1Q12791 1236 aa7.79□□□□□ -1.16
SP140-212ENST00000538494 PNMA8AQ86V59 439 aaPredicted RBP7.79□□□□□ -1.16
SP140-212ENST00000538494 RAPGEF4Q8WZA2 1011 aa7.79□□□□□ -1.16
SP140-212ENST00000538494 LTV1Q96GA3 475 aaPredicted RBP7.79□□□□□ -1.16
SP140-212ENST00000538494 FDX1P10109 184 aa7.78□□□□□ -1.16
SP140-212ENST00000538494 TIMP2P16035 220 aa7.78□□□□□ -1.16
SP140-212ENST00000538494 VARSP26640 1264 aaKnown RBP7.78□□□□□ -1.16
SP140-212ENST00000538494 CST9Q5W186 159 aa7.78□□□□□ -1.16
SP140-212ENST00000538494 CYP4F22Q6NT55 531 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms