RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 NOP58Q9Y2X3 529 aaKnown RBP12.48□□□□□ -0.41
CD9-207ENST00000538418 MRVI1Q9Y6F6 885 aa12.48□□□□□ -0.41
CD9-207ENST00000538418 GBP2P32456 591 aaPredicted RBP12.47□□□□□ -0.41
CD9-207ENST00000538418 ANAPC15P60006 121 aa12.47□□□□□ -0.41
CD9-207ENST00000538418 BICDL1Q6ZP65 573 aa12.47□□□□□ -0.41
CD9-207ENST00000538418 C3orf58Q8NDZ4 430 aa12.47□□□□□ -0.41
CD9-207ENST00000538418 GLIS3Q8NEA6 775 aa12.47□□□□□ -0.41
CD9-207ENST00000538418 TMEM74Q96NL1 305 aa12.47□□□□□ -0.41
CD9-207ENST00000538418 KLF16Q9BXK1 252 aaPredicted RBP12.47□□□□□ -0.41
CD9-207ENST00000538418 F6X3S4 739 aa12.46□□□□□ -0.41
CD9-207ENST00000538418 U2SURPO15042 1029 aaKnown RBP12.46□□□□□ -0.41
CD9-207ENST00000538418 RAB33AQ14088 237 aa12.46□□□□□ -0.41
CD9-207ENST00000538418 KIAA0319Q5VV43 1072 aa12.46□□□□□ -0.41
CD9-207ENST00000538418 PMEPA1Q969W9 287 aa12.46□□□□□ -0.41
CD9-207ENST00000538418 RNPC3Q96LT9 517 aaKnown RBP12.46□□□□□ -0.41
CD9-207ENST00000538418 TRIM56Q9BRZ2 755 aaKnown RBP12.46□□□□□ -0.41
CD9-207ENST00000538418 CNTN3Q9P232 1028 aa12.46□□□□□ -0.41
CD9-207ENST00000538418 TRAK1Q9UPV9 953 aa12.46□□□□□ -0.41
CD9-207ENST00000538418 KLF4O43474 513 aa12.45□□□□□ -0.42
CD9-207ENST00000538418 SOX9P48436 509 aa12.45□□□□□ -0.42
CD9-207ENST00000538418 MAP3K10Q02779 954 aa12.45□□□□□ -0.42
CD9-207ENST00000538418 ZNF296Q8WUU4 475 aaPredicted RBP12.45□□□□□ -0.42
CD9-207ENST00000538418 ZFAND3Q9H8U3 227 aa12.45□□□□□ -0.42
CD9-207ENST00000538418 METTL14Q9HCE5 456 aaKnown RBP12.45□□□□□ -0.42
CD9-207ENST00000538418 ABI2Q9NYB9 513 aaPredicted RBP12.45□□□□□ -0.42
CD9-207ENST00000538418 RLBP1P12271 317 aa12.44□□□□□ -0.42
CD9-207ENST00000538418 RNF144AP50876 292 aaPredicted RBP12.44□□□□□ -0.42
CD9-207ENST00000538418 COL9A2Q14055 689 aaPredicted RBP12.44□□□□□ -0.42
CD9-207ENST00000538418 EMID1Q96A84 441 aaPredicted RBP12.44□□□□□ -0.42
CD9-207ENST00000538418 NT5C1AQ9BXI3 368 aa12.44□□□□□ -0.42
CD9-207ENST00000538418 URB2Q14146 1524 aaKnown RBP12.43□□□□□ -0.42
CD9-207ENST00000538418 EPB42P16452 691 aa12.43□□□□□ -0.42
CD9-207ENST00000538418 PHKA2P46019 1235 aa12.43□□□□□ -0.42
CD9-207ENST00000538418 VEGFBP49765 207 aa12.43□□□□□ -0.42
CD9-207ENST00000538418 FILIP1Q7Z7B0 1213 aa12.43□□□□□ -0.42
CD9-207ENST00000538418 EHD4Q9H223 541 aa12.43□□□□□ -0.42
CD9-207ENST00000538418 SNTG2Q9NY99 539 aa12.43□□□□□ -0.42
CD9-207ENST00000538418 COL4A3BPQ9Y5P4 624 aa12.43□□□□□ -0.42
CD9-207ENST00000538418 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
CD9-207ENST00000538418 XYLBO75191 536 aa12.42□□□□□ -0.42
CD9-207ENST00000538418 CES1P23141 567 aa12.42□□□□□ -0.42
CD9-207ENST00000538418 WDR4P57081 412 aaKnown RBP12.42□□□□□ -0.42
CD9-207ENST00000538418 ANKRD24Q8TF21 1146 aa12.42□□□□□ -0.42
CD9-207ENST00000538418 HNRNPLLQ8WVV9 542 aaKnown RBP12.42□□□□□ -0.42
CD9-207ENST00000538418 DEPDC7Q96QD5 511 aa12.42□□□□□ -0.42
CD9-207ENST00000538418 IFT57Q9NWB7 429 aa12.42□□□□□ -0.42
CD9-207ENST00000538418 PPM1HQ9ULR3 514 aa12.42□□□□□ -0.42
CD9-207ENST00000538418 SPATA31C2B4DYI2 1134 aa12.41□□□□□ -0.42
CD9-207ENST00000538418 GRNP28799 593 aaKnown RBP12.41□□□□□ -0.42
CD9-207ENST00000538418 FCGRTP55899 365 aa12.41□□□□□ -0.42
CD9-207ENST00000538418 FBXL19Q6PCT2 694 aa12.41□□□□□ -0.42
CD9-207ENST00000538418 LRP10Q7Z4F1 713 aa12.41□□□□□ -0.42
CD9-207ENST00000538418 CPLX3Q8WVH0 158 aa12.41□□□□□ -0.42
CD9-207ENST00000538418 KCNQ5Q9NR82 932 aa12.41□□□□□ -0.42
CD9-207ENST00000538418 IFT140Q96RY7 1462 aa12.4□□□□□ -0.42
CD9-207ENST00000538418 A0A1W2PP55 124 aa12.4□□□□□ -0.42
CD9-207ENST00000538418 EIF5BO60841 1220 aaKnown RBP12.4□□□□□ -0.42
CD9-207ENST00000538418 ATP4AP20648 1035 aa12.4□□□□□ -0.42
CD9-207ENST00000538418 RASA3Q14644 834 aa12.4□□□□□ -0.42
CD9-207ENST00000538418 CTC1Q2NKJ3 1217 aa12.4□□□□□ -0.42
CD9-207ENST00000538418 PLEKHG4Q58EX7 1191 aa12.4□□□□□ -0.42
CD9-207ENST00000538418 LRRC69Q6ZNQ3 347 aa12.4□□□□□ -0.42
CD9-207ENST00000538418 NLRP13Q86W25 1043 aa12.4□□□□□ -0.42
CD9-207ENST00000538418 RHOVQ96L33 236 aa12.4□□□□□ -0.42
CD9-207ENST00000538418 ZIC5Q96T25 663 aa12.4□□□□□ -0.42
CD9-207ENST00000538418 R3HCC1Q9Y3T6 440 aaKnown RBP12.4□□□□□ -0.42
CD9-207ENST00000538418 SUPT16HQ9Y5B9 1047 aaKnown RBP12.4□□□□□ -0.42
CD9-207ENST00000538418 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.43
CD9-207ENST00000538418 EGFRP00533 1210 aa12.39□□□□□ -0.43
CD9-207ENST00000538418 TTC39BQ5VTQ0 682 aaPredicted RBP12.39□□□□□ -0.43
CD9-207ENST00000538418 OXCT2Q9BYC2 517 aaPredicted RBP12.39□□□□□ -0.43
CD9-207ENST00000538418 PRKAG3Q9UGI9 489 aa12.39□□□□□ -0.43
CD9-207ENST00000538418 FAM221BA6H8Z2 402 aa12.38□□□□□ -0.43
CD9-207ENST00000538418 TIMP2P16035 220 aa12.38□□□□□ -0.43
CD9-207ENST00000538418 PRPF40BQ6NWY9 871 aaKnown RBP12.38□□□□□ -0.43
CD9-207ENST00000538418 SV2BQ7L1I2 683 aa12.38□□□□□ -0.43
CD9-207ENST00000538418 PCDH12Q9NPG4 1184 aa12.38□□□□□ -0.43
CD9-207ENST00000538418 AKAP2Q9Y2D5 859 aa12.38□□□□□ -0.43
CD9-207ENST00000538418 GREM1O60565 184 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 DNAJC6O75061 913 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 EDN3P14138 238 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 SLC19A1P41440 591 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 CHMP4BP1P59074 171 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 TYRO3Q06418 890 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 MAP3K11Q16584 847 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 ARSJQ5FYB0 599 aaPredicted RBP12.37□□□□□ -0.43
CD9-207ENST00000538418 PCNX4Q63HM2 1172 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 PHC3Q8NDX5 983 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 ANAPC16Q96DE5 110 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 INSM2Q96T92 566 aaPredicted RBP12.37□□□□□ -0.43
CD9-207ENST00000538418 SPC25Q9HBM1 224 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 C11orf16Q9NQ32 467 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 LATS2Q9NRM7 1088 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 KLHL42Q9P2K6 505 aa12.37□□□□□ -0.43
CD9-207ENST00000538418 ARID4BQ4LE39 1312 aaPredicted RBP12.37□□□□□ -0.43
CD9-207ENST00000538418 GARTP22102 1010 aa12.36□□□□□ -0.43
CD9-207ENST00000538418 FAM160A1Q05DH4 1040 aa12.36□□□□□ -0.43
CD9-207ENST00000538418 PEAR1Q5VY43 1037 aaPredicted RBP12.36□□□□□ -0.43
CD9-207ENST00000538418 MEIOBQ8N635 442 aa12.36□□□□□ -0.43
CD9-207ENST00000538418 UBP1Q9NZI7 540 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms