RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 CYP19A1P11511 503 aaPredicted RBP7.9□□□□□ -1.14
USP28-206ENST00000538224 XRCC6P12956 609 aaKnown RBP eCLIP7.9□□□□□ -1.14
USP28-206ENST00000538224 ZSCAN23Q3MJ62 389 aa7.9□□□□□ -1.14
USP28-206ENST00000538224 GORABQ5T7V8 394 aa7.9□□□□□ -1.14
USP28-206ENST00000538224 NEUROD6Q96NK8 337 aa7.9□□□□□ -1.14
USP28-206ENST00000538224 ANO8Q9HCE9 1232 aaPredicted RBP7.9□□□□□ -1.14
USP28-206ENST00000538224 ASAP1Q9ULH1 1129 aa7.9□□□□□ -1.14
USP28-206ENST00000538224 KIF3AQ9Y496 699 aa7.9□□□□□ -1.14
USP28-206ENST00000538224 ATRNO75882 1429 aa7.89□□□□□ -1.15
USP28-206ENST00000538224 SPATA31A1Q5TZJ5 1347 aa7.89□□□□□ -1.15
USP28-206ENST00000538224 ANKRD18BA2A2Z9 1011 aa7.89□□□□□ -1.15
USP28-206ENST00000538224 LETM1O95202 739 aaPredicted RBP7.89□□□□□ -1.15
USP28-206ENST00000538224 F13A1P00488 732 aa7.89□□□□□ -1.15
USP28-206ENST00000538224 CCDC173Q0VFZ6 552 aa7.89□□□□□ -1.15
USP28-206ENST00000538224 TTC39AQ5SRH9 613 aa7.89□□□□□ -1.15
USP28-206ENST00000538224 ZMYM1Q5SVZ6 1142 aa7.89□□□□□ -1.15
USP28-206ENST00000538224 ZSCAN25Q6NSZ9 544 aa7.89□□□□□ -1.15
USP28-206ENST00000538224 CAVIN1Q6NZI2 390 aaKnown RBP7.89□□□□□ -1.15
USP28-206ENST00000538224 NLRP10Q86W26 655 aa7.89□□□□□ -1.15
USP28-206ENST00000538224 JARID2Q92833 1246 aaPredicted RBP7.89□□□□□ -1.15
USP28-206ENST00000538224 CTNNA3Q9UI47 895 aa7.89□□□□□ -1.15
USP28-206ENST00000538224 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.89□□□□□ -1.15
USP28-206ENST00000538224 SLIT2O94813 1529 aa7.88□□□□□ -1.15
USP28-206ENST00000538224 RTL9Q8NET4 1388 aa7.88□□□□□ -1.15
USP28-206ENST00000538224 GOLIM4O00461 696 aa7.88□□□□□ -1.15
USP28-206ENST00000538224 RGL2O15211 777 aa7.88□□□□□ -1.15
USP28-206ENST00000538224 RNF113AO15541 343 aaKnown RBP7.88□□□□□ -1.15
USP28-206ENST00000538224 SYT1P21579 422 aa7.88□□□□□ -1.15
USP28-206ENST00000538224 GJB2P29033 226 aa7.88□□□□□ -1.15
USP28-206ENST00000538224 NASPP49321 788 aaPredicted RBP7.88□□□□□ -1.15
USP28-206ENST00000538224 CTSWP56202 376 aa7.88□□□□□ -1.15
USP28-206ENST00000538224 TTF1Q15361 905 aaPredicted RBP7.88□□□□□ -1.15
USP28-206ENST00000538224 DDB1Q16531 1140 aa7.88□□□□□ -1.15
USP28-206ENST00000538224 ADCK5Q3MIX3 580 aa7.88□□□□□ -1.15
USP28-206ENST00000538224 LRSAM1Q6UWE0 723 aa7.88□□□□□ -1.15
USP28-206ENST00000538224 DDX46Q7L014 1031 aaKnown RBP7.88□□□□□ -1.15
USP28-206ENST00000538224 ZNF589Q86UQ0 364 aaPredicted RBP7.88□□□□□ -1.15
USP28-206ENST00000538224 CCDC83Q8IWF9 413 aa7.88□□□□□ -1.15
USP28-206ENST00000538224 SMARCC1Q92922 1105 aaPredicted RBP7.88□□□□□ -1.15
USP28-206ENST00000538224 TRIM44Q96DX7 344 aaPredicted RBP7.88□□□□□ -1.15
USP28-206ENST00000538224 ZNF512BQ96KM6 892 aaPredicted RBP7.88□□□□□ -1.15
USP28-206ENST00000538224 NEK1Q96PY6 1258 aa7.88□□□□□ -1.15
USP28-206ENST00000538224 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.88□□□□□ -1.15
USP28-206ENST00000538224 ZNF330Q9Y3S2 320 aaPredicted RBP7.88□□□□□ -1.15
USP28-206ENST00000538224 NHSQ6T4R5 1651 aa7.88□□□□□ -1.15
USP28-206ENST00000538224 COL24A1Q17RW2 1714 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 MROH5Q6ZUA9 1318 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 PDE8AO60658 829 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 UQCRFS1P1P0C7P4 283 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 UBE2HP62256 183 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 ATP2B3Q16720 1220 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 ME3Q16798 604 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 LRRC24Q50LG9 513 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 PARP10Q53GL7 1025 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 METTL24Q5JXM2 366 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 BARGINQ6ZT62 677 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 DZIP3Q86Y13 1208 aaKnown RBP7.87□□□□□ -1.15
USP28-206ENST00000538224 GPT2Q8TD30 523 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 LLPHQ9BRT6 129 aaKnown RBP7.87□□□□□ -1.15
USP28-206ENST00000538224 CCDC87Q9NVE4 849 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 TPCN1Q9ULQ1 816 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 ZNF652Q9Y2D9 606 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 ZBTB1Q9Y2K1 713 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 MYH13Q9UKX3 1938 aa7.87□□□□□ -1.15
USP28-206ENST00000538224 TIAM2Q8IVF5 1701 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 MAST3O60307 1309 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 ELP1O95163 1332 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 SPATA31A5Q5VU36 1347 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 SPATA31A7Q8IWB4 1347 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 IRS4O14654 1257 aaPredicted RBP7.86□□□□□ -1.15
USP28-206ENST00000538224 LARGE1O95461 756 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 TIMM10P62072 90 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 KRT85P78386 507 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 HMGN5P82970 282 aaKnown RBP7.86□□□□□ -1.15
USP28-206ENST00000538224 FGD1P98174 961 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 CCDC183Q5T5S1 534 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 LARP1BQ659C4 914 aaKnown RBP7.86□□□□□ -1.15
USP28-206ENST00000538224 LDHAL6AQ6ZMR3 332 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 FAM184AQ8NB25 1140 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 TTLL11Q8NHH1 800 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 APPBP2Q92624 585 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 GTF3C6Q969F1 213 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 SYTL4Q96C24 671 aaPredicted RBP7.86□□□□□ -1.15
USP28-206ENST00000538224 EDC3Q96F86 508 aaKnown RBP7.86□□□□□ -1.15
USP28-206ENST00000538224 FAM89AQ96GI7 184 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 XAGE2Q96GT9 111 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 ZNF594Q96JF6 807 aaPredicted RBP7.86□□□□□ -1.15
USP28-206ENST00000538224 ARXQ96QS3 562 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 CNNM1Q9NRU3 951 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 TRMT112Q9UI30 125 aaKnown RBP7.86□□□□□ -1.15
USP28-206ENST00000538224 MTMR6Q9Y217 621 aa7.86□□□□□ -1.15
USP28-206ENST00000538224 MYH14Q7Z406 1995 aaKnown RBP7.86□□□□□ -1.15
USP28-206ENST00000538224 WDR19Q8NEZ3 1342 aa7.85□□□□□ -1.15
USP28-206ENST00000538224 MAST2Q6P0Q8 1798 aa7.85□□□□□ -1.15
USP28-206ENST00000538224 VPS37CA5D8V6 355 aaPredicted RBP7.85□□□□□ -1.15
USP28-206ENST00000538224 CYP21A2P08686 494 aa7.85□□□□□ -1.15
USP28-206ENST00000538224 CPA1P15085 419 aa7.85□□□□□ -1.15
USP28-206ENST00000538224 ITGA6P23229 1130 aa7.85□□□□□ -1.15
USP28-206ENST00000538224 PRIM1P49642 420 aaKnown RBP7.85□□□□□ -1.15
USP28-206ENST00000538224 EIF5P55010 431 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms