RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 NEK1Q96PY6 1258 aa13.61□□□□□ -0.23
SLC28A1-204ENST00000538177 DSCC1Q9BVC3 393 aa13.61□□□□□ -0.23
SLC28A1-204ENST00000538177 ZBTB1Q9Y2K1 713 aa13.61□□□□□ -0.23
SLC28A1-204ENST00000538177 SPEF2Q9C093 1822 aa13.61□□□□□ -0.23
SLC28A1-204ENST00000538177 ERVV-1B6SEH8 477 aa13.61□□□□□ -0.23
SLC28A1-204ENST00000538177 CYP21A2P08686 494 aa13.61□□□□□ -0.23
SLC28A1-204ENST00000538177 NASPP49321 788 aaPredicted RBP13.61□□□□□ -0.23
SLC28A1-204ENST00000538177 PRIM1P49642 420 aaKnown RBP13.61□□□□□ -0.23
SLC28A1-204ENST00000538177 RNF113AO15541 343 aaKnown RBP13.6□□□□□ -0.23
SLC28A1-204ENST00000538177 IL6STP40189 918 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-204ENST00000538177 FOXD4L6Q3SYB3 417 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-204ENST00000538177 CCDC158Q5M9N0 1113 aa13.6□□□□□ -0.23
SLC28A1-204ENST00000538177 LRSAM1Q6UWE0 723 aa13.6□□□□□ -0.23
SLC28A1-204ENST00000538177 FOXD4L3Q6VB84 417 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-204ENST00000538177 SYNE4Q8N205 404 aa13.6□□□□□ -0.23
SLC28A1-204ENST00000538177 TTLL11Q8NHH1 800 aa13.6□□□□□ -0.23
SLC28A1-204ENST00000538177 XAGE2Q96GT9 111 aa13.6□□□□□ -0.23
SLC28A1-204ENST00000538177 TCEANC2Q96MN5 208 aa13.6□□□□□ -0.23
SLC28A1-204ENST00000538177 GADD45BO75293 160 aaPredicted RBP13.59□□□□□ -0.23
SLC28A1-204ENST00000538177 GPTP24298 496 aa13.59□□□□□ -0.23
SLC28A1-204ENST00000538177 TAF7LQ5H9L4 462 aa13.59□□□□□ -0.23
SLC28A1-204ENST00000538177 GDPD2Q9HCC8 539 aa13.59□□□□□ -0.23
SLC28A1-204ENST00000538177 THRAP3Q9Y2W1 955 aaKnown RBP13.59□□□□□ -0.23
SLC28A1-204ENST00000538177 RIPOR2Q9Y4F9 1068 aa13.59□□□□□ -0.23
SLC28A1-204ENST00000538177 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.59□□□□□ -0.23
SLC28A1-204ENST00000538177 ADORA1P30542 326 aa13.59□□□□□ -0.23
SLC28A1-204ENST00000538177 SYAP1Q96A49 352 aaPredicted RBP13.59□□□□□ -0.23
SLC28A1-204ENST00000538177 SYTL4Q96C24 671 aaPredicted RBP13.59□□□□□ -0.23
SLC28A1-204ENST00000538177 CNPY2Q9Y2B0 182 aa13.59□□□□□ -0.23
SLC28A1-204ENST00000538177 ABCC12Q96J65 1359 aa13.58□□□□□ -0.23
SLC28A1-204ENST00000538177 SPATA31A1Q5TZJ5 1347 aa13.58□□□□□ -0.23
SLC28A1-204ENST00000538177 PDCP20941 246 aa13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 CTSWP56202 376 aa13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 LRRFIP1Q32MZ4 808 aaKnown RBP13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 SLFNL1Q499Z3 407 aa13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 CCDC85AQ96PX6 553 aaPredicted RBP13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 PPP1R9BQ96SB3 815 aa13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 RBSNQ9H1K0 784 aa13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 TCHHQ07283 1943 aa13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 WNK3Q9BYP7 1800 aa13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 KAT6BQ8WYB5 2073 aa13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 MAST3O60307 1309 aa13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 IRS4O14654 1257 aaPredicted RBP13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 HMGB1P09429 215 aaKnown RBP13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 ITGA6P23229 1130 aa13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 TTC39AQ5SRH9 613 aa13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 GORABQ5T7V8 394 aa13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 LARP1BQ659C4 914 aaKnown RBP13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 DZIP3Q86Y13 1208 aaKnown RBP13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 GREM2Q9H772 168 aa13.58□□□□□ -0.24
SLC28A1-204ENST00000538177 SYCE3A1L190 88 aa13.57□□□□□ -0.24
SLC28A1-204ENST00000538177 HSPD1P10809 573 aaKnown RBP13.57□□□□□ -0.24
SLC28A1-204ENST00000538177 CCDC173Q0VFZ6 552 aa13.57□□□□□ -0.24
SLC28A1-204ENST00000538177 STOX1Q6ZVD7 989 aa13.57□□□□□ -0.24
SLC28A1-204ENST00000538177 ZNF34Q8IZ26 560 aa13.57□□□□□ -0.24
SLC28A1-204ENST00000538177 RIC1Q4ADV7 1423 aa13.57□□□□□ -0.24
SLC28A1-204ENST00000538177 ANKRD18BA2A2Z9 1011 aa13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 PDE8AO60658 829 aa13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 ZFYP08048 801 aaPredicted RBP13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 UBE2HP62256 183 aa13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 LDHAL6AQ6ZMR3 332 aa13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 Q6ZUG5 572 aa13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 RRAGDQ9NQL2 400 aaPredicted RBP13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 TRMT112Q9UI30 125 aaKnown RBP13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 ANKRD36CQ5JPF3 1778 aa13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 EIF5P55010 431 aaKnown RBP13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 FKBP4Q02790 459 aaKnown RBP eCLIP13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 DDB1Q16531 1140 aa13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 ATP2B3Q16720 1220 aa13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 CSPP1Q1MSJ5 1256 aa13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 METTL24Q5JXM2 366 aa13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 DHX32Q7L7V1 743 aaKnown RBP13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 GTF3C6Q969F1 213 aa13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 OSBP2Q969R2 916 aa13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 ZNF512BQ96KM6 892 aaPredicted RBP13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 TBC1D2BQ9UPU7 963 aa13.56□□□□□ -0.24
SLC28A1-204ENST00000538177 VPS37CA5D8V6 355 aaPredicted RBP13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 DTNBO60941 627 aa13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 INTS5Q6P9B9 1019 aaKnown RBP13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 ANP32BQ92688 251 aaKnown RBP13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 NUP98P52948 1817 aa13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 UBN2Q6ZU65 1347 aa13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 M0R2C6 588 aa13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 PHF14O94880 888 aa13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 ADAMTS2O95450 1211 aa13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 EXOSC10Q01780 885 aaKnown RBP13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 DNM1Q05193 864 aaKnown RBP13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 SCARF1Q14162 830 aa13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 VGLL2Q8N8G2 317 aa13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 AK7Q96M32 723 aa13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 AGXT2Q9BYV1 514 aa13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 LTBP4Q8N2S1 1624 aa13.55□□□□□ -0.24
SLC28A1-204ENST00000538177 ZAP70P43403 619 aa13.54□□□□□ -0.24
SLC28A1-204ENST00000538177 DOT1LQ8TEK3 1739 aa13.54□□□□□ -0.24
SLC28A1-204ENST00000538177 NRAPQ86VF7 1730 aa13.54□□□□□ -0.24
SLC28A1-204ENST00000538177 STK3Q13188 491 aa13.54□□□□□ -0.24
SLC28A1-204ENST00000538177 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
SLC28A1-204ENST00000538177 CNNM1Q9NRU3 951 aa13.54□□□□□ -0.24
SLC28A1-204ENST00000538177 CCDC87Q9NVE4 849 aa13.54□□□□□ -0.24
SLC28A1-204ENST00000538177 SPATA31A5Q5VU36 1347 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms