RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 IGHMBP2P38935 993 aaKnown RBP27.24■■□□□ 1.95
CCDC78-215ENST00000538176 EPS15P42566 896 aa27.24■■□□□ 1.95
CCDC78-215ENST00000538176 DCAF8Q5TAQ9 597 aa27.24■■□□□ 1.95
CCDC78-215ENST00000538176 F6X3S4 739 aa27.23■■□□□ 1.95
CCDC78-215ENST00000538176 RIMBP2O15034 1052 aa27.23■■□□□ 1.95
CCDC78-215ENST00000538176 RAD17O75943 681 aa27.23■■□□□ 1.95
CCDC78-215ENST00000538176 UFL1O94874 794 aa27.23■■□□□ 1.95
CCDC78-215ENST00000538176 ITGBL1O95965 494 aaPredicted RBP27.23■■□□□ 1.95
CCDC78-215ENST00000538176 CNTROBQ8N137 903 aa27.23■■□□□ 1.95
CCDC78-215ENST00000538176 PASKQ96RG2 1323 aa27.22■■□□□ 1.95
CCDC78-215ENST00000538176 DPF2Q92785 391 aa27.22■■□□□ 1.95
CCDC78-215ENST00000538176 YDJCA8MPS7 323 aa27.21■■□□□ 1.95
CCDC78-215ENST00000538176 CT47B1P0C2W7 299 aaPredicted RBP27.21■■□□□ 1.95
CCDC78-215ENST00000538176 GMPSP49915 693 aaPredicted RBP27.21■■□□□ 1.95
CCDC78-215ENST00000538176 HTRA3P83110 453 aa27.21■■□□□ 1.95
CCDC78-215ENST00000538176 DBNDD1Q9H9R9 158 aa27.21■■□□□ 1.95
CCDC78-215ENST00000538176 PTPRCP08575 1304 aa27.2■■□□□ 1.95
CCDC78-215ENST00000538176 H7C1D1 291 aa27.2■■□□□ 1.94
CCDC78-215ENST00000538176 ECE2O60344 883 aa27.2■■□□□ 1.94
CCDC78-215ENST00000538176 ITGA6P23229 1130 aa27.2■■□□□ 1.94
CCDC78-215ENST00000538176 RPS12P25398 132 aaKnown RBP27.2■■□□□ 1.94
CCDC78-215ENST00000538176 LTBP1Q14766 1721 aa27.2■■□□□ 1.94
CCDC78-215ENST00000538176 MPHOSPH8Q99549 860 aa27.2■■□□□ 1.94
CCDC78-215ENST00000538176 SRCIN1Q9C0H9 1055 aa27.2■■□□□ 1.94
CCDC78-215ENST00000538176 C9orf78Q9NZ63 289 aaPredicted RBP27.2■■□□□ 1.94
CCDC78-215ENST00000538176 MINPP1Q9UNW1 487 aa27.2■■□□□ 1.94
CCDC78-215ENST00000538176 ADAMTSL1Q8N6G6 1762 aa27.2■■□□□ 1.94
CCDC78-215ENST00000538176 GRM8O00222 908 aa27.19■■□□□ 1.94
CCDC78-215ENST00000538176 ALDH1L2Q3SY69 923 aa27.19■■□□□ 1.94
CCDC78-215ENST00000538176 JMYQ8N9B5 988 aa27.19■■□□□ 1.94
CCDC78-215ENST00000538176 ZC3H15Q8WU90 426 aaKnown RBP27.19■■□□□ 1.94
CCDC78-215ENST00000538176 ANKRD2Q9GZV1 360 aa27.19■■□□□ 1.94
CCDC78-215ENST00000538176 COL4A1P02462 1669 aa27.18■■□□□ 1.94
CCDC78-215ENST00000538176 ANKRD18BA2A2Z9 1011 aa27.18■■□□□ 1.94
CCDC78-215ENST00000538176 SLC4A10Q6U841 1118 aa27.18■■□□□ 1.94
CCDC78-215ENST00000538176 TRMT2AQ8IZ69 625 aaKnown RBP27.18■■□□□ 1.94
CCDC78-215ENST00000538176 MRPL50Q8N5N7 158 aaKnown RBP27.18■■□□□ 1.94
CCDC78-215ENST00000538176 CNOT7Q9UIV1 285 aaKnown RBP27.18■■□□□ 1.94
CCDC78-215ENST00000538176 LEMD3Q9Y2U8 911 aa27.18■■□□□ 1.94
CCDC78-215ENST00000538176 TMEM88BA6NKF7 163 aa27.17■■□□□ 1.94
CCDC78-215ENST00000538176 DOK7Q18PE1 504 aa27.17■■□□□ 1.94
CCDC78-215ENST00000538176 MAP1SQ66K74 1059 aaPredicted RBP27.17■■□□□ 1.94
CCDC78-215ENST00000538176 PODNQ7Z5L7 613 aa27.17■■□□□ 1.94
CCDC78-215ENST00000538176 PSMD14O00487 310 aa27.16■■□□□ 1.94
CCDC78-215ENST00000538176 IFIT5Q13325 482 aaKnown RBP27.16■■□□□ 1.94
CCDC78-215ENST00000538176 CCT4P50991 539 aaKnown RBP27.15■■□□□ 1.94
CCDC78-215ENST00000538176 PGAP2Q9UHJ9 254 aa27.15■■□□□ 1.94
CCDC78-215ENST00000538176 VIL1P09327 827 aaKnown RBP27.14■■□□□ 1.94
CCDC78-215ENST00000538176 FOXO4P98177 505 aa27.14■■□□□ 1.94
CCDC78-215ENST00000538176 FAM161AQ3B820 660 aa27.14■■□□□ 1.94
CCDC78-215ENST00000538176 SSH1Q8WYL5 1049 aa27.13■■□□□ 1.93
CCDC78-215ENST00000538176 CDCA7LQ96GN5 454 aa27.13■■□□□ 1.93
CCDC78-215ENST00000538176 MED23Q9ULK4 1368 aa27.12■■□□□ 1.93
CCDC78-215ENST00000538176 CCDC57Q2TAC2 916 aa27.12■■□□□ 1.93
CCDC78-215ENST00000538176 MICALL2Q8IY33 904 aa27.12■■□□□ 1.93
CCDC78-215ENST00000538176 GPR101Q96P66 508 aaPredicted RBP27.12■■□□□ 1.93
CCDC78-215ENST00000538176 DIEXFQ68CQ4 756 aaKnown RBP27.11■■□□□ 1.93
CCDC78-215ENST00000538176 AGBL3Q8NEM8 1001 aa27.11■■□□□ 1.93
CCDC78-215ENST00000538176 ZBTB12Q9Y330 459 aaPredicted RBP27.11■■□□□ 1.93
CCDC78-215ENST00000538176 LMBR1LQ6UX01 489 aa27.1■■□□□ 1.93
CCDC78-215ENST00000538176 CHMP3Q9Y3E7 222 aa27.1■■□□□ 1.93
CCDC78-215ENST00000538176 UTYO14607 1347 aa27.1■■□□□ 1.93
CCDC78-215ENST00000538176 COA1Q9GZY4 146 aa27.09■■□□□ 1.93
CCDC78-215ENST00000538176 KCNQ5Q9NR82 932 aa27.09■■□□□ 1.93
CCDC78-215ENST00000538176 ZNF804BA4D1E1 1349 aa27.09■■□□□ 1.93
CCDC78-215ENST00000538176 ZNF609O15014 1411 aa27.07■■□□□ 1.92
CCDC78-215ENST00000538176 USP17L3A6NCW0 530 aa27.07■■□□□ 1.92
CCDC78-215ENST00000538176 USP17L4A6NCW7 530 aa27.07■■□□□ 1.92
CCDC78-215ENST00000538176 KCNJ4P48050 445 aa27.07■■□□□ 1.92
CCDC78-215ENST00000538176 MMP14P50281 582 aa27.07■■□□□ 1.92
CCDC78-215ENST00000538176 BRPF1P55201 1214 aaPredicted RBP27.07■■□□□ 1.92
CCDC78-215ENST00000538176 CHRNDQ07001 517 aa27.07■■□□□ 1.92
CCDC78-215ENST00000538176 TAF7LQ5H9L4 462 aa27.07■■□□□ 1.92
CCDC78-215ENST00000538176 RSBN1LQ6PCB5 846 aaPredicted RBP27.07■■□□□ 1.92
CCDC78-215ENST00000538176 CDC37L1Q7L3B6 337 aa27.07■■□□□ 1.92
CCDC78-215ENST00000538176 USP17L1Q7RTZ2 530 aa27.07■■□□□ 1.92
CCDC78-215ENST00000538176 SMC4Q9NTJ3 1288 aa27.07■■□□□ 1.92
CCDC78-215ENST00000538176 HIRAP54198 1017 aaPredicted RBP27.06■■□□□ 1.92
CCDC78-215ENST00000538176 LDHAL6AQ6ZMR3 332 aa27.05■■□□□ 1.92
CCDC78-215ENST00000538176 CNTNAP1P78357 1384 aa27.05■■□□□ 1.92
CCDC78-215ENST00000538176 NBPF7P0C2Y1 421 aaPredicted RBP27.04■■□□□ 1.92
CCDC78-215ENST00000538176 EPHA10Q5JZY3 1008 aa27.04■■□□□ 1.92
CCDC78-215ENST00000538176 MKRN1Q9UHC7 482 aaKnown RBP27.04■■□□□ 1.92
CCDC78-215ENST00000538176 DEFB115Q30KQ5 88 aa27.03■■□□□ 1.92
CCDC78-215ENST00000538176 STRIP1Q5VSL9 837 aa27.03■■□□□ 1.92
CCDC78-215ENST00000538176 C15orf52Q6ZUT6 534 aaKnown RBP27.03■■□□□ 1.92
CCDC78-215ENST00000538176 SAMD7Q7Z3H4 446 aa27.03■■□□□ 1.92
CCDC78-215ENST00000538176 TRPM4Q8TD43 1214 aa27.03■■□□□ 1.92
CCDC78-215ENST00000538176 MYO3BQ8WXR4 1341 aa27.03■■□□□ 1.92
CCDC78-215ENST00000538176 SPEF2Q9C093 1822 aa27.03■■□□□ 1.92
CCDC78-215ENST00000538176 RASSF10A6NK89 507 aa27.02■■□□□ 1.92
CCDC78-215ENST00000538176 CNNM1Q9NRU3 951 aa27.02■■□□□ 1.92
CCDC78-215ENST00000538176 SCN9AQ15858 1988 aa27.01■■□□□ 1.91
CCDC78-215ENST00000538176 USP17L8P0C7I0 530 aa27.01■■□□□ 1.91
CCDC78-215ENST00000538176 ZNF280AP59817 542 aaPredicted RBP27.01■■□□□ 1.91
CCDC78-215ENST00000538176 MIER1Q8N108 512 aa27.01■■□□□ 1.91
CCDC78-215ENST00000538176 DCPSQ96C86 337 aaKnown RBP27.01■■□□□ 1.91
CCDC78-215ENST00000538176 SUCLG2Q96I99 432 aa27.01■■□□□ 1.91
CCDC78-215ENST00000538176 ABT1Q9ULW3 272 aaKnown RBP27.01■■□□□ 1.91
CCDC78-215ENST00000538176 HDAC5Q9UQL6 1122 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms