RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 MASTLQ96GX5 879 aa10.03□□□□□ -0.8
CIT-209ENST00000538073 RBM17Q96I25 401 aaKnown RBP10.03□□□□□ -0.8
CIT-209ENST00000538073 CRAMP1Q96RY5 1269 aa10.03□□□□□ -0.8
CIT-209ENST00000538073 FHDC1Q9C0D6 1143 aaPredicted RBP10.03□□□□□ -0.8
CIT-209ENST00000538073 SEC31BQ9NQW1 1179 aa10.03□□□□□ -0.8
CIT-209ENST00000538073 PCDHB15Q9Y5E8 787 aa10.03□□□□□ -0.8
CIT-209ENST00000538073 UTRNP46939 3433 aa10.03□□□□□ -0.8
CIT-209ENST00000538073 SRGAP3O43295 1099 aa10.02□□□□□ -0.81
CIT-209ENST00000538073 ATMINO43313 823 aaPredicted RBP10.02□□□□□ -0.81
CIT-209ENST00000538073 DPEP1P16444 411 aa10.02□□□□□ -0.81
CIT-209ENST00000538073 ALDH1B1P30837 517 aa10.02□□□□□ -0.81
CIT-209ENST00000538073 IFIT5Q13325 482 aaKnown RBP10.02□□□□□ -0.81
CIT-209ENST00000538073 CCDC57Q2TAC2 916 aa10.02□□□□□ -0.81
CIT-209ENST00000538073 ERICH6BQ5W0A0 696 aa10.02□□□□□ -0.81
CIT-209ENST00000538073 DDX46Q7L014 1031 aaKnown RBP10.02□□□□□ -0.81
CIT-209ENST00000538073 CCDC85AQ96PX6 553 aaPredicted RBP10.02□□□□□ -0.81
CIT-209ENST00000538073 PPP1R1BQ9UD71 204 aaPredicted RBP10.02□□□□□ -0.81
CIT-209ENST00000538073 LRRC37AA6NMS7 1700 aa10.02□□□□□ -0.81
CIT-209ENST00000538073 SPEF2Q9C093 1822 aa10.01□□□□□ -0.81
CIT-209ENST00000538073 A0A0G2JLW4 131 aa10.01□□□□□ -0.81
CIT-209ENST00000538073 ANKRD18BA2A2Z9 1011 aa10.01□□□□□ -0.81
CIT-209ENST00000538073 C7P10643 843 aa10.01□□□□□ -0.81
CIT-209ENST00000538073 PTPN12Q05209 780 aaKnown RBP10.01□□□□□ -0.81
CIT-209ENST00000538073 GRAPQ13588 217 aa10.01□□□□□ -0.81
CIT-209ENST00000538073 NLGN2Q8NFZ4 835 aa10.01□□□□□ -0.81
CIT-209ENST00000538073 GRAPLQ8TC17 118 aaPredicted RBP10.01□□□□□ -0.81
CIT-209ENST00000538073 CELF1Q92879 486 aaKnown RBP10.01□□□□□ -0.81
CIT-209ENST00000538073 CNKSR1Q969H4 720 aa10.01□□□□□ -0.81
CIT-209ENST00000538073 CDC5LQ99459 802 aaKnown RBP10.01□□□□□ -0.81
CIT-209ENST00000538073 SYT17Q9BSW7 474 aa10.01□□□□□ -0.81
CIT-209ENST00000538073 COPRSQ9NQ92 184 aa10.01□□□□□ -0.81
CIT-209ENST00000538073 CHMP3Q9Y3E7 222 aa10.01□□□□□ -0.81
CIT-209ENST00000538073 CACNA1SQ13698 1873 aa10.01□□□□□ -0.81
CIT-209ENST00000538073 SLX4Q8IY92 1834 aa10□□□□□ -0.81
CIT-209ENST00000538073 BBOX1O75936 387 aa10□□□□□ -0.81
CIT-209ENST00000538073 RPS8P62241 208 aaKnown RBP10□□□□□ -0.81
CIT-209ENST00000538073 KLHL34Q8N239 644 aa10□□□□□ -0.81
CIT-209ENST00000538073 ZNF594Q96JF6 807 aaPredicted RBP10□□□□□ -0.81
CIT-209ENST00000538073 FBXO3Q9UK99 471 aa10□□□□□ -0.81
CIT-209ENST00000538073 A0A1B0GUL6 1792 aa9.99□□□□□ -0.81
CIT-209ENST00000538073 ARFGEF1Q9Y6D6 1849 aa9.99□□□□□ -0.81
CIT-209ENST00000538073 HMMRO75330 724 aa9.99□□□□□ -0.81
CIT-209ENST00000538073 HDAC1Q13547 482 aaPredicted RBP9.99□□□□□ -0.81
CIT-209ENST00000538073 PRPF40BQ6NWY9 871 aaKnown RBP9.99□□□□□ -0.81
CIT-209ENST00000538073 TMC4Q7Z404 712 aa9.99□□□□□ -0.81
CIT-209ENST00000538073 ANKRD18AQ8IVF6 992 aa9.99□□□□□ -0.81
CIT-209ENST00000538073 TTLL6Q8N841 843 aa9.99□□□□□ -0.81
CIT-209ENST00000538073 KLHDC4Q8TBB5 520 aa9.99□□□□□ -0.81
CIT-209ENST00000538073 ZNF622Q969S3 477 aaKnown RBP eCLIP9.99□□□□□ -0.818e-7■■□□□ 12.4
CIT-209ENST00000538073 TSPYL2Q9H2G4 693 aaPredicted RBP9.99□□□□□ -0.81
CIT-209ENST00000538073 BSDC1Q9NW68 430 aaPredicted RBP9.99□□□□□ -0.81
CIT-209ENST00000538073 PIM2Q9P1W9 311 aa9.99□□□□□ -0.81
CIT-209ENST00000538073 PA2G4Q9UQ80 394 aaKnown RBP9.99□□□□□ -0.81
CIT-209ENST00000538073 NOP58Q9Y2X3 529 aaKnown RBP9.99□□□□□ -0.81
CIT-209ENST00000538073 LTBP1Q14766 1721 aa9.99□□□□□ -0.81
CIT-209ENST00000538073 PPEF1O14829 653 aaPredicted RBP9.98□□□□□ -0.81
CIT-209ENST00000538073 CIAO1O76071 339 aa9.98□□□□□ -0.81
CIT-209ENST00000538073 IGHMBP2P38935 993 aaKnown RBP9.98□□□□□ -0.81
CIT-209ENST00000538073 ATG9AQ7Z3C6 839 aa9.98□□□□□ -0.81
CIT-209ENST00000538073 SP8Q8IXZ3 490 aa9.98□□□□□ -0.81
CIT-209ENST00000538073 C7orf43Q8WVR3 580 aa9.98□□□□□ -0.81
CIT-209ENST00000538073 PUS3Q9BZE2 481 aaKnown RBP9.98□□□□□ -0.81
CIT-209ENST00000538073 RIPOR2Q9Y4F9 1068 aa9.98□□□□□ -0.81
CIT-209ENST00000538073 SNED1Q8TER0 1413 aa9.98□□□□□ -0.81
CIT-209ENST00000538073 EYA2O00167 538 aa9.97□□□□□ -0.81
CIT-209ENST00000538073 POTEJP0CG39 1038 aa9.97□□□□□ -0.81
CIT-209ENST00000538073 IL15P40933 162 aaPredicted RBP9.97□□□□□ -0.81
CIT-209ENST00000538073 LRRC24Q50LG9 513 aa9.97□□□□□ -0.81
CIT-209ENST00000538073 DALRD3Q5D0E6 543 aaKnown RBP9.97□□□□□ -0.81
CIT-209ENST00000538073 TAF7LQ5H9L4 462 aa9.97□□□□□ -0.81
CIT-209ENST00000538073 LDHAL6AQ6ZMR3 332 aa9.97□□□□□ -0.81
CIT-209ENST00000538073 MAMSTRQ6ZN01 415 aa9.97□□□□□ -0.81
CIT-209ENST00000538073 MPHOSPH8Q99549 860 aa9.97□□□□□ -0.81
CIT-209ENST00000538073 DCTPP1Q9H773 170 aa9.97□□□□□ -0.81
CIT-209ENST00000538073 ATP6V0A2Q9Y487 856 aa9.97□□□□□ -0.81
CIT-209ENST00000538073 SURF6O75683 361 aaKnown RBP9.96□□□□□ -0.82
CIT-209ENST00000538073 IGHDP01880 384 aa9.96□□□□□ -0.82
CIT-209ENST00000538073 CC2D2BQ6DHV5 1058 aa9.96□□□□□ -0.82
CIT-209ENST00000538073 SLC51AQ86UW1 340 aa9.96□□□□□ -0.82
CIT-209ENST00000538073 VGLL2Q8N8G2 317 aa9.96□□□□□ -0.82
CIT-209ENST00000538073 SIL1Q9H173 461 aa9.96□□□□□ -0.82
CIT-209ENST00000538073 RWDD1Q9H446 243 aaPredicted RBP9.96□□□□□ -0.82
CIT-209ENST00000538073 CNNM1Q9NRU3 951 aa9.96□□□□□ -0.82
CIT-209ENST00000538073 PODXL2Q9NZ53 605 aa9.96□□□□□ -0.82
CIT-209ENST00000538073 MINPP1Q9UNW1 487 aa9.96□□□□□ -0.82
CIT-209ENST00000538073 FER1L6Q2WGJ9 1857 aa9.96□□□□□ -0.82
CIT-209ENST00000538073 GOLGB1Q14789 3259 aaKnown RBP9.95□□□□□ -0.82
CIT-209ENST00000538073 SASH1O94885 1247 aa9.95□□□□□ -0.82
CIT-209ENST00000538073 CHRNDQ07001 517 aa9.95□□□□□ -0.82
CIT-209ENST00000538073 G3BP1Q13283 466 aaKnown RBP eCLIP9.95□□□□□ -0.82
CIT-209ENST00000538073 GRIPAP1Q4V328 841 aa9.95□□□□□ -0.82
CIT-209ENST00000538073 HSP90AB4PQ58FF6 505 aa9.95□□□□□ -0.82
CIT-209ENST00000538073 SMC5Q8IY18 1101 aa9.95□□□□□ -0.82
CIT-209ENST00000538073 EXOC6BQ9Y2D4 811 aa9.95□□□□□ -0.82
CIT-209ENST00000538073 MROH5Q6ZUA9 1318 aa9.95□□□□□ -0.82
CIT-209ENST00000538073 DUOX1Q9NRD9 1551 aa9.95□□□□□ -0.82
CIT-209ENST00000538073 KDM2BQ8NHM5 1336 aa9.94□□□□□ -0.82
CIT-209ENST00000538073 C21orf2O43822 256 aa9.94□□□□□ -0.82
CIT-209ENST00000538073 RAB11FIP3O75154 756 aa9.94□□□□□ -0.82
CIT-209ENST00000538073 PDE8BO95263 885 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms