RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 ANKIB1Q9P2G1 1089 aa12.45□□□□□ -0.42
CHD4-207ENST00000537634 TLL2Q9Y6L7 1015 aa12.45□□□□□ -0.42
CHD4-207ENST00000537634 SHTN1A0MZ66 631 aa12.44□□□□□ -0.42
CHD4-207ENST00000537634 G3V3G9 751 aa12.44□□□□□ -0.42
CHD4-207ENST00000537634 UFL1O94874 794 aa12.44□□□□□ -0.42
CHD4-207ENST00000537634 RPS12P25398 132 aaKnown RBP12.44□□□□□ -0.42
CHD4-207ENST00000537634 HIRAP54198 1017 aaPredicted RBP12.44□□□□□ -0.42
CHD4-207ENST00000537634 DOK7Q18PE1 504 aa12.44□□□□□ -0.42
CHD4-207ENST00000537634 TWISTNBQ3B726 338 aaPredicted RBP12.44□□□□□ -0.42
CHD4-207ENST00000537634 DCAF8Q5TAQ9 597 aa12.44□□□□□ -0.42
CHD4-207ENST00000537634 KSR2Q6VAB6 950 aa12.44□□□□□ -0.42
CHD4-207ENST00000537634 CDC37L1Q7L3B6 337 aa12.44□□□□□ -0.42
CHD4-207ENST00000537634 WWC1Q8IX03 1113 aa12.44□□□□□ -0.42
CHD4-207ENST00000537634 DPF2Q92785 391 aa12.44□□□□□ -0.42
CHD4-207ENST00000537634 GPR101Q96P66 508 aaPredicted RBP12.44□□□□□ -0.42
CHD4-207ENST00000537634 CCDC85AQ96PX6 553 aaPredicted RBP12.44□□□□□ -0.42
CHD4-207ENST00000537634 ZC3H12CQ9C0D7 883 aaKnown RBP12.44□□□□□ -0.42
CHD4-207ENST00000537634 PODXL2Q9NZ53 605 aa12.44□□□□□ -0.42
CHD4-207ENST00000537634 PGAP2Q9UHJ9 254 aa12.44□□□□□ -0.42
CHD4-207ENST00000537634 GGA1Q9UJY5 639 aa12.44□□□□□ -0.42
CHD4-207ENST00000537634 ZBTB12Q9Y330 459 aaPredicted RBP12.44□□□□□ -0.42
CHD4-207ENST00000537634 PI4KAP2A4QPH2 592 aa12.43□□□□□ -0.42
CHD4-207ENST00000537634 ZEB1P37275 1124 aaPredicted RBP12.43□□□□□ -0.42
CHD4-207ENST00000537634 CTSWP56202 376 aa12.43□□□□□ -0.42
CHD4-207ENST00000537634 CYP4F22Q6NT55 531 aa12.43□□□□□ -0.42
CHD4-207ENST00000537634 ANKRD18AQ8IVF6 992 aa12.43□□□□□ -0.42
CHD4-207ENST00000537634 PI4KAP1Q8N8J0 262 aa12.43□□□□□ -0.42
CHD4-207ENST00000537634 ZNF408Q9H9D4 720 aa12.43□□□□□ -0.42
CHD4-207ENST00000537634 MRS2Q9HD23 443 aa12.43□□□□□ -0.42
CHD4-207ENST00000537634 SPEF2Q9C093 1822 aa12.43□□□□□ -0.42
CHD4-207ENST00000537634 SCN9AQ15858 1988 aa12.43□□□□□ -0.42
CHD4-207ENST00000537634 RTL9Q8NET4 1388 aa12.43□□□□□ -0.42
CHD4-207ENST00000537634 XDHP47989 1333 aa12.42□□□□□ -0.42
CHD4-207ENST00000537634 IL16Q14005 1332 aa12.42□□□□□ -0.42
CHD4-207ENST00000537634 ANP32CO43423 234 aa12.42□□□□□ -0.42
CHD4-207ENST00000537634 IGKV5-2P06315 115 aa12.42□□□□□ -0.42
CHD4-207ENST00000537634 LBX1P52954 281 aa12.42□□□□□ -0.42
CHD4-207ENST00000537634 TBC1D10BQ4KMP7 808 aaPredicted RBP12.42□□□□□ -0.42
CHD4-207ENST00000537634 SAMD7Q7Z3H4 446 aa12.42□□□□□ -0.42
CHD4-207ENST00000537634 SAPCD2Q86UD0 394 aa12.42□□□□□ -0.42
CHD4-207ENST00000537634 CDC5LQ99459 802 aaKnown RBP12.42□□□□□ -0.42
CHD4-207ENST00000537634 BEGAINQ9BUH8 593 aa12.42□□□□□ -0.42
CHD4-207ENST00000537634 PSME4Q14997 1843 aa12.41□□□□□ -0.42
CHD4-207ENST00000537634 CWF19L2Q2TBE0 894 aaKnown RBP12.41□□□□□ -0.42
CHD4-207ENST00000537634 KCNQ5Q9NR82 932 aa12.41□□□□□ -0.42
CHD4-207ENST00000537634 CACNA1FO60840 1977 aa12.4□□□□□ -0.42
CHD4-207ENST00000537634 NEURL1BA8MQ27 555 aa12.4□□□□□ -0.42
CHD4-207ENST00000537634 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
CHD4-207ENST00000537634 HSPA8P11142 646 aaKnown RBP12.4□□□□□ -0.42
CHD4-207ENST00000537634 KIF4BQ2VIQ3 1234 aa12.4□□□□□ -0.42
CHD4-207ENST00000537634 NCBP3Q53F19 620 aaKnown RBP12.4□□□□□ -0.42
CHD4-207ENST00000537634 RBM26Q5T8P6 1007 aaKnown RBP12.4□□□□□ -0.42
CHD4-207ENST00000537634 UBE3BQ7Z3V4 1068 aa12.4□□□□□ -0.42
CHD4-207ENST00000537634 KRT26Q7Z3Y9 468 aa12.4□□□□□ -0.42
CHD4-207ENST00000537634 USP48Q86UV5 1035 aa12.4□□□□□ -0.42
CHD4-207ENST00000537634 DCPSQ96C86 337 aaKnown RBP12.4□□□□□ -0.42
CHD4-207ENST00000537634 HHIPL1Q96JK4 782 aa12.4□□□□□ -0.42
CHD4-207ENST00000537634 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
CHD4-207ENST00000537634 EGFRP00533 1210 aa12.39□□□□□ -0.43
CHD4-207ENST00000537634 VIL1P09327 827 aaKnown RBP12.39□□□□□ -0.43
CHD4-207ENST00000537634 ATP2B4P23634 1241 aa12.39□□□□□ -0.43
CHD4-207ENST00000537634 MAP2K2P36507 400 aa12.39□□□□□ -0.43
CHD4-207ENST00000537634 FLIIQ13045 1269 aa12.39□□□□□ -0.43
CHD4-207ENST00000537634 G2E3Q7L622 706 aa12.39□□□□□ -0.43
CHD4-207ENST00000537634 TTLL11Q8NHH1 800 aa12.39□□□□□ -0.43
CHD4-207ENST00000537634 GREM2Q9H772 168 aa12.39□□□□□ -0.43
CHD4-207ENST00000537634 ZNF609O15014 1411 aa12.38□□□□□ -0.43
CHD4-207ENST00000537634 POLR2AP24928 1970 aaKnown RBP12.38□□□□□ -0.43
CHD4-207ENST00000537634 AOC2O75106 756 aa12.38□□□□□ -0.43
CHD4-207ENST00000537634 FKBP5Q13451 457 aaPredicted RBP12.38□□□□□ -0.43
CHD4-207ENST00000537634 AGBL3Q8NEM8 1001 aa12.38□□□□□ -0.43
CHD4-207ENST00000537634 MYH16Q9H6N6 1097 aa12.38□□□□□ -0.43
CHD4-207ENST00000537634 BSDC1Q9NW68 430 aaPredicted RBP12.38□□□□□ -0.43
CHD4-207ENST00000537634 SALL2Q9Y467 1007 aaPredicted RBP12.38□□□□□ -0.43
CHD4-207ENST00000537634 ZNF316A6NFI3 1004 aaPredicted RBP12.37□□□□□ -0.43
CHD4-207ENST00000537634 ADM5C9JUS6 153 aa12.37□□□□□ -0.43
CHD4-207ENST00000537634 H7C1W4 665 aa12.37□□□□□ -0.43
CHD4-207ENST00000537634 IGHMBP2P38935 993 aaKnown RBP12.37□□□□□ -0.43
CHD4-207ENST00000537634 HUNKP57058 714 aa12.37□□□□□ -0.43
CHD4-207ENST00000537634 GCKRQ14397 625 aa12.37□□□□□ -0.43
CHD4-207ENST00000537634 RSBN1LQ6PCB5 846 aaPredicted RBP12.37□□□□□ -0.43
CHD4-207ENST00000537634 PODNQ7Z5L7 613 aa12.37□□□□□ -0.43
CHD4-207ENST00000537634 WDR63Q8IWG1 891 aa12.37□□□□□ -0.43
CHD4-207ENST00000537634 SULF1Q8IWU6 871 aa12.37□□□□□ -0.43
CHD4-207ENST00000537634 DNAAF4Q8WXU2 420 aa12.37□□□□□ -0.43
CHD4-207ENST00000537634 GGA3Q9NZ52 723 aa12.37□□□□□ -0.43
CHD4-207ENST00000537634 MED23Q9ULK4 1368 aa12.37□□□□□ -0.43
CHD4-207ENST00000537634 USP17L3A6NCW0 530 aa12.36□□□□□ -0.43
CHD4-207ENST00000537634 USP17L4A6NCW7 530 aa12.36□□□□□ -0.43
CHD4-207ENST00000537634 CA12O43570 354 aa12.36□□□□□ -0.43
CHD4-207ENST00000537634 BRPF1P55201 1214 aaPredicted RBP12.36□□□□□ -0.43
CHD4-207ENST00000537634 DLK2Q6UY11 383 aa12.36□□□□□ -0.43
CHD4-207ENST00000537634 USP17L1Q7RTZ2 530 aa12.36□□□□□ -0.43
CHD4-207ENST00000537634 C2orf69Q8N8R5 385 aa12.36□□□□□ -0.43
CHD4-207ENST00000537634 GBA2Q9HCG7 927 aaPredicted RBP12.36□□□□□ -0.43
CHD4-207ENST00000537634 MINPP1Q9UNW1 487 aa12.36□□□□□ -0.43
CHD4-207ENST00000537634 VAMP4O75379 141 aa12.35□□□□□ -0.43
CHD4-207ENST00000537634 USP17L8P0C7I0 530 aa12.35□□□□□ -0.43
CHD4-207ENST00000537634 CCT4P50991 539 aaKnown RBP12.35□□□□□ -0.43
CHD4-207ENST00000537634 ZNF280AP59817 542 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms