RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 NLRP13Q86W25 1043 aa8.73□□□□□ -1.01
SRGAP1-203ENST00000537585 SSBP4Q9BWG4 385 aaPredicted RBP8.73□□□□□ -1.01
SRGAP1-203ENST00000537585 SERPINA10Q9UK55 444 aa8.73□□□□□ -1.01
SRGAP1-203ENST00000537585 USP21Q9UK80 565 aa8.73□□□□□ -1.01
SRGAP1-203ENST00000537585 C9orf172C9J069 976 aa8.72□□□□□ -1.01
SRGAP1-203ENST00000537585 FBXO11Q86XK2 927 aa8.72□□□□□ -1.01
SRGAP1-203ENST00000537585 STIM2Q9P246 746 aa8.72□□□□□ -1.01
SRGAP1-203ENST00000537585 A6NHS1 94 aa8.71□□□□□ -1.02
SRGAP1-203ENST00000537585 TMEM88BA6NKF7 163 aa8.71□□□□□ -1.02
SRGAP1-203ENST00000537585 PTCD1O75127 700 aaKnown RBP8.71□□□□□ -1.02
SRGAP1-203ENST00000537585 HOXD8P13378 290 aaPredicted RBP8.71□□□□□ -1.02
SRGAP1-203ENST00000537585 NOS3P29474 1203 aa8.71□□□□□ -1.02
SRGAP1-203ENST00000537585 MTMR3Q13615 1198 aa8.71□□□□□ -1.02
SRGAP1-203ENST00000537585 PCSK7Q16549 785 aa8.71□□□□□ -1.02
SRGAP1-203ENST00000537585 TTC9Q92623 222 aa8.71□□□□□ -1.02
SRGAP1-203ENST00000537585 ALX3O95076 343 aa8.7□□□□□ -1.02
SRGAP1-203ENST00000537585 SOX18P35713 384 aa8.7□□□□□ -1.02
SRGAP1-203ENST00000537585 IREB2P48200 963 aaKnown RBP8.7□□□□□ -1.02
SRGAP1-203ENST00000537585 PRSS36Q5K4E3 855 aa8.7□□□□□ -1.02
SRGAP1-203ENST00000537585 OR13H1Q8NG92 308 aa8.7□□□□□ -1.02
SRGAP1-203ENST00000537585 TMEM63CQ9P1W3 806 aa8.7□□□□□ -1.02
SRGAP1-203ENST00000537585 DLL1O00548 723 aa8.69□□□□□ -1.02
SRGAP1-203ENST00000537585 ACPPP15309 386 aa8.69□□□□□ -1.02
SRGAP1-203ENST00000537585 ZMYM1Q5SVZ6 1142 aa8.69□□□□□ -1.02
SRGAP1-203ENST00000537585 TXNDC11Q6PKC3 985 aa8.69□□□□□ -1.02
SRGAP1-203ENST00000537585 IL22RA1Q8N6P7 574 aa8.69□□□□□ -1.02
SRGAP1-203ENST00000537585 WFDC12Q8WWY7 111 aa8.69□□□□□ -1.02
SRGAP1-203ENST00000537585 PIK3R5Q8WYR1 880 aa8.69□□□□□ -1.02
SRGAP1-203ENST00000537585 TP53INP1Q96A56 240 aa8.69□□□□□ -1.02
SRGAP1-203ENST00000537585 MEGF10Q96KG7 1140 aa8.69□□□□□ -1.02
SRGAP1-203ENST00000537585 GHRHP01286 108 aa8.68□□□□□ -1.02
SRGAP1-203ENST00000537585 NUDT16Q96DE0 195 aaKnown RBP8.68□□□□□ -1.02
SRGAP1-203ENST00000537585 CNTN3Q9P232 1028 aa8.68□□□□□ -1.02
SRGAP1-203ENST00000537585 KANSL3Q9P2N6 904 aa8.68□□□□□ -1.02
SRGAP1-203ENST00000537585 SETDB1Q15047 1291 aa8.67□□□□□ -1.02
SRGAP1-203ENST00000537585 DTWD1Q8N5C7 304 aa8.67□□□□□ -1.02
SRGAP1-203ENST00000537585 LACRTQ9GZZ8 138 aa8.67□□□□□ -1.02
SRGAP1-203ENST00000537585 RASSF4Q9H2L5 321 aa8.67□□□□□ -1.02
SRGAP1-203ENST00000537585 MPSTP25325 297 aa8.66□□□□□ -1.02
SRGAP1-203ENST00000537585 CDC25BP30305 580 aa8.66□□□□□ -1.02
SRGAP1-203ENST00000537585 AGGF1Q8N302 714 aaeCLIP8.66□□□□□ -1.02
SRGAP1-203ENST00000537585 GALNT11Q8NCW6 608 aa8.66□□□□□ -1.02
SRGAP1-203ENST00000537585 EDEM1Q92611 657 aa8.66□□□□□ -1.02
SRGAP1-203ENST00000537585 GGNBP2Q9H3C7 697 aa8.66□□□□□ -1.02
SRGAP1-203ENST00000537585 TM4SF5O14894 197 aa8.65□□□□□ -1.02
SRGAP1-203ENST00000537585 ARID4AP29374 1257 aaPredicted RBP8.65□□□□□ -1.02
SRGAP1-203ENST00000537585 PHLDB3Q6NSJ2 640 aa8.65□□□□□ -1.02
SRGAP1-203ENST00000537585 HELQQ8TDG4 1101 aa8.65□□□□□ -1.02
SRGAP1-203ENST00000537585 TRPA1O75762 1119 aa8.64□□□□□ -1.03
SRGAP1-203ENST00000537585 WISP1O95388 367 aa8.64□□□□□ -1.03
SRGAP1-203ENST00000537585 ABTB2Q8N961 1025 aa8.64□□□□□ -1.03
SRGAP1-203ENST00000537585 GTF3C2Q8WUA4 911 aaPredicted RBP8.64□□□□□ -1.03
SRGAP1-203ENST00000537585 HHIPQ96QV1 700 aa8.64□□□□□ -1.03
SRGAP1-203ENST00000537585 CARD10Q9BWT7 1032 aa8.64□□□□□ -1.03
SRGAP1-203ENST00000537585 ABI2Q9NYB9 513 aaPredicted RBP8.64□□□□□ -1.03
SRGAP1-203ENST00000537585 KCNK4Q9NYG8 393 aa8.64□□□□□ -1.03
SRGAP1-203ENST00000537585 LINC01387J3KSC0 135 aa8.63□□□□□ -1.03
SRGAP1-203ENST00000537585 KIF4AO95239 1232 aa8.63□□□□□ -1.03
SRGAP1-203ENST00000537585 SSFA2P28290 1259 aa8.63□□□□□ -1.03
SRGAP1-203ENST00000537585 DNM1Q05193 864 aaKnown RBP8.63□□□□□ -1.03
SRGAP1-203ENST00000537585 CEP135Q66GS9 1140 aa8.63□□□□□ -1.03
SRGAP1-203ENST00000537585 IGF2-ASQ6U949 168 aa8.63□□□□□ -1.03
SRGAP1-203ENST00000537585 ELP3Q9H9T3 547 aa8.63□□□□□ -1.03
SRGAP1-203ENST00000537585 SH2B1Q9NRF2 756 aaPredicted RBP8.63□□□□□ -1.03
SRGAP1-203ENST00000537585 PDGFAP04085 211 aa8.62□□□□□ -1.03
SRGAP1-203ENST00000537585 H2AFB1P0C5Y9 115 aa8.62□□□□□ -1.03
SRGAP1-203ENST00000537585 H2AFB2P0C5Z0 115 aa8.62□□□□□ -1.03
SRGAP1-203ENST00000537585 EIF1AXP47813 144 aaKnown RBP8.62□□□□□ -1.03
SRGAP1-203ENST00000537585 HYAL2Q12891 473 aa8.62□□□□□ -1.03
SRGAP1-203ENST00000537585 TTC39BQ5VTQ0 682 aaPredicted RBP8.62□□□□□ -1.03
SRGAP1-203ENST00000537585 C1orf127Q8N9H9 656 aa8.62□□□□□ -1.03
SRGAP1-203ENST00000537585 CHRDQ9H2X0 955 aa8.62□□□□□ -1.03
SRGAP1-203ENST00000537585 F8W735 103 aaPredicted RBP8.61□□□□□ -1.03
SRGAP1-203ENST00000537585 EPHA1P21709 976 aa8.61□□□□□ -1.03
SRGAP1-203ENST00000537585 ZNF438Q7Z4V0 828 aa8.61□□□□□ -1.03
SRGAP1-203ENST00000537585 CEP120Q8N960 986 aa8.61□□□□□ -1.03
SRGAP1-203ENST00000537585 ANO2Q9NQ90 1003 aa8.61□□□□□ -1.03
SRGAP1-203ENST00000537585 DDX3YO15523 660 aaKnown RBP8.6□□□□□ -1.03
SRGAP1-203ENST00000537585 POP1Q99575 1024 aaKnown RBP8.6□□□□□ -1.03
SRGAP1-203ENST00000537585 RBSNQ9H1K0 784 aa8.6□□□□□ -1.03
SRGAP1-203ENST00000537585 FAM13BQ9NYF5 915 aa8.6□□□□□ -1.03
SRGAP1-203ENST00000537585 PBX4Q9BYU1 374 aa8.59□□□□□ -1.03
SRGAP1-203ENST00000537585 AKTIPQ9H8T0 292 aa8.59□□□□□ -1.03
SRGAP1-203ENST00000537585 FNDC3AQ9Y2H6 1198 aaKnown RBP8.59□□□□□ -1.03
SRGAP1-203ENST00000537585 PPME1Q9Y570 386 aa8.59□□□□□ -1.03
SRGAP1-203ENST00000537585 SCO2A0A1W2PP80 73 aa8.58□□□□□ -1.04
SRGAP1-203ENST00000537585 ADAM11O75078 769 aa8.58□□□□□ -1.04
SRGAP1-203ENST00000537585 ZNF211Q13398 564 aaPredicted RBP8.58□□□□□ -1.04
SRGAP1-203ENST00000537585 NOM1Q5C9Z4 860 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-203ENST00000537585 NCAPG2Q86XI2 1143 aa8.58□□□□□ -1.04
SRGAP1-203ENST00000537585 POLIQ9UNA4 740 aa8.58□□□□□ -1.04
SRGAP1-203ENST00000537585 NFKBIEO00221 500 aa8.57□□□□□ -1.04
SRGAP1-203ENST00000537585 C8orf34Q49A92 452 aa8.57□□□□□ -1.04
SRGAP1-203ENST00000537585 HGSNATQ68CP4 663 aa8.57□□□□□ -1.04
SRGAP1-203ENST00000537585 PDE12Q6L8Q7 609 aaKnown RBP8.57□□□□□ -1.04
SRGAP1-203ENST00000537585 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.57□□□□□ -1.04
SRGAP1-203ENST00000537585 DZIP1LQ8IYY4 767 aaKnown RBP8.57□□□□□ -1.04
SRGAP1-203ENST00000537585 SALL4Q9UJQ4 1053 aa8.57□□□□□ -1.04
SRGAP1-203ENST00000537585 CDC27P30260 824 aa8.56□□□□□ -1.04
SRGAP1-203ENST00000537585 Q6ZS46 218 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms