RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 METTL24Q5JXM2 366 aa19.31■□□□□ 0.68
SFSWAP-206ENST00000537582 TSHZ3Q63HK5 1081 aa19.31■□□□□ 0.68
SFSWAP-206ENST00000537582 ZBTB47Q9UFB7 747 aaPredicted RBP19.31■□□□□ 0.68
SFSWAP-206ENST00000537582 WTIPA6NIX2 430 aaPredicted RBP19.3■□□□□ 0.68
SFSWAP-206ENST00000537582 SNAP23O00161 211 aa19.3■□□□□ 0.68
SFSWAP-206ENST00000537582 TAF5LO75529 589 aa19.3■□□□□ 0.68
SFSWAP-206ENST00000537582 VGLL2Q8N8G2 317 aa19.3■□□□□ 0.68
SFSWAP-206ENST00000537582 RBM17Q96I25 401 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-206ENST00000537582 TNNI3KQ59H18 835 aa19.29■□□□□ 0.68
SFSWAP-206ENST00000537582 AACSQ86V21 672 aa19.29■□□□□ 0.68
SFSWAP-206ENST00000537582 CCDC8Q9H0W5 538 aaPredicted RBP19.29■□□□□ 0.68
SFSWAP-206ENST00000537582 BSDC1Q9NW68 430 aaPredicted RBP19.29■□□□□ 0.68
SFSWAP-206ENST00000537582 FBXO3Q9UK99 471 aa19.29■□□□□ 0.68
SFSWAP-206ENST00000537582 FPGT-TNNI3KV9GXZ4 949 aa19.29■□□□□ 0.68
SFSWAP-206ENST00000537582 SALL3Q9BXA9 1300 aa19.29■□□□□ 0.68
SFSWAP-206ENST00000537582 NPR1P16066 1061 aa19.28■□□□□ 0.68
SFSWAP-206ENST00000537582 CHRNDQ07001 517 aa19.28■□□□□ 0.68
SFSWAP-206ENST00000537582 PLEKHM2Q8IWE5 1019 aa19.28■□□□□ 0.68
SFSWAP-206ENST00000537582 CLASRPQ8N2M8 674 aaKnown RBP19.28■□□□□ 0.68
SFSWAP-206ENST00000537582 ZNF622Q969S3 477 aaKnown RBP eCLIP19.28■□□□□ 0.68
SFSWAP-206ENST00000537582 CRAMP1Q96RY5 1269 aa19.28■□□□□ 0.68
SFSWAP-206ENST00000537582 CEP126Q9P2H0 1117 aa19.28■□□□□ 0.68
SFSWAP-206ENST00000537582 MINPP1Q9UNW1 487 aa19.28■□□□□ 0.68
SFSWAP-206ENST00000537582 ZNF609O15014 1411 aa19.28■□□□□ 0.68
SFSWAP-206ENST00000537582 TIMM10P62072 90 aa19.27■□□□□ 0.68
SFSWAP-206ENST00000537582 H0YIN7 160 aa19.27■□□□□ 0.67
SFSWAP-206ENST00000537582 OLFM4Q6UX06 510 aa19.27■□□□□ 0.67
SFSWAP-206ENST00000537582 MASTLQ96GX5 879 aa19.27■□□□□ 0.67
SFSWAP-206ENST00000537582 MROH5Q6ZUA9 1318 aa19.26■□□□□ 0.67
SFSWAP-206ENST00000537582 A0A0G2JLW4 131 aa19.26■□□□□ 0.67
SFSWAP-206ENST00000537582 ADORA1P30542 326 aa19.26■□□□□ 0.67
SFSWAP-206ENST00000537582 KLHL34Q8N239 644 aa19.26■□□□□ 0.67
SFSWAP-206ENST00000537582 DBNDD2Q9BQY9 259 aa19.26■□□□□ 0.67
SFSWAP-206ENST00000537582 PPP1R1BQ9UD71 204 aaPredicted RBP19.26■□□□□ 0.67
SFSWAP-206ENST00000537582 DBNLQ9UJU6 430 aaKnown RBP19.26■□□□□ 0.67
SFSWAP-206ENST00000537582 A0A1B0GUL6 1792 aa19.25■□□□□ 0.67
SFSWAP-206ENST00000537582 KIF13BQ9NQT8 1826 aa19.25■□□□□ 0.67
SFSWAP-206ENST00000537582 A0A1B0GUL7 405 aa19.25■□□□□ 0.67
SFSWAP-206ENST00000537582 PDE8BO95263 885 aa19.25■□□□□ 0.67
SFSWAP-206ENST00000537582 DPEP1P16444 411 aa19.25■□□□□ 0.67
SFSWAP-206ENST00000537582 KIAA1551Q9HCM1 1747 aa19.24■□□□□ 0.67
SFSWAP-206ENST00000537582 PPEF1O14829 653 aaPredicted RBP19.24■□□□□ 0.67
SFSWAP-206ENST00000537582 IFIT2P09913 472 aaKnown RBP19.24■□□□□ 0.67
SFSWAP-206ENST00000537582 MX1P20591 662 aa19.24■□□□□ 0.67
SFSWAP-206ENST00000537582 PDE1AP54750 535 aa19.24■□□□□ 0.67
SFSWAP-206ENST00000537582 ATP2B3Q16720 1220 aa19.24■□□□□ 0.67
SFSWAP-206ENST00000537582 NEUROD6Q96NK8 337 aa19.24■□□□□ 0.67
SFSWAP-206ENST00000537582 KCNA3P22001 575 aa19.23■□□□□ 0.67
SFSWAP-206ENST00000537582 STYK1Q6J9G0 422 aa19.23■□□□□ 0.67
SFSWAP-206ENST00000537582 SPON1Q9HCB6 807 aa19.23■□□□□ 0.67
SFSWAP-206ENST00000537582 GPR108Q9NPR9 543 aa19.23■□□□□ 0.67
SFSWAP-206ENST00000537582 WWC3Q9ULE0 1092 aa19.23■□□□□ 0.67
SFSWAP-206ENST00000537582 SOCS7O14512 581 aa19.23■□□□□ 0.67
SFSWAP-206ENST00000537582 BBOX1O75936 387 aa19.23■□□□□ 0.67
SFSWAP-206ENST00000537582 FGFR2P21802 821 aa19.23■□□□□ 0.67
SFSWAP-206ENST00000537582 ZNF219Q9P2Y4 722 aaPredicted RBP19.23■□□□□ 0.67
SFSWAP-206ENST00000537582 CACNA1SQ13698 1873 aa19.22■□□□□ 0.67
SFSWAP-206ENST00000537582 KLRK1P26718 216 aa19.22■□□□□ 0.67
SFSWAP-206ENST00000537582 GPSM2P81274 684 aa19.22■□□□□ 0.67
SFSWAP-206ENST00000537582 PUM3Q15397 648 aaKnown RBP19.22■□□□□ 0.67
SFSWAP-206ENST00000537582 PRPF40BQ6NWY9 871 aaKnown RBP19.22■□□□□ 0.67
SFSWAP-206ENST00000537582 GSPT1P15170 499 aaKnown RBP19.21■□□□□ 0.67
SFSWAP-206ENST00000537582 ALDH1B1P30837 517 aa19.21■□□□□ 0.67
SFSWAP-206ENST00000537582 XAGE2Q96GT9 111 aa19.21■□□□□ 0.67
SFSWAP-206ENST00000537582 GPR101Q96P66 508 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-206ENST00000537582 STAP2Q9UGK3 403 aa19.21■□□□□ 0.67
SFSWAP-206ENST00000537582 AKAP2Q9Y2D5 859 aa19.21■□□□□ 0.67
SFSWAP-206ENST00000537582 DLEC1Q9Y238 1755 aa19.21■□□□□ 0.67
SFSWAP-206ENST00000537582 SLX4Q8IY92 1834 aa19.21■□□□□ 0.67
SFSWAP-206ENST00000537582 PI4K2BQ8TCG2 481 aa19.2■□□□□ 0.66
SFSWAP-206ENST00000537582 ATP6V0A2Q9Y487 856 aa19.2■□□□□ 0.66
SFSWAP-206ENST00000537582 LRRC37AA6NMS7 1700 aa19.2■□□□□ 0.66
SFSWAP-206ENST00000537582 SP8Q8IXZ3 490 aa19.19■□□□□ 0.66
SFSWAP-206ENST00000537582 NLGN2Q8NFZ4 835 aa19.19■□□□□ 0.66
SFSWAP-206ENST00000537582 LPIN2Q92539 896 aa19.19■□□□□ 0.66
SFSWAP-206ENST00000537582 CNKSR1Q969H4 720 aa19.19■□□□□ 0.66
SFSWAP-206ENST00000537582 ANKRD2Q9GZV1 360 aa19.19■□□□□ 0.66
SFSWAP-206ENST00000537582 OSBPL3Q9H4L5 887 aa19.19■□□□□ 0.66
SFSWAP-206ENST00000537582 ECHDC1Q9NTX5 307 aa19.19■□□□□ 0.66
SFSWAP-206ENST00000537582 ANKIB1Q9P2G1 1089 aa19.19■□□□□ 0.66
SFSWAP-206ENST00000537582 NSFL1CQ9UNZ2 370 aaKnown RBP19.19■□□□□ 0.66
SFSWAP-206ENST00000537582 GOLGB1Q14789 3259 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-206ENST00000537582 MAP4K4O95819 1239 aaPredicted RBP19.18■□□□□ 0.66
SFSWAP-206ENST00000537582 TTC22Q5TAA0 569 aa19.18■□□□□ 0.66
SFSWAP-206ENST00000537582 CD2APQ9Y5K6 639 aa19.18■□□□□ 0.66
SFSWAP-206ENST00000537582 ARAP2Q8WZ64 1704 aa19.17■□□□□ 0.66
SFSWAP-206ENST00000537582 XDHP47989 1333 aa19.17■□□□□ 0.66
SFSWAP-206ENST00000537582 SLC5A1P13866 664 aa19.17■□□□□ 0.66
SFSWAP-206ENST00000537582 TGFB2P61812 414 aa19.17■□□□□ 0.66
SFSWAP-206ENST00000537582 C7orf43Q8WVR3 580 aa19.17■□□□□ 0.66
SFSWAP-206ENST00000537582 NDUFB9Q9Y6M9 179 aa19.17■□□□□ 0.66
SFSWAP-206ENST00000537582 LTBP1Q14766 1721 aa19.16■□□□□ 0.66
SFSWAP-206ENST00000537582 ZNF804BA4D1E1 1349 aa19.16■□□□□ 0.66
SFSWAP-206ENST00000537582 TTC41PQ6P2S7 1318 aa19.16■□□□□ 0.66
SFSWAP-206ENST00000537582 DUOX1Q9NRD9 1551 aa19.16■□□□□ 0.66
SFSWAP-206ENST00000537582 PHKA1P46020 1223 aa19.16■□□□□ 0.66
SFSWAP-206ENST00000537582 KCNJ4P48050 445 aa19.16■□□□□ 0.66
SFSWAP-206ENST00000537582 TXNRD3Q86VQ6 643 aa19.16■□□□□ 0.66
SFSWAP-206ENST00000537582 SRCAPQ6ZRS2 3230 aa19.16■□□□□ 0.66
SFSWAP-206ENST00000537582 IRS2Q9Y4H2 1338 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms