RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 EXOC4Q96A65 974 aa13.41□□□□□ -0.26
POLR1B-216ENST00000537335 HNRNPMP52272 730 aaKnown RBP eCLIP13.4□□□□□ -0.26
POLR1B-216ENST00000537335 HSP90AA4PQ58FG1 418 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 MORC4Q8TE76 937 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 UBLCP1Q8WVY7 318 aaPredicted RBP13.4□□□□□ -0.26
POLR1B-216ENST00000537335 SECISBP2LQ93073 1101 aaKnown RBP13.4□□□□□ -0.26
POLR1B-216ENST00000537335 MCUR1Q96AQ8 359 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 CCDC97Q96F63 343 aaPredicted RBP13.4□□□□□ -0.26
POLR1B-216ENST00000537335 IMPACTQ9P2X3 320 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 CTDP1Q9Y5B0 961 aaPredicted RBP13.4□□□□□ -0.26
POLR1B-216ENST00000537335 EIF4G1Q04637 1599 aaKnown RBP13.4□□□□□ -0.26
POLR1B-216ENST00000537335 CEP104O60308 925 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 ALDH1L2Q3SY69 923 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 SOGA3Q5TF21 947 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 WWC2Q6AWC2 1192 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 PLVAPQ9BX97 442 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 CAPS2Q9BXY5 557 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 SEC24BO95487 1268 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
POLR1B-216ENST00000537335 EFCAB8A8MWE9 144 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 PHLDB3Q6NSJ2 640 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 KIAA1524Q8TCG1 905 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 SH3GL3Q99963 347 aa13.4□□□□□ -0.26
POLR1B-216ENST00000537335 MTRF1LQ9UGC7 380 aaKnown RBP13.4□□□□□ -0.26
POLR1B-216ENST00000537335 FHOD3Q2V2M9 1422 aa13.39□□□□□ -0.27
POLR1B-216ENST00000537335 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
POLR1B-216ENST00000537335 DESP17661 470 aa13.39□□□□□ -0.27
POLR1B-216ENST00000537335 ZGPATQ8N5A5 531 aaKnown RBP13.39□□□□□ -0.27
POLR1B-216ENST00000537335 PYM1Q9BRP8 204 aaKnown RBP13.39□□□□□ -0.27
POLR1B-216ENST00000537335 NUCB1Q02818 461 aa13.39□□□□□ -0.27
POLR1B-216ENST00000537335 GRIPAP1Q4V328 841 aa13.39□□□□□ -0.27
POLR1B-216ENST00000537335 CNGA4Q8IV77 575 aa13.39□□□□□ -0.27
POLR1B-216ENST00000537335 E2F5Q15329 346 aa13.39□□□□□ -0.27
POLR1B-216ENST00000537335 APBB1IPQ7Z5R6 666 aaPredicted RBP13.39□□□□□ -0.27
POLR1B-216ENST00000537335 ARMC2Q8NEN0 867 aa13.39□□□□□ -0.27
POLR1B-216ENST00000537335 CCDC42Q96M95 316 aa13.39□□□□□ -0.27
POLR1B-216ENST00000537335 EID1Q9Y6B2 187 aa13.39□□□□□ -0.27
POLR1B-216ENST00000537335 DNAJC8O75937 253 aaPredicted RBP13.38□□□□□ -0.27
POLR1B-216ENST00000537335 ATP5DP30049 168 aa13.38□□□□□ -0.27
POLR1B-216ENST00000537335 TTF2Q9UNY4 1162 aaKnown RBP13.38□□□□□ -0.27
POLR1B-216ENST00000537335 NUTM2DQ5VT03 806 aaPredicted RBP13.38□□□□□ -0.27
POLR1B-216ENST00000537335 RASEFQ8IZ41 740 aa13.38□□□□□ -0.27
POLR1B-216ENST00000537335 MINK1Q8N4C8 1332 aaPredicted RBP13.38□□□□□ -0.27
POLR1B-216ENST00000537335 CREB3O43889 395 aa13.38□□□□□ -0.27
POLR1B-216ENST00000537335 C8orf74Q6P047 294 aa13.38□□□□□ -0.27
POLR1B-216ENST00000537335 CLTAP09496 248 aa13.38□□□□□ -0.27
POLR1B-216ENST00000537335 RASSF2P50749 326 aa13.38□□□□□ -0.27
POLR1B-216ENST00000537335 SF3B2Q13435 895 aaKnown RBP13.38□□□□□ -0.27
POLR1B-216ENST00000537335 TTC39AQ5SRH9 613 aa13.38□□□□□ -0.27
POLR1B-216ENST00000537335 EFCAB2Q5VUJ9 269 aa13.38□□□□□ -0.27
POLR1B-216ENST00000537335 ZSCAN25Q6NSZ9 544 aa13.38□□□□□ -0.27
POLR1B-216ENST00000537335 SND1Q7KZF4 910 aaKnown RBP eCLIP13.38□□□□□ -0.27
POLR1B-216ENST00000537335 TSC22D3Q99576 134 aa13.38□□□□□ -0.27
POLR1B-216ENST00000537335 AKR1B15C9JRZ8 316 aaPredicted RBP13.37□□□□□ -0.27
POLR1B-216ENST00000537335 TXNDC9O14530 226 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 ARHGAP6O43182 974 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 CCDC122Q5T0U0 273 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 CROCCP2Q86T23 111 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 IFT20Q8IY31 132 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
POLR1B-216ENST00000537335 PRPHP41219 470 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 RAD51AP2Q09MP3 1159 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 TRIM47Q96LD4 638 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 RAB3IPQ96QF0 476 aaPredicted RBP13.37□□□□□ -0.27
POLR1B-216ENST00000537335 LMBRD1Q9NUN5 540 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 STK38LQ9Y2H1 464 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 CTNNA2P26232 953 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 HSP90AA5PQ58FG0 334 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 SREK1Q8WXA9 508 aaKnown RBP13.37□□□□□ -0.27
POLR1B-216ENST00000537335 ABTB1Q969K4 478 aaPredicted RBP13.37□□□□□ -0.27
POLR1B-216ENST00000537335 CHUKO15111 745 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 PRC1O43663 620 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 TRIM27P14373 513 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 IRX1P78414 480 aaPredicted RBP13.37□□□□□ -0.27
POLR1B-216ENST00000537335 SATB1Q01826 763 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 CCDC92Q53HC0 331 aaPredicted RBP13.37□□□□□ -0.27
POLR1B-216ENST00000537335 LMBR1Q8WVP7 490 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 SUFUQ9UMX1 484 aa13.37□□□□□ -0.27
POLR1B-216ENST00000537335 PSMC4P43686 418 aa13.36□□□□□ -0.27
POLR1B-216ENST00000537335 POLE2P56282 527 aa13.36□□□□□ -0.27
POLR1B-216ENST00000537335 CCT2P78371 535 aaKnown RBP13.36□□□□□ -0.27
POLR1B-216ENST00000537335 PPANQ9NQ55 473 aaKnown RBP13.36□□□□□ -0.27
POLR1B-216ENST00000537335 USP16Q9Y5T5 823 aa13.36□□□□□ -0.27
POLR1B-216ENST00000537335 RTL1A6NKG5 1358 aa13.36□□□□□ -0.27
POLR1B-216ENST00000537335 TPD52P55327 224 aaPredicted RBP13.36□□□□□ -0.27
POLR1B-216ENST00000537335 GPRASP1Q5JY77 1395 aa13.36□□□□□ -0.27
POLR1B-216ENST00000537335 GOLGA8KD6RF30 607 aa13.36□□□□□ -0.27
POLR1B-216ENST00000537335 IDEP14735 1019 aa13.36□□□□□ -0.27
POLR1B-216ENST00000537335 GKAP1Q5VSY0 366 aaPredicted RBP13.36□□□□□ -0.27
POLR1B-216ENST00000537335 PCDHB15Q9Y5E8 787 aa13.36□□□□□ -0.27
POLR1B-216ENST00000537335 OPHN1O60890 802 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 GAS2L3Q86XJ1 694 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 VPS52Q8N1B4 723 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 FBXO18Q8NFZ0 1043 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 RMND1Q9NWS8 449 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 FGD6Q6ZV73 1430 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 RUSC2Q8N2Y8 1516 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 MYL5Q02045 173 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 MAP7D1Q3KQU3 841 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 TADA2BQ86TJ2 420 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms